Cow genome map

Conread name: Ss1.1-rpigcf0_007044.5

Conread position: 1-191
Cow position: chr6:54349915-54349727 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 21

Conread position: 1-372
Cow position: chr6:9452544-9452916 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 260

Conread position: 3-231
Cow position: chr6:1002046-1002269 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 6-311
Cow position: chr6:51969285-51968981 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 229, 36

Conread position: 7-370
Cow position: chr6:38610177-38609823 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 235
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 99, 31

Conread position: 8-268
Cow position: chr6:55535538-55535792 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 224, 66

Conread position: 9-364
Cow position: chr6:58074263-58073909 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 233
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 14

Conread position: 9-371
Cow position: chr6:6343648-6343284 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 71, 207

Conread position: 10-255
Cow position: chr6:35964323-35964564 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 141, 70

Conread position: 10-345
Cow position: chr6:47799509-47799171 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 236

Conread position: 10-348
Cow position: chr6:66531608-66531941 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 132, 0

Conread position: 10-372
Cow position: chr6:54990786-54991145 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 220

Conread position: 11-191
Cow position: chr6:21066672-21066851 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 156, 65

Conread position: 12-268
Cow position: chr6:222253-222493 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 12-370
Cow position: chr6:14958125-14958490 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 249
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 48, 230

Conread position: 13-372
Cow position: chr6:8209395-8209732 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 54, 65

Conread position: 15-327
Cow position: chr6:16764439-16764754 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 211
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 91, 59

Conread position: 15-371
Cow position: chr6:60057452-60057798 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 290, 70

Conread position: 15-372
Cow position: chr6:59069413-59069771 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 104, 58

Conread position: 16-246
Cow position: chr6:53090217-53089986 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 40, 32

Conread position: 17-372
Cow position: chr6:37199333-37199682 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 233
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 205, 63

Conread position: 21-372
Cow position: chr6:416314-415951 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 82

Conread position: 21-372
Cow position: chr6:20097756-20098107 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 310

Conread position: 22-155
Cow position: chr6:47676213-47676082 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 23-370
Cow position: chr6:21869448-21869786 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 67, 62

Conread position: 24-304
Cow position: chr6:23465836-23466108 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 25-372
Cow position: chr6:35993782-35993434 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 208, 74

Conread position: 28-367
Cow position: chr6:67456912-67456571 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 224
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 209, 57

Conread position: 32-181
Cow position: chr6:28900516-28900369 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 32-346
Cow position: chr6:7130688-7130998 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 132, 248

Conread position: 34-347
Cow position: chr6:66131492-66131181 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 208, 55

Conread position: 34-366
Cow position: chr6:26728347-26728667 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 238, 22

Conread position: 34-372
Cow position: chr6:7989231-7989559 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 36

Conread position: 35-293
Cow position: chr6:9302533-9302784 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 237, 48

Conread position: 36-372
Cow position: chr6:4691792-4692127 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 219
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 179, 13

Conread position: 36-372
Cow position: chr6:46282819-46283141 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 24

Conread position: 37-372
Cow position: chr6:67214936-67214598 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 33

Conread position: 38-255
Cow position: chr6:60265995-60266212 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 158

Conread position: 38-259
Cow position: chr6:49437517-49437298 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 39-254
Cow position: chr6:19259156-19259374 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 39-372
Cow position: chr6:5095359-5095693 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 213
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 139, 46

Conread position: 39-372
Cow position: chr6:21456501-21456833 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 65

Conread position: 41-370
Cow position: chr6:38207313-38207636 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 42-307
Cow position: chr6:12091813-12092075 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 12

Conread position: 42-347
Cow position: chr6:10225477-10225761 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 283, 35

Conread position: 42-365
Cow position: chr6:15243435-15243116 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 34

Conread position: 42-372
Cow position: chr6:38641675-38641355 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 108

Conread position: 42-372
Cow position: chr6:67951129-67950816 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 180, 34

Conread position: 43-356
Cow position: chr6:38441352-38441051 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 12, 56

Conread position: 43-370
Cow position: chr6:47520234-47519905 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 174, 285

Conread position: 43-372
Cow position: chr6:64432116-64431796 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 212
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 108, 9

Conread position: 46-324
Cow position: chr6:14914060-14914344 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 47

Conread position: 46-333
Cow position: chr6:17794588-17794864 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 253, 29

Conread position: 46-353
Cow position: chr6:62670043-62669746 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 163, 0

Conread position: 46-357
Cow position: chr6:53841330-53841631 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 46-368
Cow position: chr6:16423882-16423560 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 36

Conread position: 46-370
Cow position: chr6:54365156-54365469 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 168, 34

Conread position: 46-372
Cow position: chr6:5609271-5609583 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 0

Conread position: 46-372
Cow position: chr6:15243012-15242689 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 129, 34

Conread position: 46-372
Cow position: chr6:17313911-17313587 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 213
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 165, 72

Conread position: 46-372
Cow position: chr6:61631432-61631756 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 212
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 33

Conread position: 47-299
Cow position: chr6:17068472-17068723 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 47-327
Cow position: chr6:61269487-61269207 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 164, 38

Conread position: 47-372
Cow position: chr6:20157508-20157182 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 213
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 43, 27

Conread position: 47-372
Cow position: chr6:23696175-23695854 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 162, 29

Conread position: 48-324
Cow position: chr6:61524031-61524300 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 161, 28

Conread position: 49-294
Cow position: chr6:50504631-50504388 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 167, 211

Conread position: 49-366
Cow position: chr6:54867692-54867375 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 170, 280

Conread position: 50-221
Cow position: chr6:58725540-58725373 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 50-266
Cow position: chr6:60516997-60516786 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 50-277
Cow position: chr6:60144026-60144251 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 152, 30

Conread position: 50-293
Cow position: chr6:18117878-18118120 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 169, 37

Conread position: 50-294
Cow position: chr6:67643516-67643760 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 13, 66

Conread position: 50-300
Cow position: chr6:693972-694222 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 25

Conread position: 50-314
Cow position: chr6:25614917-25615193 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 80, 0

Conread position: 50-358
Cow position: chr6:54132986-54132684 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 18, 28

Conread position: 50-360
Cow position: chr6:36202994-36202692 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 19, 95

Conread position: 50-370
Cow position: chr6:48010353-48010666 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 204
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 70, 56

Conread position: 50-371
Cow position: chr6:323129-323451 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 210
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 42

Conread position: 50-371
Cow position: chr6:67617773-67618101 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 207
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 41

Conread position: 50-372
Cow position: chr6:2547428-2547097 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 25

Conread position: 50-372
Cow position: chr6:6965221-6965528 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 222
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 79

Conread position: 50-372
Cow position: chr6:7128233-7128543 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 165, 9

Conread position: 50-372
Cow position: chr6:48112369-48112061 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 50-372
Cow position: chr6:50984398-50984081 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 42

Conread position: 50-372
Cow position: chr6:51581082-51581400 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 49

Conread position: 50-372
Cow position: chr6:52478238-52478570 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 27

Conread position: 50-372
Cow position: chr6:65871208-65870881 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 30

Conread position: 51-202
Cow position: chr6:12761449-12761301 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 51-270
Cow position: chr6:3351201-3350974 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 159, 0

Conread position: 51-345
Cow position: chr6:35842828-35842530 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 202
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 41

Conread position: 51-355
Cow position: chr6:61168928-61168645 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 291, 148

Conread position: 51-372
Cow position: chr6:49421618-49421922 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 96

Conread position: 51-372
Cow position: chr6:52413030-52412711 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 22

Conread position: 52-372
Cow position: chr6:63093741-63094072 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 39

Conread position: 53-371
Cow position: chr6:528114-528419 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 22

Conread position: 54-212
Cow position: chr6:30024053-30023897 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 54-242
Cow position: chr6:4702649-4702842 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 110

Conread position: 54-246
Cow position: chr6:21293327-21293518 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 114, 68

Conread position: 54-249
Cow position: chr6:63065994-63065800 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 19

Conread position: 54-264
Cow position: chr6:36920808-36921013 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 166, 15

Conread position: 54-273
Cow position: chr6:68816336-68816118 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 168, 93

Conread position: 54-279
Cow position: chr6:60468409-60468183 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 14, 58

Conread position: 54-314
Cow position: chr6:37332279-37332018 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 23

Conread position: 54-324
Cow position: chr6:58370918-58370654 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 153, 23

Conread position: 54-358
Cow position: chr6:32287804-32287511 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 23

Conread position: 54-360
Cow position: chr6:15305738-15305446 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 272, 92

Conread position: 54-366
Cow position: chr6:55282122-55282427 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 161

Conread position: 54-370
Cow position: chr6:1499816-1499497 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 17, 58

Conread position: 54-370
Cow position: chr6:24468228-24468538 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 22

Conread position: 54-370
Cow position: chr6:67187852-67187544 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 203
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 39

Conread position: 54-371
Cow position: chr6:29485252-29484948 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 21

Conread position: 54-372
Cow position: chr6:120413-120096 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 52, 22

Conread position: 54-372
Cow position: chr6:10105811-10106139 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 21

Conread position: 54-372
Cow position: chr6:28483188-28482872 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 209
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 54

Conread position: 54-372
Cow position: chr6:31535400-31535714 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 29

Conread position: 54-372
Cow position: chr6:36196378-36196071 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 22

Conread position: 54-372
Cow position: chr6:37149357-37149050 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 169, 26

Conread position: 54-372
Cow position: chr6:38853489-38853801 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 52, 57

Conread position: 54-372
Cow position: chr6:39358170-39358484 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 24, 210

Conread position: 54-372
Cow position: chr6:40032358-40032046 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 39

Conread position: 54-372
Cow position: chr6:44194382-44194688 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 22

Conread position: 54-372
Cow position: chr6:46465989-46465685 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 21

Conread position: 54-372
Cow position: chr6:53024638-53024937 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 165, 11

Conread position: 54-372
Cow position: chr6:53460399-53460715 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 163, 22

Conread position: 54-372
Cow position: chr6:57546059-57546359 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 283, 92

Conread position: 55-249
Cow position: chr6:51463465-51463657 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 153, 57

Conread position: 55-309
Cow position: chr6:13565253-13565000 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 38

Conread position: 55-362
Cow position: chr6:38640400-38640094 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 21

Conread position: 55-367
Cow position: chr6:60740185-60739877 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 17, 150

Conread position: 55-371
Cow position: chr6:19264332-19264642 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 20

Conread position: 55-372
Cow position: chr6:6401117-6400805 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 18

Conread position: 56-244
Cow position: chr6:53546202-53546016 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 56-365
Cow position: chr6:60118313-60118010 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 202
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 216, 24

Conread position: 56-372
Cow position: chr6:8637448-8637132 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 21

Conread position: 56-372
Cow position: chr6:15937685-15937996 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 12

Conread position: 56-372
Cow position: chr6:45690444-45690736 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 50, 19

Conread position: 57-191
Cow position: chr6:23938227-23938093 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 57-270
Cow position: chr6:1422651-1422440 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 162, 18

Conread position: 57-311
Cow position: chr6:60273844-60274094 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 69, 17

Conread position: 57-367
Cow position: chr6:50577686-50577382 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 137, 18

Conread position: 57-372
Cow position: chr6:10176137-10176446 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 35

Conread position: 57-372
Cow position: chr6:46860001-46860311 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 35

Conread position: 58-223
Cow position: chr6:21470265-21470427 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 58-260
Cow position: chr6:34119190-34119390 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 173, 40

Conread position: 58-300
Cow position: chr6:22985689-22985933 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 38

Conread position: 58-324
Cow position: chr6:59603044-59603306 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 166, 11

Conread position: 58-341
Cow position: chr6:38771444-38771172 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 58-362
Cow position: chr6:63720365-63720062 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 162, 19

Conread position: 58-372
Cow position: chr6:8966261-8965946 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 18

Conread position: 58-372
Cow position: chr6:53932684-53932991 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 34

Conread position: 59-249
Cow position: chr6:62056779-62056588 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 156, 0

Conread position: 59-249
Cow position: chr6:67451208-67451397 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 163, 15

Conread position: 59-372
Cow position: chr6:26915492-26915187 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 59-372
Cow position: chr6:53652203-53651898 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 21

Conread position: 60-321
Cow position: chr6:7119457-7119706 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 60-368
Cow position: chr6:49398456-49398755 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 266, 131

Conread position: 60-372
Cow position: chr6:47575072-47574762 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 154

Conread position: 62-372
Cow position: chr6:57571639-57571330 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 14

Conread position: 62-372
Cow position: chr6:58590435-58590131 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 142, 176

Conread position: 63-347
Cow position: chr6:50976209-50975936 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 149, 0

Conread position: 63-372
Cow position: chr6:19681363-19681670 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 206
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 190

Conread position: 64-370
Cow position: chr6:24004696-24004406 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 146, 0

Conread position: 66-324
Cow position: chr6:1429797-1429540 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 171
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 157, 33

Conread position: 66-372
Cow position: chr6:42565845-42565542 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 158, 33

Conread position: 67-372
Cow position: chr6:12551427-12551123 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 91

Conread position: 69-262
Cow position: chr6:66570595-66570400 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 150, 143

Conread position: 69-372
Cow position: chr6:13687659-13687954 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 31

Conread position: 69-372
Cow position: chr6:17414290-17414594 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 209

Conread position: 69-372
Cow position: chr6:28976885-28977172 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 140, 204

Conread position: 70-360
Cow position: chr6:1886513-1886799 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 235, 90

Conread position: 70-372
Cow position: chr6:38218819-38218529 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 71-249
Cow position: chr6:68685706-68685530 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 71-341
Cow position: chr6:58597352-58597620 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 180

Conread position: 75-372
Cow position: chr6:8787888-8788180 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 164, 151

Conread position: 77-273
Cow position: chr6:31078722-31078920 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 22

Conread position: 77-361
Cow position: chr6:28999793-29000058 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 70, 15

Conread position: 77-372
Cow position: chr6:60350145-60350442 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 256

Conread position: 82-372
Cow position: chr6:21231666-21231393 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 128, 0

Conread position: 84-372
Cow position: chr6:38614952-38614681 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 62

Conread position: 85-255
Cow position: chr6:32853326-32853156 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 66

Conread position: 85-299
Cow position: chr6:20929375-20929590 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 138, 25

Conread position: 85-321
Cow position: chr6:66375194-66375426 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 120, 0

Conread position: 85-324
Cow position: chr6:4864408-4864647 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 85-369
Cow position: chr6:24031515-24031235 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 124, 61

Conread position: 85-369
Cow position: chr6:37634935-37634649 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 79, 246

Conread position: 85-372
Cow position: chr6:31526185-31525905 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 212

Conread position: 85-372
Cow position: chr6:35613278-35613557 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 195

Conread position: 85-372
Cow position: chr6:47640293-47640580 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 127

Conread position: 89-260
Cow position: chr6:54082854-54083026 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 94, 100

Conread position: 95-370
Cow position: chr6:130035-130306 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 9

Conread position: 95-372
Cow position: chr6:32122036-32121768 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 157

Conread position: 96-372
Cow position: chr6:10695988-10695724 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 232, 29

Conread position: 97-364
Cow position: chr6:46865465-46865732 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 177
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 14

Conread position: 98-364
Cow position: chr6:54936705-54936438 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 178
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 8

Conread position: 98-372
Cow position: chr6:26450438-26450174 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 143, 53

Conread position: 99-345
Cow position: chr6:4383604-4383366 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 173, 84

Conread position: 99-370
Cow position: chr6:34196024-34196289 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 15, 120

Conread position: 99-370
Cow position: chr6:36652547-36652273 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 240

Conread position: 99-372
Cow position: chr6:23247841-23248106 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 121, 62

Conread position: 99-372
Cow position: chr6:36470437-36470706 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 232

Conread position: 100-372
Cow position: chr6:899169-899433 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 110-254
Cow position: chr6:12197294-12197148 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 110-262
Cow position: chr6:32516995-32517137 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 110-279
Cow position: chr6:59770338-59770173 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 110, 21

Conread position: 110-347
Cow position: chr6:66874465-66874229 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 112, 70

Conread position: 110-369
Cow position: chr6:15022433-15022701 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 162, 218

Conread position: 110-372
Cow position: chr6:25407277-25407535 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 101

Conread position: 110-372
Cow position: chr6:52248016-52248278 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 24, 119

Conread position: 110-372
Cow position: chr6:61608626-61608364 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 216

Conread position: 111-372
Cow position: chr6:12542817-12543076 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 106, 217

Conread position: 112-372
Cow position: chr6:67968498-67968757 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 112, 172

Conread position: 114-353
Cow position: chr6:17245503-17245738 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 64

Conread position: 114-371
Cow position: chr6:54368794-54369042 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 181, 95

Conread position: 114-372
Cow position: chr6:40713393-40713645 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 192, 104

Conread position: 119-353
Cow position: chr6:60667518-60667293 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 185, 87

Conread position: 119-369
Cow position: chr6:8562825-8562576 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 110, 22

Conread position: 119-370
Cow position: chr6:16746448-16746195 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 166
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 180, 92

Conread position: 119-370
Cow position: chr6:32421252-32420994 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 89

Conread position: 119-372
Cow position: chr6:445428-445168 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 171
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 104, 226

Conread position: 119-372
Cow position: chr6:1770093-1770342 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 167
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 186, 92

Conread position: 119-372
Cow position: chr6:16316421-16316163 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 216

Conread position: 119-372
Cow position: chr6:50747102-50746837 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 20

Conread position: 119-372
Cow position: chr6:61113872-61113607 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 67

Conread position: 119-372
Cow position: chr6:63272506-63272757 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 100, 93

Conread position: 120-323
Cow position: chr6:54208031-54208237 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 65

Conread position: 120-356
Cow position: chr6:35415411-35415653 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 120-367
Cow position: chr6:47616505-47616751 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 161, 100

Conread position: 120-370
Cow position: chr6:17090703-17090454 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 48

Conread position: 120-372
Cow position: chr6:27888455-27888205 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 100, 89

Conread position: 121-372
Cow position: chr6:47305444-47305196 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 139

Conread position: 121-372
Cow position: chr6:55040111-55040359 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 91

Conread position: 122-292
Cow position: chr6:7170246-7170414 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 93

Conread position: 126-298
Cow position: chr6:36493443-36493622 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 15

Conread position: 127-372
Cow position: chr6:62924899-62925136 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 87

Conread position: 130-291
Cow position: chr6:1944807-1944645 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 37

Conread position: 131-369
Cow position: chr6:9323237-9323018 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 195, 26

Conread position: 131-372
Cow position: chr6:24962238-24962002 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 39, 141

Conread position: 132-290
Cow position: chr6:67615338-67615496 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 132-324
Cow position: chr6:11192372-11192565 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 156
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 87, 166

Conread position: 133-357
Cow position: chr6:12829134-12829354 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 107

Conread position: 137-365
Cow position: chr6:18961430-18961662 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 189, 9

Conread position: 144-367
Cow position: chr6:48803553-48803779 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 147-372
Cow position: chr6:21542400-21542177 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 63, 181

Conread position: 148-359
Cow position: chr6:37376438-37376651 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 77, 185

Conread position: 152-360
Cow position: chr6:49410625-49410825 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 64, 90

Conread position: 160-306
Cow position: chr6:63168931-63169083 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 162-372
Cow position: chr6:6460604-6460396 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 177, 53

Conread position: 168-357
Cow position: chr6:34031717-34031531 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 158, 59

Conread position: 169-372
Cow position: chr6:58173240-58173040 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 126

Conread position: 170-372
Cow position: chr6:44984384-44984183 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 134, 41

Conread position: 170-372
Cow position: chr6:53731578-53731378 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 158

Conread position: 170-372
Cow position: chr6:61137429-61137228 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 132, 0

Conread position: 172-351
Cow position: chr6:38234011-38233834 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 154, 0

Conread position: 185-370
Cow position: chr6:36928700-36928512 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 146

Conread position: 202-372
Cow position: chr6:33277068-33276894 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 133

Conread position: 206-370
Cow position: chr6:47624943-47625108 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 28

Conread position: 210-364
Cow position: chr6:48344347-48344193 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 127

Conread position: 214-372
Cow position: chr6:39994450-39994604 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 112, 68

Conread position: 218-371
Cow position: chr6:15922992-15923141 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 222-360
Cow position: chr6:32210625-32210763 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 115

Conread position: 238-372
Cow position: chr6:2013006-2012876 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 240-372
Cow position: chr6:18904356-18904485 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 86, 0

Show alignments to all cow chromosomes.