Cow genome map

Conread name: Ss1.1-rpigcf0_007044.5

Conread position: 1-372
Cow position: chrX:7719072-7718698 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 253
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 222

Conread position: 1-372
Cow position: chrX:17726186-17725818 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 326

Conread position: 3-293
Cow position: chrX:11454829-11455128 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 190
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 6-208
Cow position: chrX:29501681-29501878 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 33, 7

Conread position: 6-372
Cow position: chrX:13382529-13382169 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 11, 76

Conread position: 6-372
Cow position: chrX:27771767-27772117 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 48

Conread position: 7-304
Cow position: chrX:37129471-37129177 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 86

Conread position: 9-372
Cow position: chrX:39558149-39558503 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 37

Conread position: 10-216
Cow position: chrX:18046597-18046396 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 66

Conread position: 10-358
Cow position: chrX:11717582-11717930 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 72

Conread position: 10-364
Cow position: chrX:18425738-18426090 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 222
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 40

Conread position: 10-365
Cow position: chrX:42235326-42235682 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 193, 82

Conread position: 10-370
Cow position: chrX:8797448-8797093 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 213, 73

Conread position: 10-372
Cow position: chrX:42171094-42171456 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 75

Conread position: 14-372
Cow position: chrX:5872513-5872157 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 72

Conread position: 16-351
Cow position: chrX:616063-616401 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 324

Conread position: 17-318
Cow position: chrX:6690071-6690363 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 34

Conread position: 17-365
Cow position: chrX:29680069-29680409 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 0

Conread position: 17-368
Cow position: chrX:878189-878525 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 11

Conread position: 21-325
Cow position: chrX:29121239-29120933 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 21-372
Cow position: chrX:43730036-43730371 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 0

Conread position: 22-353
Cow position: chrX:9365487-9365815 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 46, 54

Conread position: 23-207
Cow position: chrX:12191946-12191765 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 24-291
Cow position: chrX:23562816-23562556 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 24-372
Cow position: chrX:36068204-36067863 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 274

Conread position: 25-371
Cow position: chrX:31312213-31311870 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 51

Conread position: 25-372
Cow position: chrX:1104608-1104960 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 229
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 58

Conread position: 27-372
Cow position: chrX:38549630-38549292 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 21, 54

Conread position: 28-227
Cow position: chrX:36848396-36848592 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 160, 57

Conread position: 28-314
Cow position: chrX:16348392-16348672 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 193, 41

Conread position: 28-372
Cow position: chrX:34441270-34441608 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 15

Conread position: 29-372
Cow position: chrX:27393846-27394170 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 30-248
Cow position: chrX:40531864-40532080 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 189, 46

Conread position: 30-347
Cow position: chrX:48014614-48014306 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 46

Conread position: 31-324
Cow position: chrX:7695926-7695636 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 192, 42

Conread position: 31-372
Cow position: chrX:11073010-11073345 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 8

Conread position: 32-372
Cow position: chrX:40269671-40269328 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 309

Conread position: 33-372
Cow position: chrX:618830-619164 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 74

Conread position: 34-372
Cow position: chrX:32821202-32820872 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 61, 13

Conread position: 35-254
Cow position: chrX:27306630-27306410 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 15, 9

Conread position: 35-294
Cow position: chrX:5135346-5135607 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 90, 41

Conread position: 36-371
Cow position: chrX:4043694-4044006 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 36-372
Cow position: chrX:18694756-18695076 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 15

Conread position: 36-372
Cow position: chrX:23513845-23514171 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 290, 33

Conread position: 36-372
Cow position: chrX:38853373-38853040 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 111

Conread position: 37-370
Cow position: chrX:25035209-25035542 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 219
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 49

Conread position: 37-370
Cow position: chrX:37910614-37910293 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 221
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 180, 32

Conread position: 37-371
Cow position: chrX:34402177-34401843 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 235
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 82, 14

Conread position: 38-323
Cow position: chrX:46291303-46291028 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 174, 64

Conread position: 38-372
Cow position: chrX:6278325-6278662 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 23, 49

Conread position: 39-372
Cow position: chrX:6407713-6407392 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 214
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 37

Conread position: 39-372
Cow position: chrX:31250557-31250233 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 67, 7

Conread position: 40-357
Cow position: chrX:28878004-28878309 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 206
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 46

Conread position: 42-318
Cow position: chrX:169379-169646 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 263, 38

Conread position: 42-356
Cow position: chrX:11084896-11085201 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 259, 43

Conread position: 42-363
Cow position: chrX:41526362-41526672 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 173, 34

Conread position: 42-372
Cow position: chrX:22387082-22387404 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 258, 15

Conread position: 43-372
Cow position: chrX:38006606-38006924 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 283, 18

Conread position: 44-372
Cow position: chrX:9635027-9635337 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 293, 29

Conread position: 44-372
Cow position: chrX:42492359-42492671 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 216
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 251, 41

Conread position: 45-233
Cow position: chrX:38587679-38587865 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 46-272
Cow position: chrX:20957401-20957186 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 220, 30

Conread position: 46-291
Cow position: chrX:22115153-22115396 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 236, 29

Conread position: 46-325
Cow position: chrX:5017256-5017527 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 65

Conread position: 46-344
Cow position: chrX:26881401-26881701 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 31

Conread position: 46-367
Cow position: chrX:10831325-10831648 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 217
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 30

Conread position: 46-369
Cow position: chrX:15546044-15545738 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 209
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 259, 43

Conread position: 46-372
Cow position: chrX:12309223-12309545 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 29

Conread position: 46-372
Cow position: chrX:20339731-20340047 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 47

Conread position: 46-372
Cow position: chrX:21672724-21672395 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 44, 29

Conread position: 46-372
Cow position: chrX:22813225-22812904 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 215
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 27

Conread position: 46-372
Cow position: chrX:42247019-42247340 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 174, 39

Conread position: 46-372
Cow position: chrX:42380948-42381256 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 14, 30

Conread position: 47-372
Cow position: chrX:22822212-22821891 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 207
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 164

Conread position: 48-324
Cow position: chrX:43115311-43115039 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 167, 27

Conread position: 48-371
Cow position: chrX:24365660-24365989 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 219
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 17, 29

Conread position: 48-372
Cow position: chrX:34543945-34543630 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 214
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 45

Conread position: 50-203
Cow position: chrX:27668799-27668950 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 50-223
Cow position: chrX:32208664-32208834 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 25

Conread position: 50-223
Cow position: chrX:39290516-39290347 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 50-249
Cow position: chrX:6599623-6599821 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 170, 26

Conread position: 50-261
Cow position: chrX:22392826-22393035 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 169, 25

Conread position: 50-266
Cow position: chrX:35985976-35985764 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 170, 30

Conread position: 50-304
Cow position: chrX:1466322-1466069 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 50-308
Cow position: chrX:12095613-12095870 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 33

Conread position: 50-322
Cow position: chrX:34504891-34505157 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 84, 25

Conread position: 50-324
Cow position: chrX:42927665-42927931 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 50-344
Cow position: chrX:40685169-40685463 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 26

Conread position: 50-356
Cow position: chrX:34314183-34313889 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 25

Conread position: 50-364
Cow position: chrX:27175159-27174843 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 16, 37

Conread position: 50-369
Cow position: chrX:34532680-34532370 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 19

Conread position: 50-370
Cow position: chrX:4399280-4398971 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 50

Conread position: 50-370
Cow position: chrX:35543046-35542737 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 202, 26

Conread position: 50-371
Cow position: chrX:26493169-26492847 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 209
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 42

Conread position: 50-372
Cow position: chrX:6414200-6413888 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 26

Conread position: 50-372
Cow position: chrX:8869242-8869562 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 35

Conread position: 50-372
Cow position: chrX:10252040-10252339 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 121, 18

Conread position: 50-372
Cow position: chrX:22074959-22074644 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 90, 26

Conread position: 50-372
Cow position: chrX:24287771-24288089 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 66

Conread position: 50-372
Cow position: chrX:27431759-27432075 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 30

Conread position: 50-372
Cow position: chrX:29601667-29601989 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 277

Conread position: 50-372
Cow position: chrX:33855061-33855389 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 144, 25

Conread position: 50-372
Cow position: chrX:34377101-34376799 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 50-372
Cow position: chrX:34412005-34411684 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 26

Conread position: 50-372
Cow position: chrX:34503081-34502762 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 45, 63

Conread position: 50-372
Cow position: chrX:45846262-45845939 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 126

Conread position: 50-372
Cow position: chrX:47484102-47484428 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 208
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 49

Conread position: 51-347
Cow position: chrX:17888265-17888547 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 193
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 173, 29

Conread position: 51-349
Cow position: chrX:41027317-41027020 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 42

Conread position: 51-372
Cow position: chrX:18485964-18485638 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 215
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 50

Conread position: 51-372
Cow position: chrX:31252565-31252258 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 221, 29

Conread position: 52-327
Cow position: chrX:9650867-9651140 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 22

Conread position: 52-349
Cow position: chrX:5919654-5919359 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 64, 26

Conread position: 52-358
Cow position: chrX:32420373-32420071 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 61

Conread position: 52-372
Cow position: chrX:3654764-3654448 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 204
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 16

Conread position: 54-225
Cow position: chrX:12972840-12972667 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 23

Conread position: 54-269
Cow position: chrX:19469353-19469563 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 54-324
Cow position: chrX:30337800-30338054 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 25, 84

Conread position: 54-353
Cow position: chrX:11614847-11614558 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 245, 11

Conread position: 54-356
Cow position: chrX:41871221-41870933 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 156, 14

Conread position: 54-367
Cow position: chrX:9201702-9201395 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 7

Conread position: 54-370
Cow position: chrX:14275586-14275890 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 168, 221

Conread position: 54-371
Cow position: chrX:41878777-41879090 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 205
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 46

Conread position: 54-372
Cow position: chrX:7351456-7351139 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 48

Conread position: 54-372
Cow position: chrX:9416529-9416849 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 211
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 39

Conread position: 54-372
Cow position: chrX:12979679-12979987 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 156, 22

Conread position: 54-372
Cow position: chrX:13177319-13177621 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 131

Conread position: 54-372
Cow position: chrX:24424246-24424544 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 54-372
Cow position: chrX:27145759-27145467 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 0

Conread position: 54-372
Cow position: chrX:31436629-31436326 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-372
Cow position: chrX:34792158-34792467 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 54-372
Cow position: chrX:38094366-38094683 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 151, 20

Conread position: 54-372
Cow position: chrX:38218875-38218551 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 162

Conread position: 54-372
Cow position: chrX:38642403-38642101 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 272, 20

Conread position: 55-215
Cow position: chrX:2936114-2935953 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 55-306
Cow position: chrX:47345485-47345240 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 7

Conread position: 55-311
Cow position: chrX:18272901-18273156 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 35, 92

Conread position: 55-364
Cow position: chrX:5118345-5118654 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 31

Conread position: 55-365
Cow position: chrX:21986138-21986446 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 162, 20

Conread position: 55-372
Cow position: chrX:22482532-22482845 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 94

Conread position: 55-372
Cow position: chrX:44054960-44054645 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 209
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 58

Conread position: 55-372
Cow position: chrX:45502302-45501992 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 122, 158

Conread position: 56-229
Cow position: chrX:16836136-16836304 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 56-249
Cow position: chrX:19394711-19394515 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 56-327
Cow position: chrX:34836909-34837170 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 262, 141

Conread position: 56-357
Cow position: chrX:40557523-40557826 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 283

Conread position: 56-370
Cow position: chrX:15006997-15007308 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 243, 17

Conread position: 56-371
Cow position: chrX:5638017-5638321 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 213
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 18, 47

Conread position: 56-372
Cow position: chrX:45429868-45430173 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 165, 20

Conread position: 57-303
Cow position: chrX:29050400-29050156 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 155, 28

Conread position: 57-370
Cow position: chrX:11656233-11655934 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 19

Conread position: 57-371
Cow position: chrX:41884260-41884573 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 20

Conread position: 57-372
Cow position: chrX:9252010-9252334 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 243, 18

Conread position: 57-372
Cow position: chrX:37072541-37072249 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 269, 12

Conread position: 57-372
Cow position: chrX:37780956-37781274 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 18

Conread position: 57-372
Cow position: chrX:40035288-40035601 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 19

Conread position: 57-372
Cow position: chrX:46433642-46433326 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 207
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 7

Conread position: 58-303
Cow position: chrX:918564-918818 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 8

Conread position: 58-343
Cow position: chrX:45977077-45976789 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 160, 29

Conread position: 58-367
Cow position: chrX:1615895-1616199 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 159, 40

Conread position: 58-372
Cow position: chrX:17795134-17794829 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 143, 204

Conread position: 58-372
Cow position: chrX:30543134-30543447 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 141, 11

Conread position: 59-276
Cow position: chrX:12437120-12437334 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 60-255
Cow position: chrX:11325946-11326143 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 51

Conread position: 60-280
Cow position: chrX:4152882-4153103 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 146, 16

Conread position: 60-294
Cow position: chrX:41192853-41192626 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 61-360
Cow position: chrX:13647637-13647933 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 15

Conread position: 61-367
Cow position: chrX:32310256-32309954 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 197
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 190

Conread position: 61-370
Cow position: chrX:1503476-1503179 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 278, 14

Conread position: 61-372
Cow position: chrX:11633831-11633522 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 160, 14

Conread position: 61-372
Cow position: chrX:14883807-14884118 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 13

Conread position: 62-372
Cow position: chrX:45174999-45174688 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 166, 219

Conread position: 65-369
Cow position: chrX:45110800-45110502 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 11

Conread position: 65-370
Cow position: chrX:7572050-7571752 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 16

Conread position: 65-372
Cow position: chrX:33493921-33493618 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 10

Conread position: 65-372
Cow position: chrX:35273515-35273196 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 79

Conread position: 70-324
Cow position: chrX:14973605-14973853 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 232, 91

Conread position: 70-347
Cow position: chrX:37986366-37986098 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 153, 63

Conread position: 70-370
Cow position: chrX:22624619-22624326 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 7, 204

Conread position: 71-277
Cow position: chrX:46429679-46429885 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 149, 188

Conread position: 71-372
Cow position: chrX:41068865-41068571 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 197
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 238

Conread position: 72-364
Cow position: chrX:37119731-37119445 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 158, 17

Conread position: 72-372
Cow position: chrX:46072678-46072977 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 134, 256

Conread position: 75-368
Cow position: chrX:20584464-20584166 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 130

Conread position: 77-372
Cow position: chrX:6544388-6544100 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 142, 69

Conread position: 77-372
Cow position: chrX:37232541-37232253 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 122

Conread position: 78-321
Cow position: chrX:29230132-29229901 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 128, 0

Conread position: 80-372
Cow position: chrX:35224427-35224142 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 138, 0

Conread position: 85-371
Cow position: chrX:42469815-42470092 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 84, 74

Conread position: 85-372
Cow position: chrX:37574966-37574700 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 137, 0

Conread position: 89-356
Cow position: chrX:19273585-19273863 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 118, 253

Conread position: 91-372
Cow position: chrX:47362503-47362768 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 167

Conread position: 92-278
Cow position: chrX:12082205-12082391 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 130, 59

Conread position: 98-372
Cow position: chrX:29289691-29289420 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 206, 112

Conread position: 99-353
Cow position: chrX:21566519-21566261 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 242

Conread position: 99-356
Cow position: chrX:38936812-38936556 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 198

Conread position: 99-370
Cow position: chrX:8925811-8925551 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 99-370
Cow position: chrX:10959283-10959555 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 131, 113

Conread position: 99-372
Cow position: chrX:7509251-7508982 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 39

Conread position: 99-372
Cow position: chrX:10411874-10412145 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 233, 118

Conread position: 99-372
Cow position: chrX:11082510-11082770 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 129, 157

Conread position: 99-372
Cow position: chrX:17662486-17662753 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 107, 51

Conread position: 101-371
Cow position: chrX:13913185-13912925 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 87, 109

Conread position: 101-372
Cow position: chrX:47344406-47344138 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 180

Conread position: 102-372
Cow position: chrX:26625562-26625833 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 107, 172

Conread position: 110-370
Cow position: chrX:27228227-27227969 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 189, 112

Conread position: 110-370
Cow position: chrX:43779746-43780007 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 195, 112

Conread position: 110-372
Cow position: chrX:7722089-7721828 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 102, 56

Conread position: 110-372
Cow position: chrX:11856531-11856272 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 119, 151

Conread position: 111-324
Cow position: chrX:33539270-33539053 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 154, 85

Conread position: 111-347
Cow position: chrX:7646351-7646121 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 104, 89

Conread position: 114-359
Cow position: chrX:38066358-38066597 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 108, 127

Conread position: 114-372
Cow position: chrX:27680495-27680245 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 109, 168

Conread position: 114-372
Cow position: chrX:45414207-45414456 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 106, 84

Conread position: 115-264
Cow position: chrX:44095356-44095204 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 115-356
Cow position: chrX:27685345-27685103 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 102

Conread position: 119-323
Cow position: chrX:40826659-40826866 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 181, 83

Conread position: 119-347
Cow position: chrX:15815176-15814952 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 207, 86

Conread position: 119-359
Cow position: chrX:842249-842010 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 159, 91

Conread position: 119-370
Cow position: chrX:21642390-21642634 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 176, 81

Conread position: 119-370
Cow position: chrX:35258639-35258886 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 185, 98

Conread position: 119-371
Cow position: chrX:46587914-46587662 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 96, 212

Conread position: 119-372
Cow position: chrX:8917486-8917236 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 185, 103

Conread position: 119-372
Cow position: chrX:17231827-17231578 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 104, 127

Conread position: 119-372
Cow position: chrX:21004776-21004525 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 104, 137

Conread position: 119-372
Cow position: chrX:23563699-23563953 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 184, 107

Conread position: 119-372
Cow position: chrX:23583653-23583402 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 105

Conread position: 119-372
Cow position: chrX:29544785-29545036 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 101

Conread position: 119-372
Cow position: chrX:33000997-33000747 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 22

Conread position: 119-372
Cow position: chrX:45403733-45403990 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 66

Conread position: 119-372
Cow position: chrX:46722642-46722897 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 59

Conread position: 120-367
Cow position: chrX:25338279-25338028 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 92, 117

Conread position: 120-371
Cow position: chrX:26440694-26440935 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 185, 47

Conread position: 120-372
Cow position: chrX:30133227-30133485 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 99, 92

Conread position: 121-364
Cow position: chrX:12405291-12405539 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 132

Conread position: 121-364
Cow position: chrX:18650951-18651193 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 109

Conread position: 121-370
Cow position: chrX:10129098-10128850 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 183, 108

Conread position: 121-370
Cow position: chrX:16289471-16289716 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 184, 55

Conread position: 121-370
Cow position: chrX:23340880-23341122 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 65

Conread position: 121-372
Cow position: chrX:29542127-29542375 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 98, 217

Conread position: 124-370
Cow position: chrX:17542047-17541809 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 146

Conread position: 132-366
Cow position: chrX:11589509-11589742 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 173, 83

Conread position: 138-357
Cow position: chrX:13785287-13785508 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 143

Conread position: 141-371
Cow position: chrX:26875811-26876038 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 79, 197

Conread position: 147-372
Cow position: chrX:34192734-34192520 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 49

Conread position: 155-372
Cow position: chrX:42875039-42874821 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 145, 55

Conread position: 156-357
Cow position: chrX:34991091-34990890 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 103

Conread position: 164-372
Cow position: chrX:42461697-42461902 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 168-372
Cow position: chrX:19015480-19015286 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 82

Conread position: 168-372
Cow position: chrX:36961684-36961479 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 137, 42

Conread position: 170-372
Cow position: chrX:42994654-42994456 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 135, 47

Conread position: 174-369
Cow position: chrX:20791778-20791976 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 110

Conread position: 175-370
Cow position: chrX:41743950-41743758 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 153

Conread position: 178-372
Cow position: chrX:38439514-38439318 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 46, 150

Conread position: 189-372
Cow position: chrX:4750281-4750460 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 165, 0

Conread position: 189-372
Cow position: chrX:20583044-20582874 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 63

Conread position: 194-365
Cow position: chrX:1946695-1946865 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 40

Conread position: 200-364
Cow position: chrX:4951785-4951620 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 15

Conread position: 206-370
Cow position: chrX:25458625-25458791 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 20

Conread position: 212-362
Cow position: chrX:11806013-11806163 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 120

Conread position: 213-372
Cow position: chrX:14003641-14003801 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 216-360
Cow position: chrX:9997337-9997483 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 123

Conread position: 216-372
Cow position: chrX:35387906-35388062 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 110, 121

Conread position: 218-372
Cow position: chrX:30832854-30833002 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 12, 40

Conread position: 218-372
Cow position: chrX:31256860-31256711 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 0

Show alignments to all cow chromosomes.