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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_007044.5
        

               
Conread position:
               
1-372
               

               
Cow position:
               
chr28:14934147-14933784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
6-365
               

               
Cow position:
               
chr28:2752311-2752671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
10-351
               

               
Cow position:
               
chr28:19025826-19026170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
144, 152
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr28:4841211-4841573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr28:10999494-10999846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr28:19079666-19080025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 77
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr28:31109822-31110183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
12-187
               

               
Cow position:
               
chr28:4051376-4051200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
5, 71
               

               
Conread position:
               
13-370
               

               
Cow position:
               
chr28:20313451-20313099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
13-372
               

               
Cow position:
               
chr28:12619753-12619385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
45, 99
               

               
Conread position:
               
14-186
               

               
Cow position:
               
chr28:18533734-18533903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
14-229
               

               
Cow position:
               
chr28:7497972-7498188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 99
               

               
Conread position:
               
17-372
               

               
Cow position:
               
chr28:15043690-15044036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
19-347
               

               
Cow position:
               
chr28:25806732-25806415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
21-360
               

               
Cow position:
               
chr28:6971180-6971510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 251
               

               
Conread position:
               
22-372
               

               
Cow position:
               
chr28:8021939-8022289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 43
               

               
Conread position:
               
24-353
               

               
Cow position:
               
chr28:26220418-26220098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 16
               

               
Conread position:
               
24-372
               

               
Cow position:
               
chr28:33052199-33051843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
26-287
               

               
Cow position:
               
chr28:13232948-13233205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 130
               

               
Conread position:
               
27-372
               

               
Cow position:
               
chr28:8408895-8408561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
30-372
               

               
Cow position:
               
chr28:2960672-2961009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 45
               

               
Conread position:
               
31-372
               

               
Cow position:
               
chr28:28164246-28163914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr28:4764036-4763734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
36-323
               

               
Cow position:
               
chr28:8140632-8140350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
36-372
               

               
Cow position:
               
chr28:12964720-12964399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
179, 102
               

               
Conread position:
               
40-274
               

               
Cow position:
               
chr28:10588874-10589107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
42-372
               

               
Cow position:
               
chr28:19222005-19222323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
290, 33
               

               
Conread position:
               
46-257
               

               
Cow position:
               
chr28:17739963-17739756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
169, 30
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr28:11828821-11829120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
280, 30
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr28:26743767-26743444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
164, 52
               

               
Conread position:
               
47-372
               

               
Cow position:
               
chr28:6059328-6059650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
49-372
               

               
Cow position:
               
chr28:11527119-11527433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
50-200
               

               
Cow position:
               
chr28:4364687-4364833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
50-255
               

               
Cow position:
               
chr28:4013221-4013022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
50-258
               

               
Cow position:
               
chr28:3445342-3445549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
50-273
               

               
Cow position:
               
chr28:7350791-7350575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
50-293
               

               
Cow position:
               
chr28:4182140-4181900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
234, 162
               

               
Conread position:
               
50-311
               

               
Cow position:
               
chr28:5204332-5204072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
174, 26
               

               
Conread position:
               
50-311
               

               
Cow position:
               
chr28:11079440-11079186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
50-345
               

               
Cow position:
               
chr28:24082408-24082116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
160, 27
               

               
Conread position:
               
50-346
               

               
Cow position:
               
chr28:11422677-11422966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
169, 95
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr28:4089921-4090219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
50-371
               

               
Cow position:
               
chr28:21868595-21868275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 25
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr28:2131787-2132100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 24
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr28:4138531-4138847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr28:4884115-4884444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr28:8787677-8787369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 27
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr28:9636320-9636634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 26
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr28:16210963-16211274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
167, 35
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr28:16369946-16370252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr28:20124920-20124608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr28:24966524-24966215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr28:31841209-31841517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
209, 49
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr28:9100074-9099758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 87
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr28:11866529-11866847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
279, 34
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr28:16919033-16919339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr28:28765767-28766087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr28:34430288-34430604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
52-371
               

               
Cow position:
               
chr28:20409521-20409216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
52-372
               

               
Cow position:
               
chr28:34133995-34133686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
163, 22
               

               
Conread position:
               
53-372
               

               
Cow position:
               
chr28:21355365-21355047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
150, 35
               

               
Conread position:
               
53-372
               

               
Cow position:
               
chr28:22371533-22371856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
54-221
               

               
Cow position:
               
chr28:5255007-5254843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
54-252
               

               
Cow position:
               
chr28:26531146-26531343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
148, 21
               

               
Conread position:
               
54-260
               

               
Cow position:
               
chr28:7619017-7619222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
165, 26
               

               
Conread position:
               
54-270
               

               
Cow position:
               
chr28:5138861-5139076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
161, 43
               

               
Conread position:
               
54-298
               

               
Cow position:
               
chr28:19564097-19564335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
156, 22
               

               
Conread position:
               
54-324
               

               
Cow position:
               
chr28:10863659-10863915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
166, 26
               

               
Conread position:
               
54-353
               

               
Cow position:
               
chr28:4071099-4070807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
54-356
               

               
Cow position:
               
chr28:16346398-16346692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
272, 31
               

               
Conread position:
               
54-358
               

               
Cow position:
               
chr28:25249487-25249187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
272, 22
               

               
Conread position:
               
54-359
               

               
Cow position:
               
chr28:29988978-29989281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
113, 22
               

               
Conread position:
               
54-360
               

               
Cow position:
               
chr28:3492651-3492954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
174, 22
               

               
Conread position:
               
54-363
               

               
Cow position:
               
chr28:14649478-14649175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
54-365
               

               
Cow position:
               
chr28:4016664-4016368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
54-370
               

               
Cow position:
               
chr28:21845090-21844780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 20
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr28:5436954-5437269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr28:5684838-5684532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr28:8347866-8347557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr28:11426410-11426723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 26
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr28:12430737-12430432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr28:14998201-14997884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
165, 34
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr28:26982605-26982924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
245, 26
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr28:27218455-27218143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr28:29199863-29199549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
55-209
               

               
Cow position:
               
chr28:29850681-29850835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
55-278
               

               
Cow position:
               
chr28:3741008-3740793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
55-366
               

               
Cow position:
               
chr28:33884533-33884236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
169, 21
               

               
Conread position:
               
55-372
               

               
Cow position:
               
chr28:6091497-6091182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
55-372
               

               
Cow position:
               
chr28:9285245-9285555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 21
               

               
Conread position:
               
55-372
               

               
Cow position:
               
chr28:11884387-11884700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 144
               

               
Conread position:
               
55-372
               

               
Cow position:
               
chr28:22321552-22321244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr28:3023781-3024089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
154, 43
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr28:30937540-30937844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
270, 20
               

               
Conread position:
               
57-327
               

               
Cow position:
               
chr28:22332662-22332399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
57-369
               

               
Cow position:
               
chr28:4159085-4158781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
268, 26
               

               
Conread position:
               
57-369
               

               
Cow position:
               
chr28:25057092-25056798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
57-370
               

               
Cow position:
               
chr28:7267816-7268115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
269, 23
               

               
Conread position:
               
57-371
               

               
Cow position:
               
chr28:4834711-4835022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr28:22346156-22345841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 200
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr28:23410189-23410501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
11, 157
               

               
Conread position:
               
58-243
               

               
Cow position:
               
chr28:777806-777619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
58-353
               

               
Cow position:
               
chr28:30326963-30327253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
133, 19
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr28:25596761-25596467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
58-372
               

               
Cow position:
               
chr28:3746333-3746024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
106, 153
               

               
Conread position:
               
58-372
               

               
Cow position:
               
chr28:4881111-4881422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
236, 22
               

               
Conread position:
               
59-372
               

               
Cow position:
               
chr28:18591401-18591092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
60-245
               

               
Cow position:
               
chr28:4438838-4438655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
61-372
               

               
Cow position:
               
chr28:11752011-11752322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 192
               

               
Conread position:
               
63-302
               

               
Cow position:
               
chr28:16245941-16246174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
159, 13
               

               
Conread position:
               
63-306
               

               
Cow position:
               
chr28:25129013-25128768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
65-372
               

               
Cow position:
               
chr28:3914839-3914532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
67-372
               

               
Cow position:
               
chr28:5128605-5128907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 192
               

               
Conread position:
               
69-327
               

               
Cow position:
               
chr28:12892317-12892569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
150, 98
               

               
Conread position:
               
69-343
               

               
Cow position:
               
chr28:23007610-23007886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
142, 270
               

               
Conread position:
               
69-370
               

               
Cow position:
               
chr28:13474420-13474130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 134
               

               
Conread position:
               
69-372
               

               
Cow position:
               
chr28:7865449-7865145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 272
               

               
Conread position:
               
71-372
               

               
Cow position:
               
chr28:11585084-11585385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 267
               

               
Conread position:
               
72-360
               

               
Cow position:
               
chr28:26719460-26719186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
286, 134
               

               
Conread position:
               
76-364
               

               
Cow position:
               
chr28:32365956-32365675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
76-369
               

               
Cow position:
               
chr28:7228277-7228561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr28:34561455-34561192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
139, 56
               

               
Conread position:
               
77-360
               

               
Cow position:
               
chr28:3169077-3169361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
132, 100
               

               
Conread position:
               
83-372
               

               
Cow position:
               
chr28:2862974-2862684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 155
               

               
Conread position:
               
85-242
               

               
Cow position:
               
chr28:2762299-2762142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
85-317
               

               
Cow position:
               
chr28:22813362-22813139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
138, 73
               

               
Conread position:
               
85-370
               

               
Cow position:
               
chr28:16204230-16204508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
241, 116
               

               
Conread position:
               
85-372
               

               
Cow position:
               
chr28:29416613-29416894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
89-324
               

               
Cow position:
               
chr28:18186656-18186421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
127, 99
               

               
Conread position:
               
89-372
               

               
Cow position:
               
chr28:4809879-4809616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
183, 116
               

               
Conread position:
               
92-349
               

               
Cow position:
               
chr28:2873016-2872760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
117, 161
               

               
Conread position:
               
99-372
               

               
Cow position:
               
chr28:21598162-21598431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
124, 134
               

               
Conread position:
               
99-372
               

               
Cow position:
               
chr28:23676228-23675966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
99-372
               

               
Cow position:
               
chr28:26922278-26922542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
131, 110
               

               
Conread position:
               
101-370
               

               
Cow position:
               
chr28:13267877-13267606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
106-372
               

               
Cow position:
               
chr28:11686945-11687210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr28:4536538-4536323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr28:14512612-14512389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 200
               

               
Conread position:
               
110-368
               

               
Cow position:
               
chr28:10745293-10745036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 100
               

               
Conread position:
               
110-369
               

               
Cow position:
               
chr28:16085404-16085145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
196, 143
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr28:18625313-18625045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 233
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr28:21380960-21380697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
105, 229
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr28:21672872-21672621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr28:33163385-33163645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
111-324
               

               
Cow position:
               
chr28:30746652-30746861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
114-372
               

               
Cow position:
               
chr28:5074433-5074682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
114-372
               

               
Cow position:
               
chr28:21502467-21502217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
192, 97
               

               
Conread position:
               
119-364
               

               
Cow position:
               
chr28:9426280-9426520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
187, 165
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr28:7512514-7512769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
120-372
               

               
Cow position:
               
chr28:7548989-7549240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 187
               

               
Conread position:
               
123-370
               

               
Cow position:
               
chr28:4588163-4587920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
205, 21
               

               
Conread position:
               
127-372
               

               
Cow position:
               
chr28:7751239-7751478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
127-372
               

               
Cow position:
               
chr28:10533873-10534108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr28:2737747-2737989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
142, 148
               

               
Conread position:
               
130-372
               

               
Cow position:
               
chr28:3256857-3256616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
202, 82
               

               
Conread position:
               
141-360
               

               
Cow position:
               
chr28:5904780-5904566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
158-372
               

               
Cow position:
               
chr28:24646571-24646363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
166-372
               

               
Cow position:
               
chr28:118027-118233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
133, 153
               

               
Conread position:
               
168-344
               

               
Cow position:
               
chr28:7607955-7608133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
53, 160
               

               
Conread position:
               
170-327
               

               
Cow position:
               
chr28:10762680-10762523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
171-371
               

               
Cow position:
               
chr28:7980399-7980595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
171-372
               

               
Cow position:
               
chr28:3751332-3751141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
171-372
               

               
Cow position:
               
chr28:15063321-15063516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
155, 102
               

               
Conread position:
               
174-372
               

               
Cow position:
               
chr28:657436-657625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
178-372
               

               
Cow position:
               
chr28:26784452-26784644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
121, 150
               

               
Conread position:
               
182-372
               

               
Cow position:
               
chr28:13290122-13290312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
185-356
               

               
Cow position:
               
chr28:7590177-7590347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
113, 32
               

               
Conread position:
               
186-372
               

               
Cow position:
               
chr28:2905578-2905403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
198-372
               

               
Cow position:
               
chr28:23776039-23775868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
205-372
               

               
Cow position:
               
chr28:8935921-8935756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
206-360
               

               
Cow position:
               
chr28:5658537-5658383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
206-372
               

               
Cow position:
               
chr28:8348669-8348830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
221-371
               

               
Cow position:
               
chr28:5188435-5188578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
238-372
               

               
Cow position:
               
chr28:23724502-23724633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 109
               
Show alignments to all cow chromosomes.