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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_007044.5
        

               
Conread position:
               
7-372
               

               
Cow position:
               
chr23:13511901-13511551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
10-347
               

               
Cow position:
               
chr23:1428984-1428652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr23:1742531-1742183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr23:14739623-14739267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
160, 64
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chr23:28944893-28945194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
13-221
               

               
Cow position:
               
chr23:3244299-3244505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
13-370
               

               
Cow position:
               
chr23:4104569-4104226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 98
               

               
Conread position:
               
15-270
               

               
Cow position:
               
chr23:21439831-21440084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
206, 60
               

               
Conread position:
               
18-360
               

               
Cow position:
               
chr23:12334377-12334037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
18-372
               

               
Cow position:
               
chr23:344023-344359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
5, 48
               

               
Conread position:
               
20-372
               

               
Cow position:
               
chr23:41220051-41220405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
21-369
               

               
Cow position:
               
chr23:33717379-33717722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 54
               

               
Conread position:
               
22-323
               

               
Cow position:
               
chr23:21502468-21502773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 54
               

               
Conread position:
               
24-372
               

               
Cow position:
               
chr23:2487830-2488166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 51
               

               
Conread position:
               
27-218
               

               
Cow position:
               
chr23:5449865-5449675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
28-356
               

               
Cow position:
               
chr23:1767987-1767661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
30-323
               

               
Cow position:
               
chr23:30951113-30950824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 185
               

               
Conread position:
               
31-324
               

               
Cow position:
               
chr23:4336220-4335943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
31-370
               

               
Cow position:
               
chr23:33601384-33601703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
32-270
               

               
Cow position:
               
chr23:3814126-3814364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
183, 193
               

               
Conread position:
               
32-271
               

               
Cow position:
               
chr23:3431218-3430985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
188, 33
               

               
Conread position:
               
32-297
               

               
Cow position:
               
chr23:1222085-1222349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
185, 34
               

               
Conread position:
               
32-372
               

               
Cow position:
               
chr23:14164248-14164581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
33-371
               

               
Cow position:
               
chr23:30662486-30662808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
156, 42
               

               
Conread position:
               
33-372
               

               
Cow position:
               
chr23:10553857-10554193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
34-273
               

               
Cow position:
               
chr23:24926963-24926726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
174, 32
               

               
Conread position:
               
34-370
               

               
Cow position:
               
chr23:20744446-20744768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
34-372
               

               
Cow position:
               
chr23:11314883-11315198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
35-247
               

               
Cow position:
               
chr23:35368895-35369105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
35-324
               

               
Cow position:
               
chr23:3408755-3409041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
35-372
               

               
Cow position:
               
chr23:26986124-26986455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 29
               

               
Conread position:
               
36-372
               

               
Cow position:
               
chr23:38455029-38455367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
37-372
               

               
Cow position:
               
chr23:6172528-6172843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
37-372
               

               
Cow position:
               
chr23:36018300-36017961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr23:40648587-40648908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
42-360
               

               
Cow position:
               
chr23:3967417-3967724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
42-372
               

               
Cow position:
               
chr23:1290442-1290112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
43-371
               

               
Cow position:
               
chr23:9734551-9734234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
45-237
               

               
Cow position:
               
chr23:2160496-2160685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
45-372
               

               
Cow position:
               
chr23:31494007-31493697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 224
               

               
Conread position:
               
46-226
               

               
Cow position:
               
chr23:25990299-25990477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
174, 28
               

               
Conread position:
               
46-323
               

               
Cow position:
               
chr23:5436865-5437134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
46-346
               

               
Cow position:
               
chr23:18415917-18416207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
253, 29
               

               
Conread position:
               
46-370
               

               
Cow position:
               
chr23:40778402-40778083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
44, 29
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr23:29626564-29626233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
21, 299
               

               
Conread position:
               
47-372
               

               
Cow position:
               
chr23:1923700-1924017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
289, 30
               

               
Conread position:
               
48-345
               

               
Cow position:
               
chr23:4329531-4329839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 289
               

               
Conread position:
               
49-372
               

               
Cow position:
               
chr23:4646648-4646332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
166, 111
               

               
Conread position:
               
50-209
               

               
Cow position:
               
chr23:22238687-22238844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
50-272
               

               
Cow position:
               
chr23:14524123-14523899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
159, 147
               

               
Conread position:
               
50-273
               

               
Cow position:
               
chr23:385174-385398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
50-311
               

               
Cow position:
               
chr23:5795612-5795354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
169, 26
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr23:12363483-12363755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
50-368
               

               
Cow position:
               
chr23:187313-186997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr23:25864560-25864863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr23:534362-534048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 25
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr23:2282048-2282359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 26
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr23:8293640-8293320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr23:20557706-20558040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr23:26632939-26632618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
51-215
               

               
Cow position:
               
chr23:17231282-17231121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
51-259
               

               
Cow position:
               
chr23:40637390-40637184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
168, 25
               

               
Conread position:
               
51-292
               

               
Cow position:
               
chr23:24685379-24685147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr23:13599476-13599160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
52-274
               

               
Cow position:
               
chr23:17486691-17486913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
145, 24
               

               
Conread position:
               
52-359
               

               
Cow position:
               
chr23:3247721-3247415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
54-191
               

               
Cow position:
               
chr23:27849130-27848992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
54-199
               

               
Cow position:
               
chr23:1194359-1194504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
54-226
               

               
Cow position:
               
chr23:20093112-20093280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
54-249
               

               
Cow position:
               
chr23:1589720-1589524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
54-255
               

               
Cow position:
               
chr23:35965279-35965075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
54-262
               

               
Cow position:
               
chr23:5881387-5881593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
174, 22
               

               
Conread position:
               
54-262
               

               
Cow position:
               
chr23:33629060-33628851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
54-294
               

               
Cow position:
               
chr23:11212638-11212399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
164, 22
               

               
Conread position:
               
54-347
               

               
Cow position:
               
chr23:33622019-33622312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
54-352
               

               
Cow position:
               
chr23:5540281-5540001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
54-353
               

               
Cow position:
               
chr23:16744679-16744381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
203, 91
               

               
Conread position:
               
54-369
               

               
Cow position:
               
chr23:5707124-5706822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
278, 21
               

               
Conread position:
               
54-370
               

               
Cow position:
               
chr23:9268714-9268410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 94
               

               
Conread position:
               
54-370
               

               
Cow position:
               
chr23:16582779-16583088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr23:2501721-2502030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr23:6768039-6767709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 287
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr23:7845427-7845108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 174
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr23:8698551-8698262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
272, 19
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr23:18296938-18296626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
170, 21
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr23:21452597-21452914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
167, 149
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr23:21765052-21764736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 66
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr23:24704422-24704098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr23:34356771-34356452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr23:39778532-39778231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
169, 22
               

               
Conread position:
               
55-202
               

               
Cow position:
               
chr23:5785974-5785829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
55-273
               

               
Cow position:
               
chr23:3293824-3293606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
154, 21
               

               
Conread position:
               
55-345
               

               
Cow position:
               
chr23:15743219-15742934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
281, 22
               

               
Conread position:
               
55-372
               

               
Cow position:
               
chr23:5451447-5451140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
55-372
               

               
Cow position:
               
chr23:11045617-11045303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
56-254
               

               
Cow position:
               
chr23:1981532-1981721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
56-261
               

               
Cow position:
               
chr23:1863598-1863398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
56-319
               

               
Cow position:
               
chr23:3433784-3434042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
56-319
               

               
Cow position:
               
chr23:34611360-34611602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
56-346
               

               
Cow position:
               
chr23:9599624-9599337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
56-371
               

               
Cow position:
               
chr23:3281994-3282295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr23:1776511-1776812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr23:1883529-1883212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 204
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr23:2799708-2799385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr23:3394364-3394678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 147
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr23:6244466-6244768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
280, 101
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr23:6994854-6995155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
168, 42
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr23:29034443-29034132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
57-258
               

               
Cow position:
               
chr23:24966332-24966537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
57-371
               

               
Cow position:
               
chr23:39049311-39049609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
275, 23
               

               
Conread position:
               
58-372
               

               
Cow position:
               
chr23:29345641-29345941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
270, 17
               

               
Conread position:
               
59-255
               

               
Cow position:
               
chr23:22587007-22586821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
59-290
               

               
Cow position:
               
chr23:10497823-10497606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
60-255
               

               
Cow position:
               
chr23:16961422-16961228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
60-353
               

               
Cow position:
               
chr23:4959447-4959730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
60-372
               

               
Cow position:
               
chr23:2457569-2457281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
266, 86
               

               
Conread position:
               
60-372
               

               
Cow position:
               
chr23:16881036-16881339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
60-372
               

               
Cow position:
               
chr23:18901930-18902232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
266, 20
               

               
Conread position:
               
61-255
               

               
Cow position:
               
chr23:348824-349018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
61-372
               

               
Cow position:
               
chr23:24867435-24867121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 279
               

               
Conread position:
               
62-249
               

               
Cow position:
               
chr23:13202236-13202423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
158, 14
               

               
Conread position:
               
62-317
               

               
Cow position:
               
chr23:18286317-18286068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
153, 135
               

               
Conread position:
               
62-366
               

               
Cow position:
               
chr23:16699919-16700217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
243, 18
               

               
Conread position:
               
65-370
               

               
Cow position:
               
chr23:29458979-29459268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
66-300
               

               
Cow position:
               
chr23:1876832-1876598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
66-350
               

               
Cow position:
               
chr23:19774889-19774611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
259, 143
               

               
Conread position:
               
69-372
               

               
Cow position:
               
chr23:1906159-1905847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
188, 19
               

               
Conread position:
               
70-324
               

               
Cow position:
               
chr23:26051155-26050899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
70-370
               

               
Cow position:
               
chr23:40891479-40891182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
140, 247
               

               
Conread position:
               
70-372
               

               
Cow position:
               
chr23:11473388-11473688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
71-272
               

               
Cow position:
               
chr23:3830085-3830284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
148, 21
               

               
Conread position:
               
75-279
               

               
Cow position:
               
chr23:1403694-1403896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
77-311
               

               
Cow position:
               
chr23:1438402-1438173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
121, 133
               

               
Conread position:
               
78-320
               

               
Cow position:
               
chr23:5732659-5732417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
150, 75
               

               
Conread position:
               
79-270
               

               
Cow position:
               
chr23:19872575-19872757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
85-321
               

               
Cow position:
               
chr23:17404940-17404705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
85-359
               

               
Cow position:
               
chr23:1583627-1583359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
241, 61
               

               
Conread position:
               
85-372
               

               
Cow position:
               
chr23:5426535-5426246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 254
               

               
Conread position:
               
85-372
               

               
Cow position:
               
chr23:22399507-22399220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
90, 118
               

               
Conread position:
               
85-372
               

               
Cow position:
               
chr23:27544929-27544651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
89-255
               

               
Cow position:
               
chr23:4470402-4470569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
98-372
               

               
Cow position:
               
chr23:8923691-8923422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
98-372
               

               
Cow position:
               
chr23:40844739-40844468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
99-321
               

               
Cow position:
               
chr23:23409820-23409605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
200, 43
               

               
Conread position:
               
99-352
               

               
Cow position:
               
chr23:7361195-7360953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 107
               

               
Conread position:
               
99-369
               

               
Cow position:
               
chr23:3262410-3262678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
201, 56
               

               
Conread position:
               
99-372
               

               
Cow position:
               
chr23:19370987-19371252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
263, 113
               

               
Conread position:
               
99-372
               

               
Cow position:
               
chr23:30999652-30999394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
103-372
               

               
Cow position:
               
chr23:1885089-1885357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
201, 114
               

               
Conread position:
               
110-301
               

               
Cow position:
               
chr23:39275968-39275776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 100
               

               
Conread position:
               
110-326
               

               
Cow position:
               
chr23:35938422-35938203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
132, 169
               

               
Conread position:
               
110-347
               

               
Cow position:
               
chr23:1490117-1489891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
216, 96
               

               
Conread position:
               
110-347
               

               
Cow position:
               
chr23:36309497-36309261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
110-362
               

               
Cow position:
               
chr23:16563915-16563667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
110-371
               

               
Cow position:
               
chr23:39753191-39752934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 51
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr23:15287060-15287315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
111-372
               

               
Cow position:
               
chr23:37065925-37065656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 223
               

               
Conread position:
               
112-372
               

               
Cow position:
               
chr23:6367685-6367424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
108, 185
               

               
Conread position:
               
114-249
               

               
Cow position:
               
chr23:5400739-5400604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
114-366
               

               
Cow position:
               
chr23:24509766-24509523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
212, 37
               

               
Conread position:
               
115-345
               

               
Cow position:
               
chr23:1921155-1921385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
184, 97
               

               
Conread position:
               
115-372
               

               
Cow position:
               
chr23:4968452-4968705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
190, 104
               

               
Conread position:
               
116-372
               

               
Cow position:
               
chr23:1605299-1605042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
184, 158
               

               
Conread position:
               
116-372
               

               
Cow position:
               
chr23:39806940-39806691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
119-347
               

               
Cow position:
               
chr23:33711828-33711602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
213, 91
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr23:1337236-1337486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
187, 91
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr23:16631337-16631083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
183, 92
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr23:18802202-18802454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 211
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr23:20248627-20248881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
185, 208
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr23:24930004-24930254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
95, 113
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr23:29521540-29521288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr23:30585583-30585843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr23:31601383-31601639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
122-372
               

               
Cow position:
               
chr23:33570199-33569954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 90
               

               
Conread position:
               
129-372
               

               
Cow position:
               
chr23:4578981-4579215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 107
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr23:20056810-20057048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
132-372
               

               
Cow position:
               
chr23:9594781-9595011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr23:2055758-2055521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
193, 88
               

               
Conread position:
               
135-370
               

               
Cow position:
               
chr23:4980494-4980723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
151-372
               

               
Cow position:
               
chr23:4504866-4504646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
152-324
               

               
Cow position:
               
chr23:16664535-16664703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 120
               

               
Conread position:
               
160-372
               

               
Cow position:
               
chr23:4338584-4338788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
164-360
               

               
Cow position:
               
chr23:41285942-41285753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 108
               

               
Conread position:
               
167-370
               

               
Cow position:
               
chr23:14191574-14191370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
40, 160
               

               
Conread position:
               
168-372
               

               
Cow position:
               
chr23:15056623-15056823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 8
               

               
Conread position:
               
170-372
               

               
Cow position:
               
chr23:670636-670439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
174-370
               

               
Cow position:
               
chr23:38854722-38854914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 127
               

               
Conread position:
               
176-321
               

               
Cow position:
               
chr23:24809652-24809799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
185-323
               

               
Cow position:
               
chr23:9132444-9132579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
194-368
               

               
Cow position:
               
chr23:2259599-2259777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 147
               

               
Conread position:
               
206-370
               

               
Cow position:
               
chr23:30773695-30773858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 122
               

               
Conread position:
               
218-372
               

               
Cow position:
               
chr23:21343280-21343431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
226-372
               

               
Cow position:
               
chr23:1877912-1878052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
234-369
               

               
Cow position:
               
chr23:222022-221888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
97, 82
               

               
Conread position:
               
238-371
               

               
Cow position:
               
chr23:360966-361096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               
Show alignments to all cow chromosomes.