Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rpigcf0_007062.5
        

               Conread position:
               1-276
               

               Cow position:
               chrX:14955838-14955564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               138, 11
               

               Conread position:
               1-283
               

               Cow position:
               chrX:8917323-8917606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 10
               

               Conread position:
               2-219
               

               Cow position:
               chrX:22915109-22914900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               2-234
               

               Cow position:
               chrX:19965476-19965239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               3-205
               

               Cow position:
               chrX:37910374-37910574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 8
               

               Conread position:
               3-215
               

               Cow position:
               chrX:29120974-29121185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               46, 8
               

               Conread position:
               3-216
               

               Cow position:
               chrX:36514966-36514753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               48, 8
               

               Conread position:
               3-283
               

               Cow position:
               chrX:34565209-34565496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               46, 8
               

               Conread position:
               3-283
               

               Cow position:
               chrX:38218638-38218924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               63, 8
               

               Conread position:
               3-290
               

               Cow position:
               chrX:46072892-46072612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               45, 8
               

               Conread position:
               4-281
               

               Cow position:
               chrX:46532573-46532281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               4-283
               

               Cow position:
               chrX:3654536-3654814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               4-283
               

               Cow position:
               chrX:20151778-20152059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 141
               

               Conread position:
               4-283
               

               Cow position:
               chrX:38094593-38094315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               47, 136
               

               Conread position:
               4-283
               

               Cow position:
               chrX:46587748-46588031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 243
               

               Conread position:
               5-231
               

               Cow position:
               chrX:42235598-42235371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               43, 7
               

               Conread position:
               5-281
               

               Cow position:
               chrX:22821980-22822264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               208, 45
               

               Conread position:
               5-283
               

               Cow position:
               chrX:4153105-4152833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               5-283
               

               Cow position:
               chrX:22115387-22115103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               42, 53
               

               Conread position:
               5-283
               

               Cow position:
               chrX:27705517-27705798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               44, 8
               

               Conread position:
               6-283
               

               Cow position:
               chrX:40336829-40337122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               7-281
               

               Cow position:
               chrX:16762702-16762977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               7-288
               

               Cow position:
               chrX:18485729-18486019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 54
               

               Conread position:
               7-306
               

               Cow position:
               chrX:842091-842389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               35, 51
               

               Conread position:
               8-187
               

               Cow position:
               chrX:2467818-2467994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               73, 34
               

               Conread position:
               8-194
               

               Cow position:
               chrX:46793953-46793773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               8-198
               

               Cow position:
               chrX:11856361-11856551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               8-200
               

               Cow position:
               chrX:48195105-48194913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               8-212
               

               Cow position:
               chrX:42171364-42171162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               34, 163
               

               Conread position:
               8-214
               

               Cow position:
               chrX:10412053-10411847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               8-219
               

               Cow position:
               chrX:23514083-23513879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               8-222
               

               Cow position:
               chrX:3130507-3130716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               8-227
               

               Cow position:
               chrX:8797185-8797399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 127
               

               Conread position:
               8-229
               

               Cow position:
               chrX:5900401-5900612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               8-231
               

               Cow position:
               chrX:5872253-5872471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               8-231
               

               Cow position:
               chrX:22387310-22387096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 64
               

               Conread position:
               8-231
               

               Cow position:
               chrX:23562567-23562786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               8-231
               

               Cow position:
               chrX:45884043-45883817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               37, 24
               

               Conread position:
               8-232
               

               Cow position:
               chrX:46433423-46433647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               8-233
               

               Cow position:
               chrX:28878237-28878018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               40, 63
               

               Conread position:
               8-233
               

               Cow position:
               chrX:38728670-38728890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               42, 78
               

               Conread position:
               8-233
               

               Cow position:
               chrX:40809621-40809849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-234
               

               Cow position:
               chrX:7710606-7710381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               39, 64
               

               Conread position:
               8-234
               

               Cow position:
               chrX:13382262-13382482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               8-234
               

               Cow position:
               chrX:14599465-14599689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               41, 47
               

               Conread position:
               8-234
               

               Cow position:
               chrX:16348636-16348416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               41, 75
               

               Conread position:
               8-234
               

               Cow position:
               chrX:17888486-17888266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               8-234
               

               Cow position:
               chrX:27394088-27393869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               8-234
               

               Cow position:
               chrX:29680328-29680103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               41, 68
               

               Conread position:
               8-234
               

               Cow position:
               chrX:32820962-32821185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               41, 62
               

               Conread position:
               8-234
               

               Cow position:
               chrX:39220012-39220236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               8-234
               

               Cow position:
               chrX:43730286-43730067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               8-240
               

               Cow position:
               chrX:6265667-6265436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               34, 96
               

               Conread position:
               8-241
               

               Cow position:
               chrX:11717856-11717619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               8-243
               

               Cow position:
               chrX:34502854-34503088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               41, 68
               

               Conread position:
               8-246
               

               Cow position:
               chrX:23113210-23113457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               41, 17
               

               Conread position:
               8-253
               

               Cow position:
               chrX:11614632-11614866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 65
               

               Conread position:
               8-260
               

               Cow position:
               chrX:21327838-21328097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               8-265
               

               Cow position:
               chrX:34662915-34662653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 53
               

               Conread position:
               8-266
               

               Cow position:
               chrX:40283058-40283317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               42, 65
               

               Conread position:
               8-270
               

               Cow position:
               chrX:41674042-41674298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               43, 53
               

               Conread position:
               8-277
               

               Cow position:
               chrX:38208611-38208349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               42, 50
               

               Conread position:
               8-277
               

               Cow position:
               chrX:48010533-48010810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-280
               

               Cow position:
               chrX:26492939-26493215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 64
               

               Conread position:
               8-280
               

               Cow position:
               chrX:41068653-41068928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               8-281
               

               Cow position:
               chrX:9425808-9425553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               205, 42
               

               Conread position:
               8-281
               

               Cow position:
               chrX:20882005-20881752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               8-281
               

               Cow position:
               chrX:21642546-21642272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               8-281
               

               Cow position:
               chrX:27174928-27175209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               32, 126
               

               Conread position:
               8-281
               

               Cow position:
               chrX:27228060-27228338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 67
               

               Conread position:
               8-281
               

               Cow position:
               chrX:29601898-29601620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               8-281
               

               Cow position:
               chrX:31294631-31294360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               41, 65
               

               Conread position:
               8-282
               

               Cow position:
               chrX:31729374-31729647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               8-283
               

               Cow position:
               chrX:151837-152116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               213, 67
               

               Conread position:
               8-283
               

               Cow position:
               chrX:3579878-3580156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               211, 52
               

               Conread position:
               8-283
               

               Cow position:
               chrX:4269129-4268859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               38, 50
               

               Conread position:
               8-283
               

               Cow position:
               chrX:5118570-5118287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 49
               

               Conread position:
               8-283
               

               Cow position:
               chrX:6559513-6559245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               41, 55
               

               Conread position:
               8-283
               

               Cow position:
               chrX:8925633-8925891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               8-283
               

               Cow position:
               chrX:10831561-10831270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               43, 174
               

               Conread position:
               8-283
               

               Cow position:
               chrX:12095841-12095560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               41, 51
               

               Conread position:
               8-283
               

               Cow position:
               chrX:20339957-20339684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               215, 42
               

               Conread position:
               8-283
               

               Cow position:
               chrX:24365893-24365611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               41, 166
               

               Conread position:
               8-283
               

               Cow position:
               chrX:25815974-25815688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               8-283
               

               Cow position:
               chrX:27509091-27508813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               8-283
               

               Cow position:
               chrX:30962941-30962664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 53
               

               Conread position:
               8-283
               

               Cow position:
               chrX:31489452-31489732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               227, 42
               

               Conread position:
               8-283
               

               Cow position:
               chrX:33000835-33001109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 68
               

               Conread position:
               8-283
               

               Cow position:
               chrX:33654909-33654632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 58
               

               Conread position:
               8-283
               

               Cow position:
               chrX:34315454-34315738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               70, 28
               

               Conread position:
               8-283
               

               Cow position:
               chrX:34441519-34441242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               8-283
               

               Cow position:
               chrX:34554658-34554935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               41, 71
               

               Conread position:
               8-283
               

               Cow position:
               chrX:35885795-35885521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               8-283
               

               Cow position:
               chrX:36356047-36356315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               8-283
               

               Cow position:
               chrX:36866103-36866384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               44, 53
               

               Conread position:
               8-283
               

               Cow position:
               chrX:38549379-38549657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               41, 64
               

               Conread position:
               8-283
               

               Cow position:
               chrX:40826819-40826539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 55
               

               Conread position:
               8-283
               

               Cow position:
               chrX:41238419-41238151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               41, 17
               

               Conread position:
               8-283
               

               Cow position:
               chrX:41879000-41878726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               40, 130
               

               Conread position:
               8-283
               

               Cow position:
               chrX:42247254-42246970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               8-283
               

               Cow position:
               chrX:44054739-44055014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               41, 51
               

               Conread position:
               8-283
               

               Cow position:
               chrX:44396950-44397222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 65
               

               Conread position:
               8-283
               

               Cow position:
               chrX:45875325-45875601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               41, 68
               

               Conread position:
               8-284
               

               Cow position:
               chrX:13868635-13868916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               41, 70
               

               Conread position:
               8-284
               

               Cow position:
               chrX:22283764-22284051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               67, 42
               

               Conread position:
               8-284
               

               Cow position:
               chrX:32330092-32330383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               8-284
               

               Cow position:
               chrX:48071093-48071374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               35, 50
               

               Conread position:
               8-288
               

               Cow position:
               chrX:1499599-1499870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               8-288
               

               Cow position:
               chrX:38964036-38964313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 223
               

               Conread position:
               8-289
               

               Cow position:
               chrX:8731019-8731311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               41, 137
               

               Conread position:
               8-290
               

               Cow position:
               chrX:30133388-30133106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               41, 53
               

               Conread position:
               8-290
               

               Cow position:
               chrX:31436410-31436687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               8-325
               

               Cow position:
               chrX:15007217-15006902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               41, 68
               

               Conread position:
               9-190
               

               Cow position:
               chrX:47967534-47967720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               9-200
               

               Cow position:
               chrX:47300970-47300781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               9-200
               

               Cow position:
               chrX:47302944-47302755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               9-227
               

               Cow position:
               chrX:5679632-5679422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               9-233
               

               Cow position:
               chrX:45113552-45113776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               38, 73
               

               Conread position:
               9-235
               

               Cow position:
               chrX:20697671-20697453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               9-270
               

               Cow position:
               chrX:34222647-34222911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               41, 162
               

               Conread position:
               9-277
               

               Cow position:
               chrX:33800256-33800526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               37, 67
               

               Conread position:
               9-277
               

               Cow position:
               chrX:47484332-47484057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 49
               

               Conread position:
               9-281
               

               Cow position:
               chrX:42855388-42855672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               9-281
               

               Cow position:
               chrX:47873403-47873127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               37, 52
               

               Conread position:
               9-282
               

               Cow position:
               chrX:48003780-48004056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               9-283
               

               Cow position:
               chrX:13121863-13122155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               9-283
               

               Cow position:
               chrX:36975885-36976163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               9-283
               

               Cow position:
               chrX:40680544-40680826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               9-283
               

               Cow position:
               chrX:43779913-43779654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               40, 79
               

               Conread position:
               9-284
               

               Cow position:
               chrX:47344227-47344511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               9-284
               

               Cow position:
               chrX:48262542-48262817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 49
               

               Conread position:
               10-194
               

               Cow position:
               chrX:44954280-44954465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 69
               

               Conread position:
               10-200
               

               Cow position:
               chrX:46722800-46722612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               10-207
               

               Cow position:
               chrX:7571837-7572037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 71
               

               Conread position:
               10-217
               

               Cow position:
               chrX:9365741-9365536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               39, 45
               

               Conread position:
               10-227
               

               Cow position:
               chrX:42873328-42873535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               162, 38
               

               Conread position:
               10-231
               

               Cow position:
               chrX:15820531-15820748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 60
               

               Conread position:
               10-234
               

               Cow position:
               chrX:616328-616103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               10-234
               

               Cow position:
               chrX:36067947-36068176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               10-245
               

               Cow position:
               chrX:33205030-33204803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               10-263
               

               Cow position:
               chrX:4515618-4515879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               39, 66
               

               Conread position:
               10-265
               

               Cow position:
               chrX:6413982-6414231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               10-280
               

               Cow position:
               chrX:46771025-46770754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               175, 40
               

               Conread position:
               10-282
               

               Cow position:
               chrX:31250321-31250600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               32, 51
               

               Conread position:
               10-282
               

               Cow position:
               chrX:32420154-32420421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               225, 40
               

               Conread position:
               10-283
               

               Cow position:
               chrX:1616110-1615847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               41, 124
               

               Conread position:
               10-283
               

               Cow position:
               chrX:4632915-4632643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 14
               

               Conread position:
               10-283
               

               Cow position:
               chrX:5063187-5063447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               10-283
               

               Cow position:
               chrX:7351235-7351512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 66
               

               Conread position:
               10-283
               

               Cow position:
               chrX:11633614-11633893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               10-283
               

               Cow position:
               chrX:12309451-12309174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               219, 48
               

               Conread position:
               10-283
               

               Cow position:
               chrX:15147253-15146988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               38, 49
               

               Conread position:
               10-283
               

               Cow position:
               chrX:18204527-18204255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               10-283
               

               Cow position:
               chrX:25035445-25035170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               10-283
               

               Cow position:
               chrX:37781177-37780901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               10-283
               

               Cow position:
               chrX:38321453-38321172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               10-283
               

               Cow position:
               chrX:41027090-41027371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               10-283
               

               Cow position:
               chrX:43115086-43115360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               217, 41
               

               Conread position:
               10-283
               

               Cow position:
               chrX:46291072-46291352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 41
               

               Conread position:
               10-298
               

               Cow position:
               chrX:31515103-31515396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               49, 281
               

               Conread position:
               10-302
               

               Cow position:
               chrX:26881634-26881329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               11-200
               

               Cow position:
               chrX:45403892-45403703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 47
               

               Conread position:
               11-200
               

               Cow position:
               chrX:47238028-47238215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               36, 47
               

               Conread position:
               11-200
               

               Cow position:
               chrX:48571057-48570866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               31, 188
               

               Conread position:
               11-200
               

               Cow position:
               chrX:48652785-48652599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               11-227
               

               Cow position:
               chrX:31311964-31312179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 20
               

               Conread position:
               11-253
               

               Cow position:
               chrX:44657026-44656781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               39, 94
               

               Conread position:
               11-270
               

               Cow position:
               chrX:7721924-7722175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 128
               

               Conread position:
               12-229
               

               Cow position:
               chrX:29289515-29289730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               12-231
               

               Cow position:
               chrX:33639909-33640129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               37, 87
               

               Conread position:
               12-234
               

               Cow position:
               chrX:34401934-34402163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               35, 82
               

               Conread position:
               12-283
               

               Cow position:
               chrX:34313965-34314232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               35, 46
               

               Conread position:
               12-284
               

               Cow position:
               chrX:14884022-14883745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               13-215
               

               Cow position:
               chrX:48044576-48044378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               13-233
               

               Cow position:
               chrX:9416756-9416528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 99
               

               Conread position:
               13-252
               

               Cow position:
               chrX:32170950-32170712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               13-283
               

               Cow position:
               chrX:296332-296603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               13-283
               

               Cow position:
               chrX:25036924-25037203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               37, 65
               

               Conread position:
               14-229
               

               Cow position:
               chrX:6690318-6690110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               14-231
               

               Cow position:
               chrX:33493715-33493927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               33, 125
               

               Conread position:
               14-231
               

               Cow position:
               chrX:41884476-41884258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               14-234
               

               Cow position:
               chrX:17725912-17726133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               194, 0
               

               Conread position:
               14-241
               

               Cow position:
               chrX:6278562-6278334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               14-262
               

               Cow position:
               chrX:31252356-31252598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               14-263
               

               Cow position:
               chrX:34532459-34532709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               184, 37
               

               Conread position:
               14-271
               

               Cow position:
               chrX:13647847-13647585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 43
               

               Conread position:
               14-280
               

               Cow position:
               chrX:34411780-34412056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               14-283
               

               Cow position:
               chrX:20584262-20584523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               33, 200
               

               Conread position:
               14-283
               

               Cow position:
               chrX:34376884-34377150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 81
               

               Conread position:
               14-283
               

               Cow position:
               chrX:34792370-34792112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               14-283
               

               Cow position:
               chrX:40035505-40035228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               14-284
               

               Cow position:
               chrX:9252224-9251951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               14-289
               

               Cow position:
               chrX:44703134-44702848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               14-293
               

               Cow position:
               chrX:29050185-29050463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               16-284
               

               Cow position:
               chrX:46546938-46546661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               17-234
               

               Cow position:
               chrX:31627040-31626824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               31, 127
               

               Conread position:
               18-200
               

               Cow position:
               chrX:47114162-47113984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               18-226
               

               Cow position:
               chrX:48655813-48655608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               19-234
               

               Cow position:
               chrX:23091811-23092026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               19-260
               

               Cow position:
               chrX:7178841-7179079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               208, 54
               

               Conread position:
               19-270
               

               Cow position:
               chrX:14275803-14275550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               19-279
               

               Cow position:
               chrX:27511370-27511628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               19-281
               

               Cow position:
               chrX:1360029-1360291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               30, 42
               

               Conread position:
               19-283
               

               Cow position:
               chrX:4279174-4278908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               23, 48
               

               Conread position:
               19-283
               

               Cow position:
               chrX:7648458-7648201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               19-283
               

               Cow position:
               chrX:8869461-8869193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               19-288
               

               Cow position:
               chrX:39352723-39352988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               20-222
               

               Cow position:
               chrX:878439-878235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               20-283
               

               Cow position:
               chrX:4768685-4768939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               22-283
               

               Cow position:
               chrX:36367996-36367723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               26-216
               

               Cow position:
               chrX:11073242-11073052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               23, 18
               

               Conread position:
               26-219
               

               Cow position:
               chrX:4043910-4043725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 47
               

               Conread position:
               26-281
               

               Cow position:
               chrX:31948987-31948725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               26-282
               

               Cow position:
               chrX:35542845-35543094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               26-283
               

               Cow position:
               chrX:6407494-6407755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               26-283
               

               Cow position:
               chrX:10516200-10516465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               26-283
               

               Cow position:
               chrX:14973790-14973546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               23, 47
               

               Conread position:
               26-283
               

               Cow position:
               chrX:17231683-17231948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               26-283
               

               Cow position:
               chrX:20887695-20887438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               23, 91
               

               Conread position:
               26-283
               

               Cow position:
               chrX:27261138-27261401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 253
               

               Conread position:
               26-283
               

               Cow position:
               chrX:34238665-34238934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               26-283
               

               Cow position:
               chrX:40685381-40685118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               26-283
               

               Cow position:
               chrX:41871015-41871268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               26-283
               

               Cow position:
               chrX:44339374-44339110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               22, 110
               

               Conread position:
               26-283
               

               Cow position:
               chrX:45110606-45110862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               26-290
               

               Cow position:
               chrX:9201500-9201761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               21, 47
               

               Conread position:
               27-216
               

               Cow position:
               chrX:19943286-19943097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 132
               

               Conread position:
               27-279
               

               Cow position:
               chrX:22393035-22392781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               23, 31
               

               Conread position:
               28-269
               

               Cow position:
               chrX:5919442-5919689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               28-269
               

               Cow position:
               chrX:35985770-35986017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               28-280
               

               Cow position:
               chrX:44192497-44192234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               28-283
               

               Cow position:
               chrX:4109142-4109396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               28-283
               

               Cow position:
               chrX:34505099-34504842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               31-217
               

               Cow position:
               chrX:46429867-46429679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               31-233
               

               Cow position:
               chrX:6260193-6259992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               31-283
               

               Cow position:
               chrX:12290677-12290929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               31-283
               

               Cow position:
               chrX:12979880-12979624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               31-283
               

               Cow position:
               chrX:27306407-27306650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 189
               

               Conread position:
               31-283
               

               Cow position:
               chrX:33855265-33855015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               31-283
               

               Cow position:
               chrX:34543735-34543997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               31-283
               

               Cow position:
               chrX:41192655-41192900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               31-283
               

               Cow position:
               chrX:42492562-42492310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               31-290
               

               Cow position:
               chrX:36392233-36391970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               32-281
               

               Cow position:
               chrX:34540635-34540892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               32-283
               

               Cow position:
               chrX:35822298-35822542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 44
               

               Conread position:
               34-200
               

               Cow position:
               chrX:44063664-44063502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               73, 26
               

               Conread position:
               34-200
               

               Cow position:
               chrX:47300800-47300637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               34-242
               

               Cow position:
               chrX:29553243-29553449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               34-262
               

               Cow position:
               chrX:48652474-48652248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               34-274
               

               Cow position:
               chrX:44660629-44660386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               161, 23
               

               Conread position:
               34-277
               

               Cow position:
               chrX:43152197-43151950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 11
               

               Conread position:
               34-281
               

               Cow position:
               chrX:13913025-13913284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               34-281
               

               Cow position:
               chrX:44202088-44201836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               193, 41
               

               Conread position:
               34-281
               

               Cow position:
               chrX:48473866-48474118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               183, 28
               

               Conread position:
               34-282
               

               Cow position:
               chrX:47358266-47358524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 26
               

               Conread position:
               34-284
               

               Cow position:
               chrX:44090881-44091135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               193, 26
               

               Conread position:
               34-284
               

               Cow position:
               chrX:44859904-44859650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               193, 26
               

               Conread position:
               34-284
               

               Cow position:
               chrX:48198688-48198436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               194, 26
               

               Conread position:
               34-288
               

               Cow position:
               chrX:46793787-46793534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               182, 26
               

               Conread position:
               34-291
               

               Cow position:
               chrX:48532273-48532533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               200, 26
               

               Conread position:
               35-281
               

               Cow position:
               chrX:44796342-44796593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               138, 25
               

               Conread position:
               35-281
               

               Cow position:
               chrX:44837224-44837474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               169, 25
               

               Conread position:
               35-281
               

               Cow position:
               chrX:46722630-46722380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               192, 25
               

               Conread position:
               35-284
               

               Cow position:
               chrX:45254623-45254370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               193, 25
               

               Conread position:
               35-284
               

               Cow position:
               chrX:48574606-48574859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               192, 25
               

               Conread position:
               35-293
               

               Cow position:
               chrX:44591102-44590840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               188, 25
               

               Conread position:
               36-283
               

               Cow position:
               chrX:43150381-43150642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               41, 175
               

               Conread position:
               38-231
               

               Cow position:
               chrX:753119-753310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               39-290
               

               Cow position:
               chrX:48558710-48558964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               40-234
               

               Cow position:
               chrX:169580-169389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               40-268
               

               Cow position:
               chrX:23188812-23188593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 32
               

               Conread position:
               40-281
               

               Cow position:
               chrX:28940210-28940453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               31, 41
               

               Conread position:
               40-283
               

               Cow position:
               chrX:4399088-4399329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               40-283
               

               Cow position:
               chrX:4645947-4645703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               193, 35
               

               Conread position:
               40-283
               

               Cow position:
               chrX:17956660-17956900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               192, 32
               

               Conread position:
               40-283
               

               Cow position:
               chrX:24331744-24331988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               196, 22
               

               Conread position:
               40-283
               

               Cow position:
               chrX:41123027-41123256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               40-283
               

               Cow position:
               chrX:42893882-42894133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               41-298
               

               Cow position:
               chrX:6599818-6599550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               42-283
               

               Cow position:
               chrX:30840506-30840752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               32, 38
               

               Conread position:
               45-218
               

               Cow position:
               chrX:10305378-10305210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               45-234
               

               Cow position:
               chrX:23498708-23498523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               45-234
               

               Cow position:
               chrX:37129237-37129426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               45-283
               

               Cow position:
               chrX:37489693-37489940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               175, 27
               

               Conread position:
               46-280
               

               Cow position:
               chrX:45543292-45543543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               165, 14
               

               Conread position:
               47-253
               

               Cow position:
               chrX:32318275-32318482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               48-200
               

               Cow position:
               chrX:48532143-48532292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               48-231
               

               Cow position:
               chrX:20743575-20743757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               48-233
               

               Cow position:
               chrX:47514662-47514479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               169, 12
               

               Conread position:
               48-283
               

               Cow position:
               chrX:1466134-1466374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               48-283
               

               Cow position:
               chrX:19394525-19394766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               151, 9
               

               Conread position:
               48-283
               

               Cow position:
               chrX:22074767-22075006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               51, 9
               

               Conread position:
               48-283
               

               Cow position:
               chrX:38642222-38642453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               48-288
               

               Cow position:
               chrX:11326127-11325892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               48-307
               

               Cow position:
               chrX:44063507-44063248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               201, 12
               

               Conread position:
               49-200
               

               Cow position:
               chrX:46788310-46788162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               49-281
               

               Cow position:
               chrX:45403572-45403336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               160, 11
               

               Conread position:
               49-283
               

               Cow position:
               chrX:31442857-31442628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               49-283
               

               Cow position:
               chrX:35268839-35269067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               197, 28
               

               Conread position:
               49-283
               

               Cow position:
               chrX:35431270-35431030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               74, 11
               

               Conread position:
               50-244
               

               Cow position:
               chrX:43116699-43116893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               190, 27
               

               Conread position:
               51-279
               

               Cow position:
               chrX:47061370-47061594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               51-281
               

               Cow position:
               chrX:45430046-45429821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               51-283
               

               Cow position:
               chrX:1088167-1087937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               51-283
               

               Cow position:
               chrX:9651050-9650816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 6
               

               Conread position:
               51-283
               

               Cow position:
               chrX:19469530-19469304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               14, 6
               

               Conread position:
               51-283
               

               Cow position:
               chrX:24749063-24749298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               162, 9
               

               Conread position:
               52-281
               

               Cow position:
               chrX:41526546-41526325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               183, 5
               

               Conread position:
               52-283
               

               Cow position:
               chrX:4289416-4289645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 172
               

               Conread position:
               54-227
               

               Cow position:
               chrX:25411886-25412055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               54-262
               

               Cow position:
               chrX:17966322-17966523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               55-283
               

               Cow position:
               chrX:35275965-35276197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               168, 22
               

               Conread position:
               55-283
               

               Cow position:
               chrX:42836164-42836392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               163, 20
               

               Conread position:
               55-284
               

               Cow position:
               chrX:10252220-10251990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 84
               

               Conread position:
               56-283
               

               Cow position:
               chrX:32910083-32910308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               172, 113
               

               Conread position:
               57-261
               

               Cow position:
               chrX:40532063-40531858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               57-282
               

               Cow position:
               chrX:45383065-45382851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               57-283
               

               Cow position:
               chrX:37072372-37072597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               167, 15
               

               Conread position:
               57-283
               

               Cow position:
               chrX:38560537-38560761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               20, 164
               

               Conread position:
               60-268
               

               Cow position:
               chrX:24633667-24633890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               60-283
               

               Cow position:
               chrX:42282561-42282788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               161, 28
               

               Conread position:
               60-283
               

               Cow position:
               chrX:42450031-42449802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               60-284
               

               Cow position:
               chrX:38853180-38853423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               60-284
               

               Cow position:
               chrX:42432528-42432302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               61-283
               

               Cow position:
               chrX:37955831-37956056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               166, 217
               

               Conread position:
               61-284
               

               Cow position:
               chrX:27145585-27145811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               62-277
               

               Cow position:
               chrX:11844256-11844035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 26
               

               Conread position:
               62-277
               

               Cow position:
               chrX:43008594-43008815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               62-283
               

               Cow position:
               chrX:3806670-3806889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               169, 10
               

               Conread position:
               63-270
               

               Cow position:
               chrX:20678152-20677949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               155, 59
               

               Conread position:
               63-275
               

               Cow position:
               chrX:1055395-1055178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               63-280
               

               Cow position:
               chrX:32574301-32574524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               63-283
               

               Cow position:
               chrX:26843281-26843055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               161, 9
               

               Conread position:
               64-234
               

               Cow position:
               chrX:29733603-29733434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               161, 8
               

               Conread position:
               64-283
               

               Cow position:
               chrX:16836299-16836083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               64-283
               

               Cow position:
               chrX:24170742-24170514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               158, 109
               

               Conread position:
               65-273
               

               Cow position:
               chrX:11859548-11859335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               149, 12
               

               Conread position:
               66-283
               

               Cow position:
               chrX:4559729-4559945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               157, 13
               

               Conread position:
               66-283
               

               Cow position:
               chrX:44040167-44040388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               67-243
               

               Cow position:
               chrX:37836575-37836743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 70
               

               Conread position:
               67-283
               

               Cow position:
               chrX:27431930-27431713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               6, 207
               

               Conread position:
               67-283
               

               Cow position:
               chrX:38967877-38968106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               17, 90
               

               Conread position:
               67-283
               

               Cow position:
               chrX:42927835-42927619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 176
               

               Conread position:
               68-283
               

               Cow position:
               chrX:12972672-12972889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               37, 156
               

               Conread position:
               68-283
               

               Cow position:
               chrX:26979799-26979580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 93
               

               Conread position:
               68-288
               

               Cow position:
               chrX:41941614-41941839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               164, 178
               

               Conread position:
               69-229
               

               Cow position:
               chrX:4616020-4615859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               10, 128
               

               Conread position:
               69-281
               

               Cow position:
               chrX:36109624-36109405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               69-283
               

               Cow position:
               chrX:4466959-4467162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               69-283
               

               Cow position:
               chrX:30672404-30672173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               69-283
               

               Cow position:
               chrX:45699977-45699769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               70-283
               

               Cow position:
               chrX:29229991-29230218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               71-284
               

               Cow position:
               chrX:17292949-17293168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               72-281
               

               Cow position:
               chrX:11763006-11762802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               72-283
               

               Cow position:
               chrX:1175987-1175779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               151, 88
               

               Conread position:
               72-283
               

               Cow position:
               chrX:4403306-4403529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               72-284
               

               Cow position:
               chrX:30337958-30337742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               72-297
               

               Cow position:
               chrX:35658795-35659017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               149, 21
               

               Conread position:
               73-234
               

               Cow position:
               chrX:23785642-23785803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 93
               

               Conread position:
               73-253
               

               Cow position:
               chrX:16575108-16575294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               73-283
               

               Cow position:
               chrX:42381116-42380901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               148, 202
               

               Conread position:
               73-290
               

               Cow position:
               chrX:27514854-27515077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               73-291
               

               Cow position:
               chrX:45139937-45139712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               8, 16
               

               Conread position:
               74-266
               

               Cow position:
               chrX:39180236-39180039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               149, 106
               

               Conread position:
               74-283
               

               Cow position:
               chrX:13923861-13924072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               74-283
               

               Cow position:
               chrX:16984638-16984846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               74-283
               

               Cow position:
               chrX:27668961-27668751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               150, 183
               

               Conread position:
               74-283
               

               Cow position:
               chrX:47345323-47345541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               74-293
               

               Cow position:
               chrX:27446682-27446904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               75-231
               

               Cow position:
               chrX:24343576-24343417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               75-265
               

               Cow position:
               chrX:17704388-17704581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               155, 5
               

               Conread position:
               75-282
               

               Cow position:
               chrX:18111376-18111589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               75-283
               

               Cow position:
               chrX:20957235-20957450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               75-283
               

               Cow position:
               chrX:25207856-25207650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               144, 12
               

               Conread position:
               75-283
               

               Cow position:
               chrX:29544879-29544675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               76-222
               

               Cow position:
               chrX:29501882-29501739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               77-233
               

               Cow position:
               chrX:31829461-31829305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               77-268
               

               Cow position:
               chrX:26205448-26205258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               77-283
               

               Cow position:
               chrX:6544257-6544456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               77-283
               

               Cow position:
               chrX:11653764-11653978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               77-283
               

               Cow position:
               chrX:21986290-21986090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               77-283
               

               Cow position:
               chrX:23335972-23335764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               77-283
               

               Cow position:
               chrX:27075051-27074840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               77-283
               

               Cow position:
               chrX:28846893-28846681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               119, 76
               

               Conread position:
               77-283
               

               Cow position:
               chrX:29478724-29478933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               143, 75
               

               Conread position:
               77-283
               

               Cow position:
               chrX:34420734-34420947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               77-283
               

               Cow position:
               chrX:34837063-34836861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               77-288
               

               Cow position:
               chrX:39290359-39290571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               153, 129
               

               Conread position:
               78-283
               

               Cow position:
               chrX:2935958-2936164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               78-283
               

               Cow position:
               chrX:4328182-4327971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               145, 124
               

               Conread position:
               78-283
               

               Cow position:
               chrX:11656082-11656289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               78-283
               

               Cow position:
               chrX:36283339-36283551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               35, 120
               

               Conread position:
               79-283
               

               Cow position:
               chrX:32208820-32208616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               145, 89
               

               Conread position:
               80-282
               

               Cow position:
               chrX:25049279-25049071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               80-290
               

               Cow position:
               chrX:17524381-17524165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               80-317
               

               Cow position:
               chrX:13177476-13177240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               7, 193
               

               Conread position:
               82-280
               

               Cow position:
               chrX:19761759-19761957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               82-284
               

               Cow position:
               chrX:1122538-1122335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               87-283
               

               Cow position:
               chrX:35285183-35285385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               87-329
               

               Cow position:
               chrX:19018821-19018571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               140, 206
               

               Conread position:
               88-279
               

               Cow position:
               chrX:35392283-35392098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               88-281
               

               Cow position:
               chrX:17794992-17795189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               88-283
               

               Cow position:
               chrX:19356480-19356675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 64
               

               Conread position:
               90-229
               

               Cow position:
               chrX:47342129-47342267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               90-268
               

               Cow position:
               chrX:1719128-1719304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               90-283
               

               Cow position:
               chrX:8759637-8759834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               23, 75
               

               Conread position:
               91-234
               

               Cow position:
               chrX:36313992-36313849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               91-283
               

               Cow position:
               chrX:3494808-3494610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               91-283
               

               Cow position:
               chrX:15545896-15546092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               126, 180
               

               Conread position:
               91-283
               

               Cow position:
               chrX:29467764-29467571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               93-283
               

               Cow position:
               chrX:31479987-31480177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               114, 58
               

               Conread position:
               94-283
               

               Cow position:
               chrX:20345470-20345662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               140, 30
               

               Conread position:
               97-283
               

               Cow position:
               chrX:28067870-28068062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               97-283
               

               Cow position:
               chrX:41454934-41454742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               97-283
               

               Cow position:
               chrX:41810148-41809964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               100-283
               

               Cow position:
               chrX:34398761-34398572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               100-283
               

               Cow position:
               chrX:35681589-35681778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               101-283
               

               Cow position:
               chrX:41453326-41453510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               101-332
               

               Cow position:
               chrX:23471842-23471604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               102-281
               

               Cow position:
               chrX:41790405-41790218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               103-270
               

               Cow position:
               chrX:19717547-19717712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               103-283
               

               Cow position:
               chrX:16763901-16763719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               105-283
               

               Cow position:
               chrX:5026284-5026462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               163, 116
               

               Conread position:
               105-283
               

               Cow position:
               chrX:20583694-20583871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               122, 167
               

               Conread position:
               105-283
               

               Cow position:
               chrX:23359083-23358906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               115, 33
               

               Conread position:
               105-283
               

               Cow position:
               chrX:32866903-32867081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               105-290
               

               Cow position:
               chrX:2314591-2314400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               105-318
               

               Cow position:
               chrX:47855009-47855220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               122, 64
               

               Conread position:
               106-234
               

               Cow position:
               chrX:31373565-31373693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               106-267
               

               Cow position:
               chrX:45950859-45950698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               122, 33
               

               Conread position:
               106-283
               

               Cow position:
               chrX:46909844-46910019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               107-281
               

               Cow position:
               chrX:11454216-11454383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               135, 64
               

               Conread position:
               107-283
               

               Cow position:
               chrX:2551121-2551288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               44, 108
               

               Conread position:
               107-283
               

               Cow position:
               chrX:4091954-4092133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               129, 168
               

               Conread position:
               107-283
               

               Cow position:
               chrX:8642078-8642256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               114, 9
               

               Conread position:
               107-283
               

               Cow position:
               chrX:37749953-37749781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               32, 37
               

               Conread position:
               110-284
               

               Cow position:
               chrX:18439029-18439209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               112-283
               

               Cow position:
               chrX:1960390-1960214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               112-283
               

               Cow position:
               chrX:17498357-17498534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               112-283
               

               Cow position:
               chrX:27270410-27270580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 150
               

               Conread position:
               112-283
               

               Cow position:
               chrX:35383001-35382831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               112-283
               

               Cow position:
               chrX:36722770-36722602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               112-283
               

               Cow position:
               chrX:48822307-48822131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               112-294
               

               Cow position:
               chrX:44995533-44995722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               113-283
               

               Cow position:
               chrX:30958762-30958939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               46, 167
               

               Conread position:
               114-283
               

               Cow position:
               chrX:16556180-16556012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               114-283
               

               Cow position:
               chrX:31986537-31986361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               115-283
               

               Cow position:
               chrX:44123293-44123460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               116-281
               

               Cow position:
               chrX:30824028-30824194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               117-283
               

               Cow position:
               chrX:27442499-27442327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               118-283
               

               Cow position:
               chrX:42086871-42087037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               105, 14
               

               Conread position:
               119-283
               

               Cow position:
               chrX:31983543-31983367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               119-283
               

               Cow position:
               chrX:41858840-41858673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               120-297
               

               Cow position:
               chrX:42539602-42539770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               121-283
               

               Cow position:
               chrX:41010942-41011101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               122-283
               

               Cow position:
               chrX:15100028-15100189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 134
               

               Conread position:
               124-283
               

               Cow position:
               chrX:8326951-8327116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               124-283
               

               Cow position:
               chrX:13347320-13347480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               100, 46
               

               Conread position:
               124-283
               

               Cow position:
               chrX:32877328-32877168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               90, 150
               

               Conread position:
               124-283
               

               Cow position:
               chrX:35409799-35409963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               112, 55
               

               Conread position:
               124-283
               

               Cow position:
               chrX:42875259-42875420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               124-283
               

               Cow position:
               chrX:46068712-46068552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               106, 97
               

               Conread position:
               124-284
               

               Cow position:
               chrX:42461571-42461415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               124-304
               

               Cow position:
               chrX:41862410-41862584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               89, 146
               

               Conread position:
               125-283
               

               Cow position:
               chrX:41166777-41166618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               128-283
               

               Cow position:
               chrX:34991415-34991572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               129-262
               

               Cow position:
               chrX:40543469-40543338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               129-268
               

               Cow position:
               chrX:4169979-4169838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               94, 74
               

               Conread position:
               129-277
               

               Cow position:
               chrX:46533253-46533099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               129-283
               

               Cow position:
               chrX:27415528-27415377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               129-283
               

               Cow position:
               chrX:37752054-37751900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               96, 110
               

               Conread position:
               129-283
               

               Cow position:
               chrX:37867305-37867465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               129-284
               

               Cow position:
               chrX:25925590-25925444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               130-293
               

               Cow position:
               chrX:11529395-11529559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               131-277
               

               Cow position:
               chrX:5915242-5915396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               133-281
               

               Cow position:
               chrX:6480540-6480386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               134-283
               

               Cow position:
               chrX:37867489-37867644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               139-270
               

               Cow position:
               chrX:26720619-26720489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               139-281
               

               Cow position:
               chrX:10237851-10237704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               84, 72
               

               Conread position:
               139-283
               

               Cow position:
               chrX:12812-12954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               139-283
               

               Cow position:
               chrX:11589305-11589156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               139-283
               

               Cow position:
               chrX:17525805-17525666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               139-283
               

               Cow position:
               chrX:22552917-22552768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 137
               

               Conread position:
               139-283
               

               Cow position:
               chrX:23497629-23497486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               139-283
               

               Cow position:
               chrX:26882018-26881868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               139-283
               

               Cow position:
               chrX:32747794-32747933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               139-283
               

               Cow position:
               chrX:41199286-41199433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               140-269
               

               Cow position:
               chrX:11781514-11781646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               140-278
               

               Cow position:
               chrX:28106910-28107052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               140-281
               

               Cow position:
               chrX:14925335-14925482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               140-283
               

               Cow position:
               chrX:51838-51691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               140-283
               

               Cow position:
               chrX:1101620-1101761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               140-283
               

               Cow position:
               chrX:1938077-1938224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               140-283
               

               Cow position:
               chrX:6640490-6640635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 54
               

               Conread position:
               140-283
               

               Cow position:
               chrX:10278933-10279086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 143
               

               Conread position:
               140-283
               

               Cow position:
               chrX:16801200-16801056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 34
               

               Conread position:
               140-283
               

               Cow position:
               chrX:34270624-34270772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               140-283
               

               Cow position:
               chrX:39642559-39642417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               140-283
               

               Cow position:
               chrX:40556396-40556252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               140-283
               

               Cow position:
               chrX:42760315-42760464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               140-283
               

               Cow position:
               chrX:47100534-47100383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               140-304
               

               Cow position:
               chrX:27170802-27170969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               141-283
               

               Cow position:
               chrX:9451409-9451552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               91, 45
               

               Conread position:
               141-283
               

               Cow position:
               chrX:45759735-45759880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               145-281
               

               Cow position:
               chrX:28850791-28850927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-281
               

               Cow position:
               chrX:48574289-48574145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               145-283
               

               Cow position:
               chrX:33466692-33466833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               80, 131
               

               Conread position:
               145-283
               

               Cow position:
               chrX:41215390-41215534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               147-270
               

               Cow position:
               chrX:39094252-39094132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               147-281
               

               Cow position:
               chrX:3494975-3494841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               147-283
               

               Cow position:
               chrX:11813143-11813285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               147-283
               

               Cow position:
               chrX:19000196-19000338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               147-283
               

               Cow position:
               chrX:33678403-33678259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               150-283
               

               Cow position:
               chrX:35029853-35029724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               151-281
               

               Cow position:
               chrX:31279850-31279718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               152-269
               

               Cow position:
               chrX:231943-231824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               152-283
               

               Cow position:
               chrX:1571514-1571385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               152-283
               

               Cow position:
               chrX:4486949-4486813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               152-283
               

               Cow position:
               chrX:16770139-16770276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               152-283
               

               Cow position:
               chrX:39419639-39419510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               152-283
               

               Cow position:
               chrX:42506874-42506735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               152-284
               

               Cow position:
               chrX:14135753-14135887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               152-284
               

               Cow position:
               chrX:43059176-43059044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               152-292
               

               Cow position:
               chrX:25049026-25048882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               153-283
               

               Cow position:
               chrX:4750256-4750127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 58
               

               Conread position:
               154-279
               

               Cow position:
               chrX:25420408-25420529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               154-283
               

               Cow position:
               chrX:29682034-29681907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               82, 53
               

               Conread position:
               155-283
               

               Cow position:
               chrX:13135476-13135342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               155-283
               

               Cow position:
               chrX:37717800-37717933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               155-290
               

               Cow position:
               chrX:5487861-5487730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               158-283
               

               Cow position:
               chrX:17929082-17929209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               158-283
               

               Cow position:
               chrX:35509598-35509469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               158-290
               

               Cow position:
               chrX:42314811-42314673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               159-303
               

               Cow position:
               chrX:43028314-43028464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               163-283
               

               Cow position:
               chrX:1996366-1996240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               171-283
               

               Cow position:
               chrX:10479843-10479961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               171-283
               

               Cow position:
               chrX:42165520-42165408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               172-283
               

               Cow position:
               chrX:42216536-42216422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               175-284
               

               Cow position:
               chrX:41959852-41959959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               178-283
               

               Cow position:
               chrX:38727037-38726933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-276
Cow position:	chrX:14955838-14955564 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	188
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	138, 11
Conread position:	1-283
Cow position:	chrX:8917323-8917606 (view UCSC Genome Browser custom track)
Alignm length:	290
Alignm identity:	189
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	49, 10
Conread position:	2-219
Cow position:	chrX:22915109-22914900 (view UCSC Genome Browser custom track)
Alignm length:	218
Alignm identity:	156
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	18, 0
Conread position:	2-234
Cow position:	chrX:19965476-19965239 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	160
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	40, 0
Conread position:	3-205
Cow position:	chrX:37910374-37910574 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	140
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	73, 8
Conread position:	3-215
Cow position:	chrX:29120974-29121185 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	146
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	46, 8
Conread position:	3-216
Cow position:	chrX:36514966-36514753 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	153
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	48, 8
Conread position:	3-283
Cow position:	chrX:34565209-34565496 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	200
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	46, 8
Conread position:	3-290
Cow position:	chrX:46072892-46072612 (view UCSC Genome Browser custom track)
Alignm length:	291
Alignm identity:	207
Alignm E-value:	5e-40
Alignm gaps (pig, cow):	45, 8
Conread position:	4-281
Cow position:	chrX:46532573-46532281 (view UCSC Genome Browser custom track)
Alignm length:	293
Alignm identity:	207
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	45, 0
Conread position:	4-283
Cow position:	chrX:3654536-3654814 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	189
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	42, 62
Conread position:	5-231
Cow position:	chrX:42235598-42235371 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	164
Alignm E-value:	7e-33
Alignm gaps (pig, cow):	43, 7
Conread position:	5-281
Cow position:	chrX:22821980-22822264 (view UCSC Genome Browser custom track)
Alignm length:	291
Alignm identity:	196
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	208, 45
Conread position:	5-283
Cow position:	chrX:4153105-4152833 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	197
Alignm E-value:	7e-34
Alignm gaps (pig, cow):	42, 7
Conread position:	6-283
Cow position:	chrX:40336829-40337122 (view UCSC Genome Browser custom track)
Alignm length:	296
Alignm identity:	205
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	43, 12
Conread position:	7-281
Cow position:	chrX:16762702-16762977 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	202
Alignm E-value:	1.96182e-44
Alignm gaps (pig, cow):	39, 17
Conread position:	7-288
Cow position:	chrX:18485729-18486019 (view UCSC Genome Browser custom track)
Alignm length:	295
Alignm identity:	194
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	39, 54
Conread position:	7-306
Cow position:	chrX:842091-842389 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	197
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	35, 51
Conread position:	8-187
Cow position:	chrX:2467818-2467994 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	131
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	73, 34
Conread position:	8-194
Cow position:	chrX:46793953-46793773 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	133
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	31, 0