• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_007044.5
        

               
Conread position:
               
1-254
               

               
Cow position:
               
chr22:26706632-26706880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr22:23855149-23854802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
4-158
               

               
Cow position:
               
chr22:531303-531456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr22:17294762-17295117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr22:34750847-34750491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
7-214
               

               
Cow position:
               
chr22:1977921-1977716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
10-323
               

               
Cow position:
               
chr22:31154122-31153815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
10-324
               

               
Cow position:
               
chr22:32895384-32895075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
10-370
               

               
Cow position:
               
chr22:26659213-26658866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr22:3965357-3964999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
315, 202
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr22:15338286-15337928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr22:23176272-23176631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
284, 33
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr22:3317292-3316949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
11-370
               

               
Cow position:
               
chr22:14881956-14882294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
11-372
               

               
Cow position:
               
chr22:43119561-43119915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 65
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr22:21235266-21235497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
12-367
               

               
Cow position:
               
chr22:22155770-22155419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
230, 68
               

               
Conread position:
               
12-370
               

               
Cow position:
               
chr22:28665453-28665085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
15-368
               

               
Cow position:
               
chr22:2216974-2216642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
202, 60
               

               
Conread position:
               
15-372
               

               
Cow position:
               
chr22:43291739-43292087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
290, 59
               

               
Conread position:
               
17-203
               

               
Cow position:
               
chr22:10324045-10323858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
18-366
               

               
Cow position:
               
chr22:3950415-3950066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
152, 128
               

               
Conread position:
               
18-372
               

               
Cow position:
               
chr22:8732400-8732744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 147
               

               
Conread position:
               
20-369
               

               
Cow position:
               
chr22:46567733-46568072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
21-372
               

               
Cow position:
               
chr22:13841298-13840951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
187, 54
               

               
Conread position:
               
22-280
               

               
Cow position:
               
chr22:34104515-34104773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
193, 53
               

               
Conread position:
               
23-321
               

               
Cow position:
               
chr22:30577671-30577384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
24-372
               

               
Cow position:
               
chr22:17764531-17764191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 52
               

               
Conread position:
               
26-363
               

               
Cow position:
               
chr22:32188699-32189021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
204, 191
               

               
Conread position:
               
28-221
               

               
Cow position:
               
chr22:23036318-23036124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
29-371
               

               
Cow position:
               
chr22:13300565-13300224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
30-303
               

               
Cow position:
               
chr22:43237256-43237528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
14, 174
               

               
Conread position:
               
30-372
               

               
Cow position:
               
chr22:1067762-1068102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
30-372
               

               
Cow position:
               
chr22:14924582-14924915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
30-372
               

               
Cow position:
               
chr22:23115156-23115491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
30-372
               

               
Cow position:
               
chr22:28071707-28071368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 43
               

               
Conread position:
               
30-372
               

               
Cow position:
               
chr22:35753154-35753493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 148
               

               
Conread position:
               
31-372
               

               
Cow position:
               
chr22:27431555-27431869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
32-190
               

               
Cow position:
               
chr22:22606373-22606216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
32-371
               

               
Cow position:
               
chr22:16044269-16044610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
32-372
               

               
Cow position:
               
chr22:4060799-4061132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
33-372
               

               
Cow position:
               
chr22:22223336-22223006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
34-255
               

               
Cow position:
               
chr22:1026034-1025814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
34-324
               

               
Cow position:
               
chr22:6961001-6960717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
34-371
               

               
Cow position:
               
chr22:25221752-25222088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
35-293
               

               
Cow position:
               
chr22:1871244-1870990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
187, 218
               

               
Conread position:
               
36-353
               

               
Cow position:
               
chr22:3250853-3251162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
37-320
               

               
Cow position:
               
chr22:31510237-31510506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
38-372
               

               
Cow position:
               
chr22:10338976-10339299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
172, 118
               

               
Conread position:
               
39-372
               

               
Cow position:
               
chr22:27274560-27274879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
287, 46
               

               
Conread position:
               
41-267
               

               
Cow position:
               
chr22:10553547-10553770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
187, 39
               

               
Conread position:
               
42-322
               

               
Cow position:
               
chr22:14245310-14245574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
164, 72
               

               
Conread position:
               
42-323
               

               
Cow position:
               
chr22:3316232-3315970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
42-372
               

               
Cow position:
               
chr22:8138127-8138444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
42-372
               

               
Cow position:
               
chr22:14690835-14691162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
42-372
               

               
Cow position:
               
chr22:16621318-16620987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 195
               

               
Conread position:
               
42-372
               

               
Cow position:
               
chr22:26339892-26339574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
191, 45
               

               
Conread position:
               
43-372
               

               
Cow position:
               
chr22:6494300-6493984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
12, 146
               

               
Conread position:
               
43-372
               

               
Cow position:
               
chr22:37029472-37029788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
174, 37
               

               
Conread position:
               
44-360
               

               
Cow position:
               
chr22:12967934-12968249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
255, 12
               

               
Conread position:
               
46-264
               

               
Cow position:
               
chr22:6176153-6176372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
169, 29
               

               
Conread position:
               
46-321
               

               
Cow position:
               
chr22:27066513-27066253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
166, 105
               

               
Conread position:
               
46-347
               

               
Cow position:
               
chr22:33447948-33448249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
182, 34
               

               
Conread position:
               
46-365
               

               
Cow position:
               
chr22:12389232-12388908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr22:5290985-5290657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr22:10303149-10302824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr22:18196642-18196323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
253, 39
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr22:18926489-18926165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
189, 39
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr22:32892829-32892509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
71, 182
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr22:34726798-34726486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
142, 30
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr22:36432841-36433156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 9
               

               
Conread position:
               
47-262
               

               
Cow position:
               
chr22:4315761-4315548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
47-262
               

               
Cow position:
               
chr22:9171540-9171325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
177, 29
               

               
Conread position:
               
47-324
               

               
Cow position:
               
chr22:40789697-40789427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
47-372
               

               
Cow position:
               
chr22:846039-845716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 232
               

               
Conread position:
               
49-196
               

               
Cow position:
               
chr22:16813926-16813783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
49-347
               

               
Cow position:
               
chr22:2623390-2623684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
275, 118
               

               
Conread position:
               
49-360
               

               
Cow position:
               
chr22:11131000-11130692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
181, 49
               

               
Conread position:
               
49-372
               

               
Cow position:
               
chr22:22613234-22612926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
164, 25
               

               
Conread position:
               
50-224
               

               
Cow position:
               
chr22:12902726-12902891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
155, 26
               

               
Conread position:
               
50-270
               

               
Cow position:
               
chr22:1983977-1983764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
50-273
               

               
Cow position:
               
chr22:24903721-24903498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
50-290
               

               
Cow position:
               
chr22:285237-285467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
50-318
               

               
Cow position:
               
chr22:15024979-15025245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
50-322
               

               
Cow position:
               
chr22:16094776-16095041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr22:45807962-45807699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr22:1035681-1035960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
50-363
               

               
Cow position:
               
chr22:23980079-23980394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
50-364
               

               
Cow position:
               
chr22:11601163-11600856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
50-368
               

               
Cow position:
               
chr22:41982589-41982897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr22:4119433-4119752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 25
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr22:12573333-12573019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
159, 37
               

               
Conread position:
               
50-371
               

               
Cow position:
               
chr22:10631519-10631187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 299
               

               
Conread position:
               
50-371
               

               
Cow position:
               
chr22:11613555-11613235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 147
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:1849205-1848878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:3987650-3987326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:4017602-4017289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:6720951-6721253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
168, 25
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:10162098-10161775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 200
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:10421162-10420845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:13957515-13957836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
174, 33
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:26786489-26786167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:37201978-37201671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:40120750-40121064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:41971024-41971343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
172, 38
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr22:44717850-44717524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
51-345
               

               
Cow position:
               
chr22:19173830-19173536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr22:8324363-8324059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
277, 24
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr22:8412659-8412338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr22:21295595-21295912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 95
               

               
Conread position:
               
52-370
               

               
Cow position:
               
chr22:16251444-16251751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
52-371
               

               
Cow position:
               
chr22:18259346-18259043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
54-203
               

               
Cow position:
               
chr22:21905595-21905450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
54-208
               

               
Cow position:
               
chr22:4164103-4163952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
54-221
               

               
Cow position:
               
chr22:33985678-33985838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
54-238
               

               
Cow position:
               
chr22:2100821-2101003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
54-252
               

               
Cow position:
               
chr22:12157716-12157913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 179
               

               
Conread position:
               
54-254
               

               
Cow position:
               
chr22:2109502-2109695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
54-267
               

               
Cow position:
               
chr22:14214239-14214448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
54-273
               

               
Cow position:
               
chr22:17652560-17652342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
165, 22
               

               
Conread position:
               
54-344
               

               
Cow position:
               
chr22:30818339-30818049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 45
               

               
Conread position:
               
54-360
               

               
Cow position:
               
chr22:30999015-30998718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 150
               

               
Conread position:
               
54-363
               

               
Cow position:
               
chr22:21568117-21567816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
54-364
               

               
Cow position:
               
chr22:877642-877333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
245, 272
               

               
Conread position:
               
54-368
               

               
Cow position:
               
chr22:38439031-38439340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 23
               

               
Conread position:
               
54-371
               

               
Cow position:
               
chr22:1289402-1289704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 93
               

               
Conread position:
               
54-371
               

               
Cow position:
               
chr22:3534058-3533761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
54-371
               

               
Cow position:
               
chr22:11147044-11146717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
54-371
               

               
Cow position:
               
chr22:28640025-28640339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
274, 24
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr22:534624-534307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
210, 31
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr22:6327642-6327962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr22:12313549-12313233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
161, 31
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr22:12803258-12803571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 247
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr22:15567892-15568204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 21
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr22:21012511-21012204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr22:22860787-22861098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr22:24066108-24066420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
152, 22
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr22:27171139-27171444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr22:33485494-33485793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
228, 22
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr22:43398127-43397831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
55-316
               

               
Cow position:
               
chr22:25387453-25387190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
159, 231
               

               
Conread position:
               
55-345
               

               
Cow position:
               
chr22:39507915-39508203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
55-357
               

               
Cow position:
               
chr22:15950262-15950554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
55-371
               

               
Cow position:
               
chr22:6215432-6215742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
168, 21
               

               
Conread position:
               
55-371
               

               
Cow position:
               
chr22:9127532-9127217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 25
               

               
Conread position:
               
55-372
               

               
Cow position:
               
chr22:4583683-4583369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
55-372
               

               
Cow position:
               
chr22:4993783-4994107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
55-372
               

               
Cow position:
               
chr22:18020908-18021211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
55-372
               

               
Cow position:
               
chr22:30049442-30049759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
56-294
               

               
Cow position:
               
chr22:37947846-37947611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
163, 20
               

               
Conread position:
               
56-324
               

               
Cow position:
               
chr22:17224547-17224806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
216, 19
               

               
Conread position:
               
56-364
               

               
Cow position:
               
chr22:4373167-4372863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
56-371
               

               
Cow position:
               
chr22:11370466-11370776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 30
               

               
Conread position:
               
56-371
               

               
Cow position:
               
chr22:27047288-27047585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 6
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr22:4563486-4563176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr22:10532623-10532308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
216, 20
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr22:17949848-17950143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr22:18838380-18838064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr22:20626963-20626655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
60, 157
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr22:23857170-23856862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr22:25361609-25361304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
166, 90
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr22:31646614-31646308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
154, 20
               

               
Conread position:
               
57-322
               

               
Cow position:
               
chr22:42635309-42635571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
162, 46
               

               
Conread position:
               
57-352
               

               
Cow position:
               
chr22:19827739-19828038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
57-362
               

               
Cow position:
               
chr22:10567592-10567880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr22:1591145-1590834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 18
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr22:7882674-7882364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
164, 12
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr22:10919733-10920050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr22:10936723-10937019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr22:21890234-21890546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr22:30094366-30094059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr22:40349466-40349164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
58-371
               

               
Cow position:
               
chr22:2404002-2403687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
58-371
               

               
Cow position:
               
chr22:25205848-25206155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
58-372
               

               
Cow position:
               
chr22:17852516-17852809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
59-372
               

               
Cow position:
               
chr22:15039063-15039371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
60-370
               

               
Cow position:
               
chr22:40072096-40071789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
167, 30
               

               
Conread position:
               
60-372
               

               
Cow position:
               
chr22:10122498-10122202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
161, 20
               

               
Conread position:
               
60-372
               

               
Cow position:
               
chr22:10295158-10294864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
60-372
               

               
Cow position:
               
chr22:14365842-14366140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
268, 16
               

               
Conread position:
               
60-372
               

               
Cow position:
               
chr22:21502863-21502553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 16
               

               
Conread position:
               
61-324
               

               
Cow position:
               
chr22:19047695-19047960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
61-351
               

               
Cow position:
               
chr22:27730160-27729885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 114
               

               
Conread position:
               
62-371
               

               
Cow position:
               
chr22:2524080-2523777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
62-372
               

               
Cow position:
               
chr22:25742832-25743138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 14
               

               
Conread position:
               
62-372
               

               
Cow position:
               
chr22:30484034-30483726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
62-372
               

               
Cow position:
               
chr22:38939824-38940135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
63-369
               

               
Cow position:
               
chr22:10315194-10314894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 83
               

               
Conread position:
               
63-372
               

               
Cow position:
               
chr22:26166508-26166801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
64-372
               

               
Cow position:
               
chr22:34712840-34712528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
166, 21
               

               
Conread position:
               
65-220
               

               
Cow position:
               
chr22:14141228-14141381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
65-302
               

               
Cow position:
               
chr22:38320570-38320798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 41
               

               
Conread position:
               
65-372
               

               
Cow position:
               
chr22:5616415-5616114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
238, 11
               

               
Conread position:
               
66-249
               

               
Cow position:
               
chr22:4137535-4137718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 147
               

               
Conread position:
               
66-304
               

               
Cow position:
               
chr22:12527007-12527247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
66-371
               

               
Cow position:
               
chr22:24734204-24734495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
66-372
               

               
Cow position:
               
chr22:10633029-10632729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
69-371
               

               
Cow position:
               
chr22:2148680-2148388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
263, 81
               

               
Conread position:
               
69-372
               

               
Cow position:
               
chr22:590451-590149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
70-303
               

               
Cow position:
               
chr22:12341307-12341074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
150, 71
               

               
Conread position:
               
71-360
               

               
Cow position:
               
chr22:4357199-4356915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
186, 14
               

               
Conread position:
               
71-366
               

               
Cow position:
               
chr22:13861686-13861407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
158, 47
               

               
Conread position:
               
71-372
               

               
Cow position:
               
chr22:26141384-26141086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 32
               

               
Conread position:
               
72-369
               

               
Cow position:
               
chr22:7852075-7851776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
72-372
               

               
Cow position:
               
chr22:10684982-10685274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
150, 53
               

               
Conread position:
               
72-372
               

               
Cow position:
               
chr22:21355032-21355331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 150
               

               
Conread position:
               
72-372
               

               
Cow position:
               
chr22:30269517-30269227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
76-360
               

               
Cow position:
               
chr22:30699283-30699000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
77-347
               

               
Cow position:
               
chr22:4645875-4645608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
144, 22
               

               
Conread position:
               
77-372
               

               
Cow position:
               
chr22:9977913-9977633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
78-303
               

               
Cow position:
               
chr22:4011288-4011063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
12, 136
               

               
Conread position:
               
83-324
               

               
Cow position:
               
chr22:34735962-34735726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
135, 122
               

               
Conread position:
               
85-324
               

               
Cow position:
               
chr22:40048650-40048414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
85-324
               

               
Cow position:
               
chr22:45846238-45846004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
85-353
               

               
Cow position:
               
chr22:14638381-14638651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
63, 146
               

               
Conread position:
               
85-360
               

               
Cow position:
               
chr22:9283502-9283776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 225
               

               
Conread position:
               
85-372
               

               
Cow position:
               
chr22:3269392-3269665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
241, 124
               

               
Conread position:
               
85-372
               

               
Cow position:
               
chr22:15090838-15090554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
141, 126
               

               
Conread position:
               
88-263
               

               
Cow position:
               
chr22:10929671-10929842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
88-372
               

               
Cow position:
               
chr22:864422-864704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
89-372
               

               
Cow position:
               
chr22:17152769-17152491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 128
               

               
Conread position:
               
92-247
               

               
Cow position:
               
chr22:12686597-12686744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
97-324
               

               
Cow position:
               
chr22:11766966-11767192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
99-357
               

               
Cow position:
               
chr22:3367268-3367017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
123, 104
               

               
Conread position:
               
99-368
               

               
Cow position:
               
chr22:22160808-22160538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 241
               

               
Conread position:
               
99-370
               

               
Cow position:
               
chr22:26184079-26184351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 77
               

               
Conread position:
               
99-372
               

               
Cow position:
               
chr22:1975691-1975426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
113, 34
               

               
Conread position:
               
99-372
               

               
Cow position:
               
chr22:3325670-3325395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 220
               

               
Conread position:
               
99-372
               

               
Cow position:
               
chr22:11458900-11458638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
204, 57
               

               
Conread position:
               
100-372
               

               
Cow position:
               
chr22:7967783-7967511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
107-310
               

               
Cow position:
               
chr22:15731268-15731072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
110-322
               

               
Cow position:
               
chr22:21393243-21393459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr22:19775361-19775573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
113, 135
               

               
Conread position:
               
110-360
               

               
Cow position:
               
chr22:4651247-4651002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr22:644697-644947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
195, 64
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr22:5675110-5675358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr22:26134153-26134421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 233
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr22:28357100-28356849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
216, 95
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr22:28371012-28370760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
111-324
               

               
Cow position:
               
chr22:7838660-7838452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
111-370
               

               
Cow position:
               
chr22:16650129-16650387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 90
               

               
Conread position:
               
111-371
               

               
Cow position:
               
chr22:7885061-7884806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 86
               

               
Conread position:
               
111-372
               

               
Cow position:
               
chr22:40720225-40720474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
214, 82
               

               
Conread position:
               
112-347
               

               
Cow position:
               
chr22:912167-911933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
93, 85
               

               
Conread position:
               
112-371
               

               
Cow position:
               
chr22:29290069-29290322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
114-371
               

               
Cow position:
               
chr22:17992964-17993215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 126
               

               
Conread position:
               
114-372
               

               
Cow position:
               
chr22:28057983-28058230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
75, 104
               

               
Conread position:
               
116-357
               

               
Cow position:
               
chr22:45796402-45796168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
117-325
               

               
Cow position:
               
chr22:1874757-1874550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
119-365
               

               
Cow position:
               
chr22:1279323-1279567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
119-369
               

               
Cow position:
               
chr22:31213641-31213390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr22:4990105-4990358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 116
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr22:5384717-5384469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
102, 210
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr22:10983412-10983158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 158
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr22:15068489-15068239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
120, 133
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr22:16273702-16273444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
98, 92
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr22:32326861-32326613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
209, 92
               

               
Conread position:
               
120-360
               

               
Cow position:
               
chr22:26097559-26097793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
120-372
               

               
Cow position:
               
chr22:3993671-3993424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
206, 86
               

               
Conread position:
               
120-372
               

               
Cow position:
               
chr22:27825901-27825650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 108
               

               
Conread position:
               
121-366
               

               
Cow position:
               
chr22:15753444-15753186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
155, 223
               

               
Conread position:
               
122-324
               

               
Cow position:
               
chr22:45019785-45019978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
198, 24
               

               
Conread position:
               
124-369
               

               
Cow position:
               
chr22:23689147-23689389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
176, 91
               

               
Conread position:
               
124-370
               

               
Cow position:
               
chr22:34895024-34894788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
124-372
               

               
Cow position:
               
chr22:36633282-36633045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr22:4043989-4043758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 134
               

               
Conread position:
               
125-372
               

               
Cow position:
               
chr22:34597986-34597744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
127-323
               

               
Cow position:
               
chr22:34632189-34631996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
127-372
               

               
Cow position:
               
chr22:10677937-10678171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
131-324
               

               
Cow position:
               
chr22:226404-226594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
132-366
               

               
Cow position:
               
chr22:13011219-13011457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
46, 155
               

               
Conread position:
               
135-357
               

               
Cow position:
               
chr22:32480434-32480654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 100
               

               
Conread position:
               
138-372
               

               
Cow position:
               
chr22:26151069-26151306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
180, 83
               

               
Conread position:
               
147-308
               

               
Cow position:
               
chr22:1987028-1986873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
147-360
               

               
Cow position:
               
chr22:43812387-43812598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
147-369
               

               
Cow position:
               
chr22:25629730-25629950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
65, 74
               

               
Conread position:
               
147-371
               

               
Cow position:
               
chr22:891108-891325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
147-372
               

               
Cow position:
               
chr22:27292125-27291911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
147-372
               

               
Cow position:
               
chr22:39696322-39696102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
178, 102
               

               
Conread position:
               
148-372
               

               
Cow position:
               
chr22:10585670-10585887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
75, 89
               

               
Conread position:
               
148-372
               

               
Cow position:
               
chr22:41270968-41271186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
207, 62
               

               
Conread position:
               
155-372
               

               
Cow position:
               
chr22:47582925-47582720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
173, 40
               

               
Conread position:
               
159-324
               

               
Cow position:
               
chr22:27267563-27267398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
159-372
               

               
Cow position:
               
chr22:23865492-23865275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
139, 176
               

               
Conread position:
               
164-372
               

               
Cow position:
               
chr22:8877282-8877086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
162, 45
               

               
Conread position:
               
165-371
               

               
Cow position:
               
chr22:19787661-19787865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 163
               

               
Conread position:
               
166-370
               

               
Cow position:
               
chr22:2702246-2702044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
138, 61
               

               
Conread position:
               
170-360
               

               
Cow position:
               
chr22:36569540-36569721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
170-372
               

               
Cow position:
               
chr22:6360475-6360674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 162
               

               
Conread position:
               
171-372
               

               
Cow position:
               
chr22:13951190-13950987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
178-370
               

               
Cow position:
               
chr22:9734858-9734671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
194-360
               

               
Cow position:
               
chr22:1342725-1342556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
8, 134
               

               
Conread position:
               
206-371
               

               
Cow position:
               
chr22:12974418-12974578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 20
               

               
Conread position:
               
206-372
               

               
Cow position:
               
chr22:37554645-37554812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
207-371
               

               
Cow position:
               
chr22:33949026-33949188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
119, 15
               

               
Conread position:
               
210-372
               

               
Cow position:
               
chr22:19848423-19848583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
211-372
               

               
Cow position:
               
chr22:8446910-8446749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
117, 127
               

               
Conread position:
               
217-372
               

               
Cow position:
               
chr22:7252677-7252834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
94, 122
               

               
Conread position:
               
220-370
               

               
Cow position:
               
chr22:45685063-45685217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
221-372
               

               
Cow position:
               
chr22:30689594-30689445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
234-371
               

               
Cow position:
               
chr22:11987266-11987402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 93
               

               
Conread position:
               
247-370
               

               
Cow position:
               
chr22:34930809-34930932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 90
               
Show alignments to all cow chromosomes.