Cow genome map
| Conread name: | Ss1.1-rpigcf0_007044.5 |
| Conread position: | 1-221 |
| Cow position: | chr24:16118519-16118300 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 1-360 |
| Cow position: | chr24:27824625-27824264 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 6-260 |
| Cow position: | chr24:30308408-30308656 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 209, 57 |
| Conread position: | 10-324 |
| Cow position: | chr24:14648211-14648513 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 66 |
| Conread position: | 10-356 |
| Cow position: | chr24:14171548-14171889 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 205, 39 |
| Conread position: | 10-357 |
| Cow position: | chr24:18970350-18970701 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 13, 111 |
| Conread position: | 10-360 |
| Cow position: | chr24:8006453-8006111 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 56 |
| Conread position: | 10-371 |
| Cow position: | chr24:28253857-28253500 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 95 |
| Conread position: | 13-219 |
| Cow position: | chr24:42981616-42981818 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 16-372 |
| Cow position: | chr24:40850293-40849951 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 289, 52 |
| Conread position: | 18-324 |
| Cow position: | chr24:32071102-32070803 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 22-372 |
| Cow position: | chr24:34533246-34532916 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 24-225 |
| Cow position: | chr24:42639115-42639314 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 24-314 |
| Cow position: | chr24:2675445-2675169 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 24-324 |
| Cow position: | chr24:18331851-18331561 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 8 |
| Conread position: | 24-372 |
| Cow position: | chr24:33153911-33153575 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 26-280 |
| Cow position: | chr24:39791672-39791420 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 51 |
| Conread position: | 27-316 |
| Cow position: | chr24:43967370-43967656 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 93 |
| Conread position: | 30-324 |
| Cow position: | chr24:16895309-16895599 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 208, 45 |
| Conread position: | 31-360 |
| Cow position: | chr24:11119404-11119082 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 241, 45 |
| Conread position: | 33-322 |
| Cow position: | chr24:14457599-14457884 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 34-324 |
| Cow position: | chr24:31159739-31159454 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 212, 40 |
| Conread position: | 37-371 |
| Cow position: | chr24:32204672-32205000 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 187, 154 |
| Conread position: | 38-369 |
| Cow position: | chr24:24457132-24457451 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 261, 16 |
| Conread position: | 39-372 |
| Cow position: | chr24:34008454-34008788 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 184, 41 |
| Conread position: | 39-372 |
| Cow position: | chr24:43927214-43927529 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 40-372 |
| Cow position: | chr24:28326960-28327290 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 134 |
| Conread position: | 42-250 |
| Cow position: | chr24:27284933-27284731 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 42-352 |
| Cow position: | chr24:29181011-29180698 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 42-371 |
| Cow position: | chr24:29673640-29673313 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 42-372 |
| Cow position: | chr24:20225856-20225530 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 56, 77 |
| Conread position: | 42-372 |
| Cow position: | chr24:20943269-20942960 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 191, 39 |
| Conread position: | 43-194 |
| Cow position: | chr24:29539814-29539963 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 43-372 |
| Cow position: | chr24:201523-201842 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 116, 44 |
| Conread position: | 43-372 |
| Cow position: | chr24:37650782-37650463 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 33 |
| Conread position: | 44-370 |
| Cow position: | chr24:36404026-36404353 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 45-351 |
| Cow position: | chr24:25885046-25885350 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 172, 31 |
| Conread position: | 46-216 |
| Cow position: | chr24:17375751-17375582 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 46-252 |
| Cow position: | chr24:27349063-27349271 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 160, 99 |
| Conread position: | 46-267 |
| Cow position: | chr24:13948233-13948014 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 166, 39 |
| Conread position: | 46-367 |
| Cow position: | chr24:16089341-16089030 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 290, 42 |
| Conread position: | 46-372 |
| Cow position: | chr24:6102941-6102615 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 153, 91 |
| Conread position: | 46-372 |
| Cow position: | chr24:18484884-18485207 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 119, 29 |
| Conread position: | 46-372 |
| Cow position: | chr24:27906550-27906227 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 88, 39 |
| Conread position: | 46-372 |
| Cow position: | chr24:29782271-29781954 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 164, 8 |
| Conread position: | 47-369 |
| Cow position: | chr24:28063058-28062744 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 29 |
| Conread position: | 49-364 |
| Cow position: | chr24:6140838-6141163 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 50-324 |
| Cow position: | chr24:6912252-6912514 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 205 |
| Conread position: | 50-347 |
| Cow position: | chr24:27725902-27726199 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 170, 264 |
| Conread position: | 50-347 |
| Cow position: | chr24:28303259-28303535 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 50-357 |
| Cow position: | chr24:29063550-29063847 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 5, 26 |
| Conread position: | 50-366 |
| Cow position: | chr24:33944509-33944203 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 94, 35 |
| Conread position: | 50-370 |
| Cow position: | chr24:11887265-11886952 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 27 |
| Conread position: | 50-372 |
| Cow position: | chr24:3165929-3165614 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 179 |
| Conread position: | 50-372 |
| Cow position: | chr24:10671505-10671178 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 50-372 |
| Cow position: | chr24:17104460-17104773 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 56, 61 |
| Conread position: | 50-372 |
| Cow position: | chr24:17311115-17311416 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 168, 25 |
| Conread position: | 50-372 |
| Cow position: | chr24:32609756-32609431 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 66, 51 |
| Conread position: | 50-372 |
| Cow position: | chr24:33221824-33222147 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 51-265 |
| Cow position: | chr24:230392-230172 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 51-372 |
| Cow position: | chr24:29679204-29679518 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 53-366 |
| Cow position: | chr24:3493991-3493686 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 273, 169 |
| Conread position: | 54-203 |
| Cow position: | chr24:22133275-22133128 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 54-254 |
| Cow position: | chr24:20364306-20364503 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 54-255 |
| Cow position: | chr24:37823633-37823434 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 54-277 |
| Cow position: | chr24:37974877-37975097 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 160, 22 |
| Conread position: | 54-294 |
| Cow position: | chr24:29605926-29606176 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 54-346 |
| Cow position: | chr24:17860153-17860440 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 54-372 |
| Cow position: | chr24:10499319-10499003 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 54-372 |
| Cow position: | chr24:18474620-18474956 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 301 |
| Conread position: | 54-372 |
| Cow position: | chr24:19465814-19466141 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 132, 41 |
| Conread position: | 54-372 |
| Cow position: | chr24:20874789-20874469 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 54-372 |
| Cow position: | chr24:22079564-22079249 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 54-372 |
| Cow position: | chr24:27608002-27608305 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 166, 26 |
| Conread position: | 54-372 |
| Cow position: | chr24:30313922-30314243 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 31 |
| Conread position: | 54-372 |
| Cow position: | chr24:31359425-31359115 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 21 |
| Conread position: | 54-372 |
| Cow position: | chr24:31812292-31811977 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 167, 8 |
| Conread position: | 54-372 |
| Cow position: | chr24:33372655-33372343 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 235, 22 |
| Conread position: | 55-299 |
| Cow position: | chr24:28234146-28233911 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 168, 20 |
| Conread position: | 55-372 |
| Cow position: | chr24:2402267-2402583 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 20 |
| Conread position: | 55-372 |
| Cow position: | chr24:31816681-31816378 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 166, 21 |
| Conread position: | 56-288 |
| Cow position: | chr24:29561469-29561701 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 159, 150 |
| Conread position: | 56-293 |
| Cow position: | chr24:27713301-27713536 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 164, 209 |
| Conread position: | 56-345 |
| Cow position: | chr24:1269886-1269614 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 19 |
| Conread position: | 56-352 |
| Cow position: | chr24:24490916-24491201 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 270, 20 |
| Conread position: | 56-370 |
| Cow position: | chr24:39849785-39850084 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 56-371 |
| Cow position: | chr24:18024868-18025178 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 56-372 |
| Cow position: | chr24:16510081-16509765 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 124, 148 |
| Conread position: | 56-372 |
| Cow position: | chr24:30229583-30229261 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 57-255 |
| Cow position: | chr24:28043078-28042878 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 57-324 |
| Cow position: | chr24:18356951-18357216 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 18 |
| Conread position: | 57-357 |
| Cow position: | chr24:19769596-19769297 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 23, 214 |
| Conread position: | 57-370 |
| Cow position: | chr24:5754936-5754633 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 57-372 |
| Cow position: | chr24:5632930-5633244 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 57-372 |
| Cow position: | chr24:17955344-17955654 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 248, 23 |
| Conread position: | 57-372 |
| Cow position: | chr24:35675635-35675336 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 269, 19 |
| Conread position: | 58-360 |
| Cow position: | chr24:27748743-27748449 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 153 |
| Conread position: | 58-368 |
| Cow position: | chr24:42825405-42825701 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 58-372 |
| Cow position: | chr24:43028227-43028533 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 16, 102 |
| Conread position: | 59-370 |
| Cow position: | chr24:30235968-30235664 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 149, 14 |
| Conread position: | 59-372 |
| Cow position: | chr24:5142042-5141733 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 10 |
| Conread position: | 59-372 |
| Cow position: | chr24:28496482-28496794 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 60-368 |
| Cow position: | chr24:6131775-6132080 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 153, 9 |
| Conread position: | 60-372 |
| Cow position: | chr24:15057496-15057195 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 62-372 |
| Cow position: | chr24:15246545-15246842 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 152, 182 |
| Conread position: | 62-372 |
| Cow position: | chr24:23694803-23695104 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 46, 140 |
| Conread position: | 63-324 |
| Cow position: | chr24:23186821-23187080 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 16, 219 |
| Conread position: | 63-372 |
| Cow position: | chr24:43371341-43371041 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 65-288 |
| Cow position: | chr24:32095402-32095193 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 65-370 |
| Cow position: | chr24:10125965-10125656 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 69-352 |
| Cow position: | chr24:28319118-28319391 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 147, 173 |
| Conread position: | 69-371 |
| Cow position: | chr24:34396088-34396380 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 70-326 |
| Cow position: | chr24:37037992-37037734 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 61, 234 |
| Conread position: | 70-372 |
| Cow position: | chr24:24250812-24250525 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 76-368 |
| Cow position: | chr24:18374852-18374571 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 263, 120 |
| Conread position: | 76-372 |
| Cow position: | chr24:33723761-33724058 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 32, 89 |
| Conread position: | 76-372 |
| Cow position: | chr24:39227078-39226791 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 263, 70 |
| Conread position: | 77-372 |
| Cow position: | chr24:40301240-40300948 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 85-370 |
| Cow position: | chr24:18732027-18732331 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 120, 164 |
| Conread position: | 85-372 |
| Cow position: | chr24:2095807-2096096 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 157 |
| Conread position: | 85-372 |
| Cow position: | chr24:3430808-3430528 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 85-372 |
| Cow position: | chr24:39483551-39483266 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 71 |
| Conread position: | 98-372 |
| Cow position: | chr24:26928882-26929156 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 8 |
| Conread position: | 99-369 |
| Cow position: | chr24:15508483-15508740 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 202, 62 |
| Conread position: | 99-372 |
| Cow position: | chr24:28990622-28990358 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 127, 98 |
| Conread position: | 101-358 |
| Cow position: | chr24:30897477-30897735 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 237 |
| Conread position: | 107-372 |
| Cow position: | chr24:6150076-6149822 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 110-370 |
| Cow position: | chr24:32758712-32758969 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 104, 10 |
| Conread position: | 110-372 |
| Cow position: | chr24:352557-352812 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 215, 23 |
| Conread position: | 110-372 |
| Cow position: | chr24:31324335-31324072 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 106, 219 |
| Conread position: | 111-372 |
| Cow position: | chr24:212036-211774 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 101 |
| Conread position: | 115-317 |
| Cow position: | chr24:32054706-32054503 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 115-359 |
| Cow position: | chr24:31036393-31036154 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 118-372 |
| Cow position: | chr24:7001027-7001275 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 208, 28 |
| Conread position: | 119-369 |
| Cow position: | chr24:39143653-39143400 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 180, 209 |
| Conread position: | 119-372 |
| Cow position: | chr24:20249855-20250111 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 101, 92 |
| Conread position: | 119-372 |
| Cow position: | chr24:22225228-22224970 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 114 |
| Conread position: | 119-372 |
| Cow position: | chr24:39841808-39842060 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 119-372 |
| Cow position: | chr24:42344956-42345216 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 117 |
| Conread position: | 120-372 |
| Cow position: | chr24:7914046-7913791 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 91, 209 |
| Conread position: | 121-370 |
| Cow position: | chr24:40606765-40607012 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 121-372 |
| Cow position: | chr24:17159789-17159539 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 71 |
| Conread position: | 123-372 |
| Cow position: | chr24:20024650-20024400 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 182, 87 |
| Conread position: | 125-372 |
| Cow position: | chr24:40673386-40673644 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 44, 223 |
| Conread position: | 126-369 |
| Cow position: | chr24:6487950-6487715 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 91, 17 |
| Conread position: | 127-329 |
| Cow position: | chr24:17492331-17492146 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 198, 24 |
| Conread position: | 129-372 |
| Cow position: | chr24:11734754-11734515 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 87, 130 |
| Conread position: | 131-372 |
| Cow position: | chr24:39833486-39833723 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 81 |
| Conread position: | 144-372 |
| Cow position: | chr24:27052478-27052702 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 154, 90 |
| Conread position: | 151-360 |
| Cow position: | chr24:30178250-30178036 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 61, 180 |
| Conread position: | 168-319 |
| Cow position: | chr24:4615528-4615677 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 168-371 |
| Cow position: | chr24:17363656-17363855 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 169-364 |
| Cow position: | chr24:29028032-29027847 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 170-369 |
| Cow position: | chr24:43635428-43635230 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 67 |
| Conread position: | 170-372 |
| Cow position: | chr24:35794745-35794947 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 170-372 |
| Cow position: | chr24:39218850-39219054 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 173-370 |
| Cow position: | chr24:27941026-27941215 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 178-372 |
| Cow position: | chr24:11876870-11876676 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 161 |
| Conread position: | 184-360 |
| Cow position: | chr24:18695595-18695421 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 115, 27 |
| Conread position: | 185-372 |
| Cow position: | chr24:34761868-34761686 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 119, 32 |
| Conread position: | 217-372 |
| Cow position: | chr24:29539963-29540118 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 119, 109 |
Show alignments to all cow chromosomes.