Cow genome map

Conread name: Ss1.1-rpigcf0_007044.5

Conread position: 6-219
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 6-322
Cow position:
Alignm length: 318
Alignm identity: 206
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 111, 15

Conread position: 10-360
Cow position:
Alignm length: 361
Alignm identity: 244
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 7

Conread position: 12-252
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 56, 88

Conread position: 13-207
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 15-372
Cow position:
Alignm length: 364
Alignm identity: 248
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 77, 62

Conread position: 16-199
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 59

Conread position: 18-345
Cow position:
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 57

Conread position: 20-370
Cow position:
Alignm length: 353
Alignm identity: 201
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 22

Conread position: 24-323
Cow position:
Alignm length: 300
Alignm identity: 208
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 26-372
Cow position:
Alignm length: 351
Alignm identity: 237
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 193, 49

Conread position: 29-262
Cow position:
Alignm length: 236
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 67

Conread position: 30-235
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 129, 20

Conread position: 30-369
Cow position:
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 50

Conread position: 32-322
Cow position:
Alignm length: 295
Alignm identity: 192
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 179, 37

Conread position: 33-372
Cow position:
Alignm length: 346
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 310

Conread position: 34-208
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 34-361
Cow position:
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 40

Conread position: 34-367
Cow position:
Alignm length: 338
Alignm identity: 219
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 189, 23

Conread position: 37-218
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 37-372
Cow position:
Alignm length: 339
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 15

Conread position: 38-372
Cow position:
Alignm length: 337
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 57, 35

Conread position: 39-351
Cow position:
Alignm length: 317
Alignm identity: 207
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 72

Conread position: 39-360
Cow position:
Alignm length: 324
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 37

Conread position: 42-248
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 34

Conread position: 42-345
Cow position:
Alignm length: 313
Alignm identity: 224
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 183, 34

Conread position: 42-365
Cow position:
Alignm length: 334
Alignm identity: 227
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 61

Conread position: 43-372
Cow position:
Alignm length: 333
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 37

Conread position: 46-303
Cow position:
Alignm length: 258
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 46-372
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 84, 42

Conread position: 50-204
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 50-224
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 50-243
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 37

Conread position: 50-286
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 160, 223

Conread position: 50-324
Cow position:
Alignm length: 276
Alignm identity: 191
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 151, 227

Conread position: 50-328
Cow position:
Alignm length: 287
Alignm identity: 189
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 30

Conread position: 50-354
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 32, 119

Conread position: 50-365
Cow position:
Alignm length: 319
Alignm identity: 211
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 19

Conread position: 50-372
Cow position:
Alignm length: 323
Alignm identity: 216
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 50-372
Cow position:
Alignm length: 330
Alignm identity: 215
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 167, 50

Conread position: 50-372
Cow position:
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 26

Conread position: 50-372
Cow position:
Alignm length: 325
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 25

Conread position: 50-372
Cow position:
Alignm length: 325
Alignm identity: 208
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 173

Conread position: 51-309
Cow position:
Alignm length: 263
Alignm identity: 192
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 55, 25

Conread position: 51-360
Cow position:
Alignm length: 318
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 141, 18

Conread position: 52-369
Cow position:
Alignm length: 319
Alignm identity: 222
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 273, 169

Conread position: 53-323
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 168, 34

Conread position: 54-256
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 165, 22

Conread position: 54-299
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 54-308
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 54-344
Cow position:
Alignm length: 292
Alignm identity: 202
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 272, 22

Conread position: 54-360
Cow position:
Alignm length: 311
Alignm identity: 220
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 166, 26

Conread position: 54-360
Cow position:
Alignm length: 308
Alignm identity: 211
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 23

Conread position: 54-362
Cow position:
Alignm length: 310
Alignm identity: 208
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 36

Conread position: 54-365
Cow position:
Alignm length: 322
Alignm identity: 229
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 113, 21

Conread position: 54-366
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 14, 24

Conread position: 54-372
Cow position:
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 23

Conread position: 54-372
Cow position:
Alignm length: 320
Alignm identity: 214
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 89, 26

Conread position: 54-372
Cow position:
Alignm length: 323
Alignm identity: 217
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 52, 31

Conread position: 55-254
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 55-269
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 19

Conread position: 56-217
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 56-372
Cow position:
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 50

Conread position: 57-324
Cow position:
Alignm length: 273
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 125, 19

Conread position: 57-372
Cow position:
Alignm length: 317
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 269, 156

Conread position: 57-372
Cow position:
Alignm length: 318
Alignm identity: 208
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 18

Conread position: 57-372
Cow position:
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 19

Conread position: 57-372
Cow position:
Alignm length: 324
Alignm identity: 213
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 144

Conread position: 57-372
Cow position:
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 19

Conread position: 58-309
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 181, 16

Conread position: 58-359
Cow position:
Alignm length: 309
Alignm identity: 199
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 31

Conread position: 59-360
Cow position:
Alignm length: 303
Alignm identity: 210
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 267, 24

Conread position: 59-372
Cow position:
Alignm length: 315
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 266, 17

Conread position: 60-348
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 167, 16

Conread position: 61-324
Cow position:
Alignm length: 266
Alignm identity: 171
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 148, 0

Conread position: 63-372
Cow position:
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 12

Conread position: 66-351
Cow position:
Alignm length: 290
Alignm identity: 189
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 156, 79

Conread position: 67-370
Cow position:
Alignm length: 308
Alignm identity: 204
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 5, 119

Conread position: 71-248
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 135, 0

Conread position: 77-372
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 0

Conread position: 78-271
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 149, 119

Conread position: 85-372
Cow position:
Alignm length: 292
Alignm identity: 214
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 130, 174

Conread position: 85-372
Cow position:
Alignm length: 290
Alignm identity: 192
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 27, 19

Conread position: 99-372
Cow position:
Alignm length: 281
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 114

Conread position: 99-372
Cow position:
Alignm length: 291
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 192

Conread position: 102-372
Cow position:
Alignm length: 272
Alignm identity: 182
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 77, 55

Conread position: 110-318
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 36

Conread position: 110-323
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 110-362
Cow position:
Alignm length: 260
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 107

Conread position: 110-372
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 55

Conread position: 110-372
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 55, 12

Conread position: 111-370
Cow position:
Alignm length: 262
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 16

Conread position: 111-372
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 119, 99

Conread position: 112-372
Cow position:
Alignm length: 263
Alignm identity: 179
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 192, 100

Conread position: 119-319
Cow position:
Alignm length: 203
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 77

Conread position: 127-317
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 128-324
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 133-372
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 75

Conread position: 142-367
Cow position:
Alignm length: 228
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 58

Conread position: 147-369
Cow position:
Alignm length: 230
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 185

Conread position: 147-372
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 12, 26

Conread position: 155-356
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 188

Conread position: 161-356
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 161-372
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 113

Conread position: 164-371
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 16, 46

Conread position: 165-324
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 52

Conread position: 167-372
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 175

Conread position: 167-372
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 50

Conread position: 170-319
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 131

Conread position: 170-372
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 156, 47

Conread position: 171-370
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 36

Conread position: 184-371
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 69

Conread position: 221-362
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 135, 81

Show alignments to all cow chromosomes.