Cow genome map

Conread name: Ss1.1-rpigcf0_007044.5

Conread position: 1-153
Cow position: chr20:36023172-36023326 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 1-253
Cow position: chr20:26723453-26723699 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 52

Conread position: 5-372
Cow position: chr20:5636700-5636340 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 54

Conread position: 11-372
Cow position: chr20:6603254-6602901 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 240
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 8, 12

Conread position: 11-372
Cow position: chr20:12995795-12996148 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 21, 9

Conread position: 14-352
Cow position: chr20:6890919-6890592 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 281, 28

Conread position: 17-366
Cow position: chr20:11542073-11542417 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 173

Conread position: 17-371
Cow position: chr20:9537340-9536995 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 194, 66

Conread position: 18-372
Cow position: chr20:17846166-17845819 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 11, 34

Conread position: 18-372
Cow position: chr20:21714965-21714613 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 232
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 131, 71

Conread position: 22-278
Cow position: chr20:10772407-10772154 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 191, 5

Conread position: 22-372
Cow position: chr20:23870614-23870956 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 225
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 200, 152

Conread position: 25-372
Cow position: chr20:5827140-5826797 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 203, 51

Conread position: 26-267
Cow position: chr20:40158099-40157862 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 27-371
Cow position: chr20:15565630-15565970 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 267, 25

Conread position: 28-324
Cow position: chr20:39266759-39267055 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 131

Conread position: 28-366
Cow position: chr20:36634011-36633679 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 216
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 277, 114

Conread position: 28-372
Cow position: chr20:23064638-23064969 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 221
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 30-370
Cow position: chr20:38551564-38551233 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 219
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 269, 13

Conread position: 32-372
Cow position: chr20:28067230-28067566 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 183, 19

Conread position: 32-372
Cow position: chr20:38578571-38578897 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 196, 37

Conread position: 33-370
Cow position: chr20:1576290-1575956 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 221
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 5

Conread position: 33-372
Cow position: chr20:6238445-6238787 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 220
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 48

Conread position: 35-291
Cow position: chr20:22030506-22030258 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 182, 7

Conread position: 37-280
Cow position: chr20:38514968-38514730 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 66, 0

Conread position: 37-372
Cow position: chr20:11481949-11482279 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 30

Conread position: 41-370
Cow position: chr20:33532488-33532170 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 212
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 49

Conread position: 42-372
Cow position: chr20:580737-581061 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 190, 34

Conread position: 42-372
Cow position: chr20:3320961-3321278 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 212
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 42-372
Cow position: chr20:31740040-31740358 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 41

Conread position: 42-372
Cow position: chr20:39518189-39517863 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 284, 59

Conread position: 43-370
Cow position: chr20:6096313-6096629 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 43-371
Cow position: chr20:9412671-9412353 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 43-372
Cow position: chr20:23846482-23846812 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 33

Conread position: 44-372
Cow position: chr20:21345614-21345266 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 48

Conread position: 46-255
Cow position: chr20:21815740-21815534 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 192, 30

Conread position: 46-292
Cow position: chr20:16548096-16548341 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 180

Conread position: 46-293
Cow position: chr20:38090092-38089847 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 34

Conread position: 46-304
Cow position: chr20:5078808-5078548 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 169
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 172, 0

Conread position: 46-324
Cow position: chr20:20099422-20099692 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 144, 28

Conread position: 46-350
Cow position: chr20:28594468-28594162 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 196
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 70

Conread position: 46-369
Cow position: chr20:41089616-41089931 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 216
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 128, 42

Conread position: 46-372
Cow position: chr20:10200525-10200207 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 60, 39

Conread position: 47-269
Cow position: chr20:8619973-8620197 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 154, 18

Conread position: 47-370
Cow position: chr20:7426019-7426327 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 29

Conread position: 47-372
Cow position: chr20:19751483-19751169 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 49-228
Cow position: chr20:3148860-3148684 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 49-325
Cow position: chr20:23286160-23286420 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 38

Conread position: 50-218
Cow position: chr20:15530035-15529870 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 50-255
Cow position: chr20:19060664-19060866 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 117, 26

Conread position: 50-322
Cow position: chr20:2819720-2819449 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 202, 145

Conread position: 50-324
Cow position: chr20:18379553-18379286 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 174, 17

Conread position: 50-343
Cow position: chr20:7441963-7442242 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 276, 26

Conread position: 50-345
Cow position: chr20:24069981-24069687 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 27

Conread position: 50-347
Cow position: chr20:32463349-32463640 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 24

Conread position: 50-353
Cow position: chr20:34097778-34098083 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 115, 35

Conread position: 50-360
Cow position: chr20:12581780-12582080 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 25

Conread position: 50-369
Cow position: chr20:38872825-38873149 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 29

Conread position: 50-372
Cow position: chr20:5998487-5998804 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 235

Conread position: 50-372
Cow position: chr20:6240344-6240669 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 287, 75

Conread position: 50-372
Cow position: chr20:8578427-8578104 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 178

Conread position: 50-372
Cow position: chr20:11550542-11550227 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 27

Conread position: 50-372
Cow position: chr20:14980331-14980655 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 26

Conread position: 50-372
Cow position: chr20:27407718-27408018 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 104, 25

Conread position: 51-371
Cow position: chr20:30710463-30710789 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 152, 32

Conread position: 51-372
Cow position: chr20:3141747-3141443 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 248, 41

Conread position: 54-246
Cow position: chr20:5702895-5702704 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 179, 22

Conread position: 54-287
Cow position: chr20:17100534-17100302 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 166, 27

Conread position: 54-324
Cow position: chr20:7738058-7738322 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 151, 0

Conread position: 54-343
Cow position: chr20:28982872-28982584 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 23

Conread position: 54-357
Cow position: chr20:398136-398431 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 169, 22

Conread position: 54-368
Cow position: chr20:22485032-22484724 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 22

Conread position: 54-370
Cow position: chr20:14879962-14879649 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 57

Conread position: 54-370
Cow position: chr20:28605382-28605067 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 24

Conread position: 54-372
Cow position: chr20:3255208-3254909 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 22

Conread position: 54-372
Cow position: chr20:13269788-13269483 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 79

Conread position: 54-372
Cow position: chr20:15568778-15569090 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 203
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 245, 45

Conread position: 54-372
Cow position: chr20:26996702-26996390 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 16

Conread position: 55-368
Cow position: chr20:25009462-25009779 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 19

Conread position: 55-372
Cow position: chr20:12420448-12420761 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 22

Conread position: 55-372
Cow position: chr20:16935144-16935443 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 271, 14

Conread position: 55-372
Cow position: chr20:22065236-22064930 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 165, 25

Conread position: 56-226
Cow position: chr20:20158307-20158138 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 154, 0

Conread position: 56-316
Cow position: chr20:32866027-32866275 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 158, 20

Conread position: 56-366
Cow position: chr20:34596928-34597233 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 19

Conread position: 56-367
Cow position: chr20:40177414-40177115 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 56-372
Cow position: chr20:12239510-12239820 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 12, 91

Conread position: 56-372
Cow position: chr20:20203388-20203076 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 32

Conread position: 57-202
Cow position: chr20:15766281-15766135 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 57-371
Cow position: chr20:38768293-38768592 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 57-372
Cow position: chr20:8556099-8556414 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 142

Conread position: 57-372
Cow position: chr20:15312837-15312519 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 85, 18

Conread position: 58-316
Cow position: chr20:38868801-38868557 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 58-360
Cow position: chr20:7438681-7438984 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 260

Conread position: 58-366
Cow position: chr20:2298621-2298911 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 49

Conread position: 58-370
Cow position: chr20:31746468-31746763 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 148, 17

Conread position: 58-372
Cow position: chr20:4334362-4334660 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 59-363
Cow position: chr20:7363128-7362835 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 163, 21

Conread position: 59-368
Cow position: chr20:42458688-42458989 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 41

Conread position: 59-371
Cow position: chr20:17251883-17251568 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 34

Conread position: 59-372
Cow position: chr20:8702757-8703048 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 41

Conread position: 59-372
Cow position: chr20:39398647-39398348 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 60-366
Cow position: chr20:13025443-13025744 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 156

Conread position: 60-372
Cow position: chr20:10208973-10208662 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 104, 16

Conread position: 60-372
Cow position: chr20:13752391-13752100 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 15

Conread position: 60-372
Cow position: chr20:14759498-14759804 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 201
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 231, 146

Conread position: 65-273
Cow position: chr20:4786858-4787058 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 147, 11

Conread position: 65-372
Cow position: chr20:20242244-20241960 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 261, 11

Conread position: 66-365
Cow position: chr20:22978487-22978185 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 157, 9

Conread position: 66-370
Cow position: chr20:40511595-40511896 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 148, 129

Conread position: 66-372
Cow position: chr20:18320634-18320935 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 9

Conread position: 69-218
Cow position: chr20:24097159-24097010 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 71-372
Cow position: chr20:36207970-36207662 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 151, 239

Conread position: 72-372
Cow position: chr20:14807043-14806746 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 141

Conread position: 72-372
Cow position: chr20:33363672-33363380 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 145, 13

Conread position: 76-316
Cow position: chr20:26077517-26077745 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 133, 0

Conread position: 77-324
Cow position: chr20:35710326-35710076 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 31, 179

Conread position: 77-360
Cow position: chr20:19363213-19363496 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 141, 25

Conread position: 77-372
Cow position: chr20:22235462-22235175 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 137

Conread position: 78-368
Cow position: chr20:23792753-23792471 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 119

Conread position: 85-324
Cow position: chr20:22265110-22265341 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 85-358
Cow position: chr20:25161983-25162258 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 254

Conread position: 85-370
Cow position: chr20:28441469-28441188 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 240, 128

Conread position: 86-372
Cow position: chr20:6257919-6258204 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 21

Conread position: 88-372
Cow position: chr20:15235891-15235625 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 237, 68

Conread position: 89-294
Cow position: chr20:30888173-30887968 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 126

Conread position: 92-245
Cow position: chr20:1009571-1009722 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 95-372
Cow position: chr20:32083950-32084225 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 112, 55

Conread position: 100-371
Cow position: chr20:8308144-8307874 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 46

Conread position: 101-324
Cow position: chr20:19459539-19459757 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 135, 162

Conread position: 110-343
Cow position: chr20:38818117-38817891 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 215, 35

Conread position: 110-369
Cow position: chr20:33435038-33435304 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 228

Conread position: 110-370
Cow position: chr20:35797726-35797467 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 114, 36

Conread position: 110-372
Cow position: chr20:4206089-4205823 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 89, 220

Conread position: 110-372
Cow position: chr20:14572246-14572496 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 114

Conread position: 111-255
Cow position: chr20:6358736-6358588 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 111-360
Cow position: chr20:15548780-15549030 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 95, 174

Conread position: 111-364
Cow position: chr20:3606845-3607090 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 108, 38

Conread position: 116-372
Cow position: chr20:22313049-22313298 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 125

Conread position: 118-370
Cow position: chr20:38123997-38123748 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 161, 78

Conread position: 119-324
Cow position: chr20:23103331-23103124 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 119-371
Cow position: chr20:36010904-36010650 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 68

Conread position: 119-372
Cow position: chr20:11340696-11340945 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 30, 60

Conread position: 119-372
Cow position: chr20:31927354-31927598 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 62

Conread position: 119-372
Cow position: chr20:39325499-39325245 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 68

Conread position: 121-372
Cow position: chr20:7659107-7659355 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 40, 210

Conread position: 123-324
Cow position: chr20:24000693-24000895 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 89

Conread position: 123-370
Cow position: chr20:14012073-14011832 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 62

Conread position: 123-372
Cow position: chr20:7211144-7210896 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 203, 94

Conread position: 124-359
Cow position: chr20:40257073-40256837 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 109, 78

Conread position: 126-370
Cow position: chr20:39019797-39019557 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 80, 183

Conread position: 129-322
Cow position: chr20:34901670-34901475 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 130-305
Cow position: chr20:21204455-21204283 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 130-372
Cow position: chr20:23505925-23505688 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 88, 105

Conread position: 138-372
Cow position: chr20:14735758-14735536 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 201, 72

Conread position: 142-372
Cow position: chr20:13967171-13967398 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 187

Conread position: 147-370
Cow position: chr20:22704375-22704150 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 70, 193

Conread position: 161-347
Cow position: chr20:20312681-20312865 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 165, 49

Conread position: 165-372
Cow position: chr20:18618698-18618498 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 27

Conread position: 166-356
Cow position: chr20:3781362-3781554 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 182

Conread position: 170-372
Cow position: chr20:15593355-15593156 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 114

Conread position: 172-372
Cow position: chr20:24392034-24391840 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 167, 49

Conread position: 172-372
Cow position: chr20:31464324-31464521 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 11

Conread position: 185-372
Cow position: chr20:39247955-39247769 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 121

Conread position: 194-323
Cow position: chr20:39154824-39154695 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 124

Conread position: 194-372
Cow position: chr20:36331389-36331568 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 144

Conread position: 200-372
Cow position: chr20:10235884-10235712 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 38, 15

Conread position: 202-369
Cow position: chr20:18837130-18837298 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 124, 135

Conread position: 207-372
Cow position: chr20:22445616-22445775 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 216-353
Cow position: chr20:35407875-35407738 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 110, 121

Conread position: 221-372
Cow position: chr20:13994820-13994669 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 22

Conread position: 221-372
Cow position: chr20:19146882-19146730 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 117

Show alignments to all cow chromosomes.