Cow genome map

Conread name: Ss1.1-rpigcf0_007062.5

Conread position: 1-219
Cow position: chr21:21077569-21077779 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 39, 58

Conread position: 1-276
Cow position: chr21:7377965-7377684 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 47, 77

Conread position: 1-283
Cow position: chr21:16914739-16915027 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 11

Conread position: 1-283
Cow position: chr21:17559966-17559670 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 11

Conread position: 1-283
Cow position: chr21:48527373-48527662 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 11

Conread position: 3-231
Cow position: chr21:36297454-36297685 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 44, 55

Conread position: 3-234
Cow position: chr21:19673769-19674000 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 58

Conread position: 3-234
Cow position: chr21:40168663-40168432 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 153

Conread position: 3-237
Cow position: chr21:33414120-33413891 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 3-281
Cow position: chr21:46849164-46848889 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 71

Conread position: 3-283
Cow position: chr21:5238350-5238634 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 47, 73

Conread position: 3-283
Cow position: chr21:30222309-30222588 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 8

Conread position: 3-283
Cow position: chr21:30848983-30848702 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 8

Conread position: 3-283
Cow position: chr21:33982841-33982568 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 44, 8

Conread position: 3-288
Cow position: chr21:37640521-37640817 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 44, 58

Conread position: 3-300
Cow position: chr21:9311009-9311317 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 72

Conread position: 4-227
Cow position: chr21:5392575-5392350 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 209

Conread position: 4-262
Cow position: chr21:9416213-9416475 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 45, 77

Conread position: 5-231
Cow position: chr21:33688-33910 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 8

Conread position: 5-270
Cow position: chr21:36696124-36695854 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 71

Conread position: 5-281
Cow position: chr21:5464714-5464991 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 7

Conread position: 5-283
Cow position: chr21:21686386-21686663 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 7

Conread position: 5-283
Cow position: chr21:42501005-42501298 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 5-284
Cow position: chr21:17875224-17874943 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 8

Conread position: 6-283
Cow position: chr21:22850886-22851161 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 93

Conread position: 7-283
Cow position: chr21:5898431-5898162 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 7-283
Cow position: chr21:23672718-23672991 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 71

Conread position: 7-290
Cow position: chr21:6997908-6998194 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 42, 66

Conread position: 8-195
Cow position: chr21:41878440-41878624 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 64

Conread position: 8-197
Cow position: chr21:20418715-20418525 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 8-206
Cow position: chr21:36789760-36789962 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 8-214
Cow position: chr21:8235585-8235388 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 68

Conread position: 8-216
Cow position: chr21:471646-471850 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 67

Conread position: 8-217
Cow position: chr21:25628941-25628735 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 53

Conread position: 8-217
Cow position: chr21:30607120-30606919 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 41, 176

Conread position: 8-219
Cow position: chr21:10001044-10001254 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 71

Conread position: 8-226
Cow position: chr21:15911369-15911586 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 141

Conread position: 8-227
Cow position: chr21:15976603-15976819 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 12

Conread position: 8-227
Cow position: chr21:47363769-47363546 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 8-231
Cow position: chr21:734565-734780 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 69

Conread position: 8-231
Cow position: chr21:7581937-7581714 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 65

Conread position: 8-231
Cow position: chr21:23322107-23321887 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 11

Conread position: 8-232
Cow position: chr21:26244889-26245106 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 8-234
Cow position: chr21:42007494-42007270 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 40, 102

Conread position: 8-234
Cow position: chr21:42384479-42384703 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 65

Conread position: 8-234
Cow position: chr21:43259192-43259415 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 192, 46

Conread position: 8-234
Cow position: chr21:46912509-46912739 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 50

Conread position: 8-235
Cow position: chr21:45921089-45920866 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 61

Conread position: 8-253
Cow position: chr21:27146020-27145772 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 65

Conread position: 8-265
Cow position: chr21:36909904-36910158 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 63

Conread position: 8-270
Cow position: chr21:17455355-17455618 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 173
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 58

Conread position: 8-275
Cow position: chr21:28733945-28733673 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 111

Conread position: 8-280
Cow position: chr21:19196193-19195918 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 65

Conread position: 8-280
Cow position: chr21:21907460-21907199 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 41, 67

Conread position: 8-281
Cow position: chr21:10883955-10883674 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 8-281
Cow position: chr21:13840294-13840572 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 155

Conread position: 8-281
Cow position: chr21:17982945-17983216 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 57, 151

Conread position: 8-281
Cow position: chr21:19060118-19059847 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 69

Conread position: 8-281
Cow position: chr21:23980211-23979935 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 53

Conread position: 8-281
Cow position: chr21:27521362-27521097 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 212, 67

Conread position: 8-281
Cow position: chr21:30835332-30835610 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 116

Conread position: 8-281
Cow position: chr21:32339768-32339501 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 68

Conread position: 8-283
Cow position: chr21:47006-47293 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 8-283
Cow position: chr21:868956-868673 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 64, 72

Conread position: 8-283
Cow position: chr21:3585394-3585118 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 218, 12

Conread position: 8-283
Cow position: chr21:4281902-4281637 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 8-283
Cow position: chr21:7394351-7394615 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 41, 68

Conread position: 8-283
Cow position: chr21:8349297-8349568 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 39, 74

Conread position: 8-283
Cow position: chr21:10004918-10004637 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 67

Conread position: 8-283
Cow position: chr21:10410189-10410469 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 87

Conread position: 8-283
Cow position: chr21:10657133-10656855 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 53

Conread position: 8-283
Cow position: chr21:12462001-12461723 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 202
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 41, 214

Conread position: 8-283
Cow position: chr21:13842457-13842739 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 34, 64

Conread position: 8-283
Cow position: chr21:15445104-15444836 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 40, 85

Conread position: 8-283
Cow position: chr21:16152405-16152686 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 8-283
Cow position: chr21:17193784-17193502 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 41, 89

Conread position: 8-283
Cow position: chr21:17890272-17890549 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 41, 51

Conread position: 8-283
Cow position: chr21:20152923-20153203 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 41, 186

Conread position: 8-283
Cow position: chr21:20160647-20160924 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 65

Conread position: 8-283
Cow position: chr21:23535684-23535959 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 228, 11

Conread position: 8-283
Cow position: chr21:28244438-28244713 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 115

Conread position: 8-283
Cow position: chr21:28919555-28919285 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 70

Conread position: 8-283
Cow position: chr21:29014944-29014671 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 53

Conread position: 8-283
Cow position: chr21:30231722-30231450 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 216, 41

Conread position: 8-283
Cow position: chr21:34010428-34010150 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 94

Conread position: 8-283
Cow position: chr21:36910709-36910983 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 40, 55

Conread position: 8-283
Cow position: chr21:37706448-37706166 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 11

Conread position: 8-283
Cow position: chr21:38449478-38449206 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 41, 131

Conread position: 8-283
Cow position: chr21:38900747-38901009 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 8-283
Cow position: chr21:39403567-39403282 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 8-283
Cow position: chr21:40266093-40266370 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 68

Conread position: 8-283
Cow position: chr21:41140748-41140469 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 75

Conread position: 8-283
Cow position: chr21:41155832-41156117 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 56, 49

Conread position: 8-283
Cow position: chr21:45971202-45970933 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 35, 78

Conread position: 8-284
Cow position: chr21:3361044-3360769 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 143, 75

Conread position: 8-284
Cow position: chr21:41974406-41974120 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 65

Conread position: 8-284
Cow position: chr21:42209662-42209398 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 196

Conread position: 8-289
Cow position: chr21:10292461-10292746 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 50

Conread position: 8-289
Cow position: chr21:14760543-14760809 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 72, 32

Conread position: 8-290
Cow position: chr21:4399772-4400046 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 39, 83

Conread position: 8-292
Cow position: chr21:34151553-34151831 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 53

Conread position: 8-298
Cow position: chr21:15584451-15584161 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 41, 65

Conread position: 8-298
Cow position: chr21:31253513-31253794 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 60

Conread position: 8-303
Cow position: chr21:23586849-23587140 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 38, 186

Conread position: 8-307
Cow position: chr21:10114364-10114063 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 41, 118

Conread position: 8-397
Cow position: chr21:40432419-40432819 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 265
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 179, 64

Conread position: 9-189
Cow position: chr21:34391005-34390826 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 68

Conread position: 9-234
Cow position: chr21:25127574-25127798 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 15

Conread position: 9-262
Cow position: chr21:29978790-29978539 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 67

Conread position: 9-275
Cow position: chr21:6624130-6624397 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 227, 41

Conread position: 9-280
Cow position: chr21:41579726-41579998 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 37

Conread position: 9-281
Cow position: chr21:20165611-20165884 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 52

Conread position: 9-283
Cow position: chr21:8206738-8207003 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 169

Conread position: 9-283
Cow position: chr21:14452206-14452479 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 227, 41

Conread position: 9-283
Cow position: chr21:36763019-36763308 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 40, 0

Conread position: 9-283
Cow position: chr21:47465152-47464873 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 6, 50

Conread position: 9-284
Cow position: chr21:10007669-10007390 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 22

Conread position: 9-284
Cow position: chr21:13048225-13047943 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 9-284
Cow position: chr21:17637871-17638142 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 49

Conread position: 9-284
Cow position: chr21:22194142-22193847 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 9-284
Cow position: chr21:40899311-40899588 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 219, 42

Conread position: 9-289
Cow position: chr21:6317710-6317433 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 68

Conread position: 9-297
Cow position: chr21:40589515-40589222 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 69

Conread position: 10-217
Cow position: chr21:45262841-45262633 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 5, 34

Conread position: 10-219
Cow position: chr21:24642491-24642691 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 40, 63

Conread position: 10-241
Cow position: chr21:36795571-36795804 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 72

Conread position: 10-262
Cow position: chr21:1059049-1059290 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 88

Conread position: 10-281
Cow position: chr21:3763768-3763507 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 60

Conread position: 10-281
Cow position: chr21:6051478-6051749 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 204, 59

Conread position: 10-283
Cow position: chr21:5426912-5427173 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 39, 63

Conread position: 10-283
Cow position: chr21:22014158-22014437 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 88

Conread position: 10-283
Cow position: chr21:22210273-22209997 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 63

Conread position: 10-283
Cow position: chr21:28237741-28237453 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 63

Conread position: 10-283
Cow position: chr21:30592333-30592068 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 61, 28

Conread position: 10-283
Cow position: chr21:41621095-41621374 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 62

Conread position: 10-283
Cow position: chr21:47009265-47009001 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 97, 86

Conread position: 10-284
Cow position: chr21:15544247-15543992 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 63

Conread position: 10-297
Cow position: chr21:42135649-42135361 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 85

Conread position: 11-202
Cow position: chr21:46141016-46141210 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 78

Conread position: 11-212
Cow position: chr21:42841628-42841425 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 11-214
Cow position: chr21:37345125-37344927 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 59

Conread position: 12-283
Cow position: chr21:5970865-5970600 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 49

Conread position: 12-283
Cow position: chr21:6834023-6834296 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 64

Conread position: 12-283
Cow position: chr21:17183896-17184164 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 64

Conread position: 12-284
Cow position: chr21:23568194-23568472 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 63, 38

Conread position: 12-306
Cow position: chr21:37790027-37789732 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 30, 46

Conread position: 13-220
Cow position: chr21:42414127-42413917 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 13-234
Cow position: chr21:10538276-10538061 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 18

Conread position: 13-277
Cow position: chr21:22856194-22856460 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 45

Conread position: 13-283
Cow position: chr21:27863541-27863273 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 188

Conread position: 13-283
Cow position: chr21:38720226-38720495 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 54

Conread position: 13-283
Cow position: chr21:43388325-43388607 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 72

Conread position: 14-180
Cow position: chr21:44515238-44515404 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 44

Conread position: 14-219
Cow position: chr21:395845-396046 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 59

Conread position: 14-226
Cow position: chr21:13365313-13365527 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 119

Conread position: 14-234
Cow position: chr21:21169517-21169302 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 64

Conread position: 14-241
Cow position: chr21:29484954-29485179 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 44

Conread position: 14-265
Cow position: chr21:16569876-16570123 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 64

Conread position: 14-269
Cow position: chr21:31691457-31691706 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 136

Conread position: 14-283
Cow position: chr21:8950155-8950439 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 59

Conread position: 14-283
Cow position: chr21:22860974-22861238 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 35, 44

Conread position: 14-283
Cow position: chr21:44214099-44214357 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 44

Conread position: 14-284
Cow position: chr21:6713551-6713277 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 33, 72

Conread position: 14-288
Cow position: chr21:641561-641835 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 33, 66

Conread position: 14-312
Cow position: chr21:11644995-11644692 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 284

Conread position: 16-283
Cow position: chr21:18318690-18318959 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 45

Conread position: 17-283
Cow position: chr21:12104342-12104599 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 16

Conread position: 19-241
Cow position: chr21:12801772-12801544 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 19-253
Cow position: chr21:45329966-45329738 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 13, 43

Conread position: 19-283
Cow position: chr21:7673100-7673359 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 28, 39

Conread position: 19-290
Cow position: chr21:33580401-33580664 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 30, 53

Conread position: 19-308
Cow position: chr21:29069349-29069051 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 20-283
Cow position: chr21:28030269-28030525 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 53

Conread position: 21-290
Cow position: chr21:44829780-44829503 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 23-232
Cow position: chr21:30980593-30980386 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 9

Conread position: 26-234
Cow position: chr21:13089483-13089280 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 112

Conread position: 26-234
Cow position: chr21:27429446-27429645 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 26-262
Cow position: chr21:19258811-19259041 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 35

Conread position: 26-283
Cow position: chr21:11740134-11739873 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 32

Conread position: 26-283
Cow position: chr21:12154120-12154371 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 35

Conread position: 26-283
Cow position: chr21:24296778-24296519 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 150, 34

Conread position: 26-283
Cow position: chr21:27229807-27229557 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 32

Conread position: 26-283
Cow position: chr21:34654063-34654316 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 31, 0

Conread position: 26-283
Cow position: chr21:37299447-37299706 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 25

Conread position: 26-283
Cow position: chr21:47714018-47713761 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 53

Conread position: 26-284
Cow position: chr21:47760756-47761018 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 32

Conread position: 26-290
Cow position: chr21:44962781-44963050 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 41

Conread position: 27-225
Cow position: chr21:25764622-25764820 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 136
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 33

Conread position: 28-283
Cow position: chr21:14126276-14126518 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 30

Conread position: 28-283
Cow position: chr21:38918192-38918448 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 34

Conread position: 30-284
Cow position: chr21:10817014-10817281 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 31-226
Cow position: chr21:26648019-26647830 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 18, 99

Conread position: 31-234
Cow position: chr21:28924102-28924302 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 50

Conread position: 31-262
Cow position: chr21:7768426-7768660 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 31-280
Cow position: chr21:829220-828967 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 159

Conread position: 31-282
Cow position: chr21:10264024-10264280 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 39

Conread position: 31-283
Cow position: chr21:44724373-44724130 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 18, 30

Conread position: 31-283
Cow position: chr21:49700042-49699791 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 189, 19

Conread position: 31-284
Cow position: chr21:44251851-44251594 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 16, 36

Conread position: 31-288
Cow position: chr21:14464576-14464837 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 111, 19

Conread position: 31-288
Cow position: chr21:24858305-24858567 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 18, 27

Conread position: 32-283
Cow position: chr21:13656642-13656388 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 25

Conread position: 32-293
Cow position: chr21:24598646-24598899 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 28

Conread position: 36-231
Cow position: chr21:3400837-3400641 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 68, 118

Conread position: 36-283
Cow position: chr21:8546021-8545774 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 40

Conread position: 38-315
Cow position: chr21:36508240-36508512 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 38

Conread position: 39-219
Cow position: chr21:9334486-9334667 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 6

Conread position: 39-262
Cow position: chr21:17642983-17642764 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 40-233
Cow position: chr21:27341591-27341402 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 56

Conread position: 40-239
Cow position: chr21:31159405-31159596 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 185, 30

Conread position: 40-281
Cow position: chr21:13588764-13589006 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 184, 94

Conread position: 40-283
Cow position: chr21:12916419-12916172 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 196, 32

Conread position: 40-283
Cow position: chr21:18568638-18568391 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 178, 44

Conread position: 40-283
Cow position: chr21:22718782-22718537 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 185, 20

Conread position: 40-301
Cow position: chr21:41918244-41917971 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 117

Conread position: 44-283
Cow position: chr21:29658285-29658520 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 154, 16

Conread position: 45-234
Cow position: chr21:2657815-2658003 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 45-283
Cow position: chr21:8431095-8430851 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 23, 15

Conread position: 45-283
Cow position: chr21:10147998-10148245 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 78, 29

Conread position: 45-284
Cow position: chr21:16604311-16604067 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 21, 38

Conread position: 46-278
Cow position: chr21:31652400-31652628 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 175, 14

Conread position: 48-219
Cow position: chr21:7583856-7584029 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 48-234
Cow position: chr21:19360167-19359982 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 9

Conread position: 48-240
Cow position: chr21:38121109-38121302 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 9

Conread position: 48-253
Cow position: chr21:9990520-9990727 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 176, 31

Conread position: 48-270
Cow position: chr21:643334-643556 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 179, 24

Conread position: 48-270
Cow position: chr21:39319404-39319174 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 25, 10

Conread position: 48-277
Cow position: chr21:9819518-9819287 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 188

Conread position: 48-281
Cow position: chr21:8426456-8426687 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 218, 9

Conread position: 48-283
Cow position: chr21:71595-71832 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 9

Conread position: 48-283
Cow position: chr21:742295-742520 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 9

Conread position: 48-283
Cow position: chr21:9477177-9477410 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 183, 24

Conread position: 48-283
Cow position: chr21:32559351-32559125 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 202, 9

Conread position: 48-288
Cow position: chr21:46599369-46599609 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 12

Conread position: 48-296
Cow position: chr21:19240867-19240619 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 205

Conread position: 49-290
Cow position: chr21:41287784-41287543 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 51-283
Cow position: chr21:36682334-36682572 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 6

Conread position: 52-283
Cow position: chr21:7169700-7169933 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 32

Conread position: 52-283
Cow position: chr21:45906608-45906375 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 95, 20

Conread position: 56-283
Cow position: chr21:31279276-31279499 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 57-284
Cow position: chr21:41590549-41590319 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 59-236
Cow position: chr21:46612775-46612601 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 59-283
Cow position: chr21:48637736-48637509 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 165, 18

Conread position: 60-278
Cow position: chr21:17403827-17403606 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 174, 21

Conread position: 60-283
Cow position: chr21:28907522-28907303 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 110, 12

Conread position: 61-231
Cow position: chr21:712962-713134 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 61-234
Cow position: chr21:27569150-27568980 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 79

Conread position: 61-283
Cow position: chr21:42144850-42145065 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 159, 14

Conread position: 61-284
Cow position: chr21:8713937-8713710 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 152, 14

Conread position: 62-281
Cow position: chr21:12739103-12739332 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 17

Conread position: 62-283
Cow position: chr21:6851195-6851411 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 7, 14

Conread position: 62-284
Cow position: chr21:19561545-19561317 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 15

Conread position: 63-282
Cow position: chr21:37838043-37837833 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 156, 0

Conread position: 63-290
Cow position: chr21:9278548-9278781 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 52, 12

Conread position: 64-233
Cow position: chr21:11057853-11057688 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 64-283
Cow position: chr21:18059936-18059713 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 11

Conread position: 64-283
Cow position: chr21:42328638-42328415 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 163, 8

Conread position: 65-291
Cow position: chr21:10423133-10423364 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 162, 0

Conread position: 66-283
Cow position: chr21:19702755-19702976 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 132

Conread position: 66-283
Cow position: chr21:24797684-24797901 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 155, 11

Conread position: 66-283
Cow position: chr21:24875378-24875598 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 0

Conread position: 66-283
Cow position: chr21:26018404-26018627 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 18, 106

Conread position: 67-281
Cow position: chr21:10978920-10978703 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 152, 10

Conread position: 68-229
Cow position: chr21:17265973-17265811 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 133

Conread position: 68-283
Cow position: chr21:20163735-20163953 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 194

Conread position: 68-284
Cow position: chr21:17252948-17252730 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 146, 7

Conread position: 68-290
Cow position: chr21:46809742-46809511 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 39, 9

Conread position: 69-281
Cow position: chr21:27677511-27677727 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 154, 64

Conread position: 69-288
Cow position: chr21:40475529-40475752 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 154, 15

Conread position: 69-307
Cow position: chr21:29214132-29213885 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 70-281
Cow position: chr21:938050-938265 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 43

Conread position: 71-283
Cow position: chr21:13580444-13580661 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 165, 136

Conread position: 72-290
Cow position: chr21:12310509-12310726 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 155, 99

Conread position: 74-280
Cow position: chr21:11625777-11625989 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 65

Conread position: 74-283
Cow position: chr21:16498553-16498761 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 155, 63

Conread position: 74-288
Cow position: chr21:82101-82310 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 173, 0

Conread position: 74-294
Cow position: chr21:7825157-7824933 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 54

Conread position: 75-281
Cow position: chr21:19868919-19868718 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 75-283
Cow position: chr21:6584103-6583894 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 19

Conread position: 76-217
Cow position: chr21:33210224-33210365 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 76-283
Cow position: chr21:20213742-20213525 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 77-232
Cow position: chr21:41597848-41598003 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 77-283
Cow position: chr21:24266528-24266315 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 11

Conread position: 77-283
Cow position: chr21:47719262-47719058 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 159, 93

Conread position: 77-288
Cow position: chr21:25344898-25345115 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 146, 0

Conread position: 77-292
Cow position: chr21:21615819-21616031 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 193, 0

Conread position: 78-280
Cow position: chr21:39393786-39393991 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 112, 0

Conread position: 78-283
Cow position: chr21:7066343-7066139 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 22

Conread position: 78-298
Cow position: chr21:40291708-40291490 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 149, 51

Conread position: 79-234
Cow position: chr21:13163898-13164053 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 80-283
Cow position: chr21:802277-802077 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 186, 144

Conread position: 80-283
Cow position: chr21:16083077-16082866 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 80-284
Cow position: chr21:44074731-44074939 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 156, 48

Conread position: 81-282
Cow position: chr21:17842956-17842750 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 155, 103

Conread position: 83-283
Cow position: chr21:13225758-13225963 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 140, 173

Conread position: 86-288
Cow position: chr21:18341264-18341470 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 193

Conread position: 87-284
Cow position: chr21:25014979-25014793 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 89-266
Cow position: chr21:6736140-6735964 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 130, 0

Conread position: 89-283
Cow position: chr21:41040993-41041194 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 132, 121

Conread position: 90-270
Cow position: chr21:6153852-6154036 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 137, 7

Conread position: 91-240
Cow position: chr21:8978500-8978646 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 91-283
Cow position: chr21:27712192-27711988 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 91-283
Cow position: chr21:37928700-37928897 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 133, 183

Conread position: 92-283
Cow position: chr21:2537087-2536890 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 127, 0

Conread position: 92-283
Cow position: chr21:40820801-40820605 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 131, 108

Conread position: 93-222
Cow position: chr21:8687090-8686961 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 93-279
Cow position: chr21:25012135-25012320 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 94-283
Cow position: chr21:15012493-15012677 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 97-283
Cow position: chr21:1735321-1735139 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 0

Conread position: 97-283
Cow position: chr21:19161769-19161961 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 139, 0

Conread position: 97-284
Cow position: chr21:11099913-11099722 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 11

Conread position: 100-283
Cow position: chr21:31659087-31658908 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 102-284
Cow position: chr21:8506484-8506300 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 102-284
Cow position: chr21:8509372-8509188 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 118, 0

Conread position: 103-283
Cow position: chr21:11182616-11182795 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 121, 99

Conread position: 103-283
Cow position: chr21:12348828-12349014 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 103-290
Cow position: chr21:27409669-27409485 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 85

Conread position: 106-282
Cow position: chr21:22211319-22211501 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 106-283
Cow position: chr21:21940341-21940165 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 106-283
Cow position: chr21:48482462-48482284 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 110, 22

Conread position: 107-283
Cow position: chr21:35252514-35252693 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 24, 114

Conread position: 108-283
Cow position: chr21:12322565-12322744 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 109-277
Cow position: chr21:15869759-15869927 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 110-269
Cow position: chr21:13883551-13883714 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 67, 116

Conread position: 110-283
Cow position: chr21:20174388-20174558 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 134, 109

Conread position: 110-290
Cow position: chr21:14745839-14746025 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 112-234
Cow position: chr21:42131283-42131161 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 112-281
Cow position: chr21:4108847-4109021 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 112-283
Cow position: chr21:745247-745416 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 112-283
Cow position: chr21:5214420-5214598 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 112-283
Cow position: chr21:42017531-42017355 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 111, 151

Conread position: 112-284
Cow position: chr21:34738649-34738818 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 158

Conread position: 112-290
Cow position: chr21:18783397-18783213 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 112-297
Cow position: chr21:27810462-27810650 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 105, 26

Conread position: 113-283
Cow position: chr21:7201222-7201397 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 113-283
Cow position: chr21:36115676-36115853 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 114-269
Cow position: chr21:12640544-12640705 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 114-282
Cow position: chr21:40457673-40457853 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 144

Conread position: 114-283
Cow position: chr21:43316821-43316646 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 115-307
Cow position: chr21:30657945-30658129 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 116-283
Cow position: chr21:18449829-18450001 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 120, 36

Conread position: 120-283
Cow position: chr21:15271357-15271193 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 105, 155

Conread position: 120-283
Cow position: chr21:15305219-15305049 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 120-283
Cow position: chr21:45376031-45376193 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 18

Conread position: 120-284
Cow position: chr21:7539448-7539278 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 123-283
Cow position: chr21:11779458-11779292 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 97, 44

Conread position: 124-283
Cow position: chr21:11006687-11006522 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 79

Conread position: 124-283
Cow position: chr21:16796935-16797098 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 89, 153

Conread position: 124-284
Cow position: chr21:1283816-1283974 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 129-227
Cow position: chr21:28617877-28617975 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 129-256
Cow position: chr21:13134690-13134822 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 94, 18

Conread position: 129-282
Cow position: chr21:27567983-27568139 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 94, 71

Conread position: 129-282
Cow position: chr21:27744114-27744274 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 92, 82

Conread position: 129-282
Cow position: chr21:41737997-41738153 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 123

Conread position: 129-283
Cow position: chr21:1464432-1464589 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 147

Conread position: 129-283
Cow position: chr21:30938577-30938420 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 130-283
Cow position: chr21:28882271-28882429 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 130-284
Cow position: chr21:7460697-7460852 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 89, 0

Conread position: 131-279
Cow position: chr21:11678221-11678080 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 138-274
Cow position: chr21:42905300-42905158 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 138-283
Cow position: chr21:24757038-24757183 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 138-283
Cow position: chr21:32536494-32536637 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 138-283
Cow position: chr21:38482477-38482628 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 138-303
Cow position: chr21:18056031-18055864 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 65

Conread position: 139-241
Cow position: chr21:19665803-19665701 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 139-280
Cow position: chr21:11353159-11353306 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 139-281
Cow position: chr21:9314903-9315045 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 86

Conread position: 139-281
Cow position: chr21:29011871-29011732 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 14

Conread position: 139-283
Cow position: chr21:3379653-3379507 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 139-283
Cow position: chr21:6291845-6291995 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 139-283
Cow position: chr21:8351194-8351048 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 139-283
Cow position: chr21:21158910-21159049 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 139-283
Cow position: chr21:29418667-29418817 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 139-283
Cow position: chr21:31462661-31462803 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 139-283
Cow position: chr21:40930376-40930230 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 139-283
Cow position: chr21:48334693-48334539 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 140-280
Cow position: chr21:45537284-45537431 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 140-281
Cow position: chr21:3135769-3135624 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 136

Conread position: 140-290
Cow position: chr21:8359125-8358976 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 132, 0

Conread position: 140-305
Cow position: chr21:18495321-18495482 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 142-283
Cow position: chr21:30970037-30970181 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 119

Conread position: 142-293
Cow position: chr21:36398461-36398311 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 149, 81

Conread position: 143-284
Cow position: chr21:5344981-5345128 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 145-283
Cow position: chr21:21772194-21772338 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 145-284
Cow position: chr21:34727312-34727451 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 26

Conread position: 145-307
Cow position: chr21:43655807-43655976 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 69, 47

Conread position: 146-283
Cow position: chr21:7424908-7424767 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 146-283
Cow position: chr21:42189650-42189514 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 147-278
Cow position: chr21:8558368-8558236 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 149-283
Cow position: chr21:12473951-12473816 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 18

Conread position: 152-283
Cow position: chr21:16120049-16119916 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 122

Conread position: 152-283
Cow position: chr21:38943496-38943362 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 91

Conread position: 152-307
Cow position: chr21:31258578-31258739 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 71, 144

Conread position: 153-323
Cow position: chr21:19340119-19339945 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 165

Conread position: 154-283
Cow position: chr21:5218823-5218954 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 155-283
Cow position: chr21:48205106-48204972 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 158-283
Cow position: chr21:23783724-23783602 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 158-283
Cow position: chr21:30359227-30359104 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 161-283
Cow position: chr21:24222392-24222271 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 161-283
Cow position: chr21:30977142-30977022 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 161-283
Cow position: chr21:42341817-42341695 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 161-284
Cow position: chr21:16099444-16099313 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 162-283
Cow position: chr21:17072724-17072844 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 11

Conread position: 166-283
Cow position: chr21:26828848-26828725 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 171-335
Cow position: chr21:37014297-37014125 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 145

Conread position: 177-280
Cow position: chr21:19136764-19136660 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.