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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_007632.5
        

               
Conread position:
               
58-408
               

               
Cow position:
               
chr13:15903241-15902905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
108-407
               

               
Cow position:
               
chr13:7663251-7663540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
110-506
               

               
Cow position:
               
chr13:17568926-17569316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 146
               

               
Conread position:
               
111-247
               

               
Cow position:
               
chr13:58743113-58743253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
111-330
               

               
Cow position:
               
chr13:37979005-37979208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
117-424
               

               
Cow position:
               
chr13:56154988-56155286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
124-488
               

               
Cow position:
               
chr13:22075827-22075485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
126-402
               

               
Cow position:
               
chr13:48861938-48862208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
25, 30
               

               
Conread position:
               
126-416
               

               
Cow position:
               
chr13:8555621-8555338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
126-507
               

               
Cow position:
               
chr13:44003877-44003478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
127-438
               

               
Cow position:
               
chr13:43184717-43185030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 42
               

               
Conread position:
               
131-489
               

               
Cow position:
               
chr13:15958775-15958418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 126
               

               
Conread position:
               
134-513
               

               
Cow position:
               
chr13:6849079-6848697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 124
               

               
Conread position:
               
136-499
               

               
Cow position:
               
chr13:46525298-46525642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
137-489
               

               
Cow position:
               
chr13:6861328-6860971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
138-379
               

               
Cow position:
               
chr13:18973293-18973536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
139-494
               

               
Cow position:
               
chr13:48375501-48375824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
140-419
               

               
Cow position:
               
chr13:49520679-49520953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
172, 110
               

               
Conread position:
               
140-499
               

               
Cow position:
               
chr13:16014960-16014591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
140-506
               

               
Cow position:
               
chr13:25817666-25817309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
141-246
               

               
Cow position:
               
chr13:15740207-15740100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
141-248
               

               
Cow position:
               
chr13:22025567-22025674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
141-248
               

               
Cow position:
               
chr13:48372776-48372879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
141-266
               

               
Cow position:
               
chr13:60690584-60690709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 110
               

               
Conread position:
               
141-271
               

               
Cow position:
               
chr13:46458764-46458636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
141-272
               

               
Cow position:
               
chr13:5079082-5079211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
141-285
               

               
Cow position:
               
chr13:24776421-24776284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
141-289
               

               
Cow position:
               
chr13:6759651-6759801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
141-289
               

               
Cow position:
               
chr13:21904808-21904659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
141-290
               

               
Cow position:
               
chr13:25261670-25261817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
141-293
               

               
Cow position:
               
chr13:37516994-37517145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 108
               

               
Conread position:
               
141-297
               

               
Cow position:
               
chr13:1339152-1338989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 116
               

               
Conread position:
               
141-297
               

               
Cow position:
               
chr13:9884906-9884755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
141-298
               

               
Cow position:
               
chr13:13265949-13265793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
122, 90
               

               
Conread position:
               
141-299
               

               
Cow position:
               
chr13:36346113-36345957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
141-306
               

               
Cow position:
               
chr13:28652941-28652780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr13:5752282-5752450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
46, 111
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr13:6975652-6975817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
126, 9
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr13:20041820-20041992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr13:20853736-20853909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
141-308
               

               
Cow position:
               
chr13:3003585-3003406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
141-315
               

               
Cow position:
               
chr13:14544260-14544086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
75, 110
               

               
Conread position:
               
141-315
               

               
Cow position:
               
chr13:52199228-52199056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
141-318
               

               
Cow position:
               
chr13:54093886-54093712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
141-322
               

               
Cow position:
               
chr13:563001-563178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
141-324
               

               
Cow position:
               
chr13:11253712-11253530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 118
               

               
Conread position:
               
141-325
               

               
Cow position:
               
chr13:47313061-47312876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 77
               

               
Conread position:
               
141-326
               

               
Cow position:
               
chr13:33517782-33517966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
141-326
               

               
Cow position:
               
chr13:53070028-53070206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr13:19178418-19178229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 111
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr13:21039456-21039646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
141-329
               

               
Cow position:
               
chr13:61162791-61162601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
141-330
               

               
Cow position:
               
chr13:1779975-1779784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
141-330
               

               
Cow position:
               
chr13:14870671-14870487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
141-330
               

               
Cow position:
               
chr13:20128807-20128621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
60, 110
               

               
Conread position:
               
141-330
               

               
Cow position:
               
chr13:20683091-20682904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
141-331
               

               
Cow position:
               
chr13:4464145-4463962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
141-331
               

               
Cow position:
               
chr13:62474661-62474845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
133, 59
               

               
Conread position:
               
141-341
               

               
Cow position:
               
chr13:5091523-5091725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
40, 110
               

               
Conread position:
               
141-356
               

               
Cow position:
               
chr13:6835663-6835864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
167, 38
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr13:21155351-21155574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
100, 110
               

               
Conread position:
               
141-362
               

               
Cow position:
               
chr13:12618971-12619188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 115
               

               
Conread position:
               
141-365
               

               
Cow position:
               
chr13:24376628-24376417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
141-370
               

               
Cow position:
               
chr13:1363836-1363613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 117
               

               
Conread position:
               
141-376
               

               
Cow position:
               
chr13:61166316-61166537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
141-381
               

               
Cow position:
               
chr13:52929851-52929619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
141-391
               

               
Cow position:
               
chr13:8838852-8839093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
129, 82
               

               
Conread position:
               
141-394
               

               
Cow position:
               
chr13:52879550-52879297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
141-396
               

               
Cow position:
               
chr13:25531646-25531897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
133, 109
               

               
Conread position:
               
141-397
               

               
Cow position:
               
chr13:8201344-8201591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
174, 45
               

               
Conread position:
               
141-397
               

               
Cow position:
               
chr13:11954968-11955225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
141-397
               

               
Cow position:
               
chr13:18244002-18243754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
141-403
               

               
Cow position:
               
chr13:46181931-46181678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
141-404
               

               
Cow position:
               
chr13:49848063-49847809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
141-405
               

               
Cow position:
               
chr13:6153641-6153899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
141-405
               

               
Cow position:
               
chr13:15884875-15885138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
29, 117
               

               
Conread position:
               
141-405
               

               
Cow position:
               
chr13:43868974-43869229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
141-407
               

               
Cow position:
               
chr13:12614402-12614135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
16, 194
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr13:6060868-6061127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr13:8652296-8652561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr13:9593650-9593387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 109
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr13:12202507-12202243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr13:15528890-15529156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
129, 114
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr13:18835334-18835085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
151, 114
               

               
Conread position:
               
141-411
               

               
Cow position:
               
chr13:18989847-18989601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
141-411
               

               
Cow position:
               
chr13:32657654-32657922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
141-412
               

               
Cow position:
               
chr13:8524479-8524746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
252, 56
               

               
Conread position:
               
141-415
               

               
Cow position:
               
chr13:17966067-17966335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
206, 114
               

               
Conread position:
               
141-416
               

               
Cow position:
               
chr13:9665207-9664932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 122
               

               
Conread position:
               
141-417
               

               
Cow position:
               
chr13:12408145-12408416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
141-417
               

               
Cow position:
               
chr13:15166961-15166690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
113, 171
               

               
Conread position:
               
141-417
               

               
Cow position:
               
chr13:17346947-17346682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 118
               

               
Conread position:
               
141-417
               

               
Cow position:
               
chr13:31814013-31813747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
132, 82
               

               
Conread position:
               
141-417
               

               
Cow position:
               
chr13:37484132-37484407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
113, 91
               

               
Conread position:
               
141-417
               

               
Cow position:
               
chr13:60429932-60430206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
141-419
               

               
Cow position:
               
chr13:17970886-17971159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
113, 94
               

               
Conread position:
               
141-419
               

               
Cow position:
               
chr13:21176180-21176449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
121, 113
               

               
Conread position:
               
141-419
               

               
Cow position:
               
chr13:27493709-27493987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
141-420
               

               
Cow position:
               
chr13:5082792-5082520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
141-420
               

               
Cow position:
               
chr13:20683979-20684259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
130, 114
               

               
Conread position:
               
141-421
               

               
Cow position:
               
chr13:9265690-9265958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
55, 100
               

               
Conread position:
               
141-421
               

               
Cow position:
               
chr13:11644076-11643807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
141-421
               

               
Cow position:
               
chr13:12546768-12547040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
49, 110
               

               
Conread position:
               
141-421
               

               
Cow position:
               
chr13:18696984-18696709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
125, 40
               

               
Conread position:
               
141-422
               

               
Cow position:
               
chr13:43829394-43829110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
141-423
               

               
Cow position:
               
chr13:13176792-13176513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 21
               

               
Conread position:
               
141-423
               

               
Cow position:
               
chr13:60974225-60973946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chr13:36771278-36771555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chr13:37981608-37981878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chr13:38277995-38278282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chr13:43762311-43762034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 88
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr13:8609409-8609683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 38
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr13:15281795-15282070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr13:20231062-20231326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 64
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr13:20563138-20562857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 115
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr13:46736355-46736079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 110
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr13:53566737-53566465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
129, 114
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr13:56148679-56148385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 130
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr13:56160288-56160582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 130
               

               
Conread position:
               
141-426
               

               
Cow position:
               
chr13:11381580-11381860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
129, 89
               

               
Conread position:
               
141-426
               

               
Cow position:
               
chr13:23856354-23856074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 114
               

               
Conread position:
               
141-428
               

               
Cow position:
               
chr13:10928852-10929127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
178, 24
               

               
Conread position:
               
141-428
               

               
Cow position:
               
chr13:52284951-52284678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
141-430
               

               
Cow position:
               
chr13:37946811-37947092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
141-431
               

               
Cow position:
               
chr13:21283568-21283846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
126, 73
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr13:1042819-1043105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr13:2404881-2404619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr13:3315536-3315818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr13:17439628-17439911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr13:23166954-23167242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 108
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr13:40943386-40943098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
268, 113
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr13:51821750-51822017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
272, 32
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr13:61990196-61990469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
141-436
               

               
Cow position:
               
chr13:15349123-15349392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-439
               

               
Cow position:
               
chr13:2414172-2413881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
141-439
               

               
Cow position:
               
chr13:52585882-52586186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
141-441
               

               
Cow position:
               
chr13:4420489-4420178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
141-441
               

               
Cow position:
               
chr13:28683501-28683212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 22
               

               
Conread position:
               
141-441
               

               
Cow position:
               
chr13:48037763-48037472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
141-444
               

               
Cow position:
               
chr13:11460763-11460475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
272, 67
               

               
Conread position:
               
141-444
               

               
Cow position:
               
chr13:39368097-39367803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
141-461
               

               
Cow position:
               
chr13:18491741-18491422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
141-461
               

               
Cow position:
               
chr13:40722567-40722869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
141-464
               

               
Cow position:
               
chr13:43919118-43919445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
141-466
               

               
Cow position:
               
chr13:23479168-23478847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
141-466
               

               
Cow position:
               
chr13:26369668-26369347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
48, 130
               

               
Conread position:
               
141-469
               

               
Cow position:
               
chr13:23270071-23270374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
141-469
               

               
Cow position:
               
chr13:47964055-47964357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
141-476
               

               
Cow position:
               
chr13:24230354-24230018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
141-484
               

               
Cow position:
               
chr13:38012499-38012140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
48, 214
               

               
Conread position:
               
141-485
               

               
Cow position:
               
chr13:57494041-57494373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
30, 115
               

               
Conread position:
               
141-486
               

               
Cow position:
               
chr13:45023070-45023424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 104
               

               
Conread position:
               
141-486
               

               
Cow position:
               
chr13:48165283-48165624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
114, 78
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr13:5263150-5263481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr13:6540170-6540503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr13:12207185-12206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr13:15991084-15991433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 114
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr13:19223787-19223449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 112
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr13:1231789-1231439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr13:20174892-20174534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 111
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr13:49507707-49508034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:311572-311228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 146
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:3160533-3160198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
280, 65
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:8362608-8362951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:10988933-10989278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 117
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:15974756-15974414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:16343826-16343506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
108, 32
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:19188443-19188110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:20180559-20180229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 191
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:20378196-20378522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:20497791-20497438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:21287948-21288289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 17
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:23512509-23512176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:26847678-26848035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr13:33256638-33256293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:9974930-9975273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:10845735-10845413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:13089161-13088827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:15257240-15257572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 46
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:17021587-17021931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
283, 114
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:17977475-17977137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
201, 34
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:19022417-19022059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
124, 114
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:19393431-19393091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:23586263-23585905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 183
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:24586183-24585843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 63
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:25926934-25926583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:27525123-27525464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 114
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:36877214-36876860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 201
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:37804022-37803674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr13:44202133-44201804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
281, 12
               

               
Conread position:
               
141-494
               

               
Cow position:
               
chr13:15869263-15868901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 46
               

               
Conread position:
               
141-495
               

               
Cow position:
               
chr13:34728695-34729051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
141-496
               

               
Cow position:
               
chr13:6441958-6442318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
28, 118
               

               
Conread position:
               
141-496
               

               
Cow position:
               
chr13:14016427-14016773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
141-496
               

               
Cow position:
               
chr13:37069491-37069130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 104
               

               
Conread position:
               
141-497
               

               
Cow position:
               
chr13:20271072-20271442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
141-498
               

               
Cow position:
               
chr13:5279043-5279420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
141-498
               

               
Cow position:
               
chr13:15872587-15872223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
141-498
               

               
Cow position:
               
chr13:26698355-26698710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:8374630-8374973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:9900291-9899932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:12282976-12282622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 114
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:12670306-12670666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 66
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:15192748-15193101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 109
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:15195062-15195414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 122
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:17114237-17114595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:18999684-18999317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:19882896-19883248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 20
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:20879689-20880039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:21241951-21242288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:21275997-21275642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:24754023-24753677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:28552738-28552372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 197
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:32017384-32017730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 103
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:34281818-34281468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 130
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:35526069-35526408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
280, 28
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:37592796-37593158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:43594973-43595319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:45073786-45074116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
131, 23
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:45353188-45352813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:46112109-46111754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:51528303-51528651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:57475274-57475630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 105
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr13:60508977-60509339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 106
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr13:1959149-1958810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
129, 59
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr13:2774269-2773900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
196, 109
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr13:19364386-19364029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr13:20360412-20360060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 75
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr13:20893497-20893859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr13:32283266-32282911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 81
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr13:49824165-49823808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr13:52894286-52893933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr13:55674067-55674425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 107
               

               
Conread position:
               
141-501
               

               
Cow position:
               
chr13:15041330-15041691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
141-501
               

               
Cow position:
               
chr13:17745381-17745043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 68
               

               
Conread position:
               
141-501
               

               
Cow position:
               
chr13:23960671-23961025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
281, 114
               

               
Conread position:
               
141-501
               

               
Cow position:
               
chr13:38329768-38329402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 176
               

               
Conread position:
               
141-502
               

               
Cow position:
               
chr13:61976825-61977175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
261, 15
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr13:5671450-5671805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
292, 36
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr13:6079277-6079622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr13:17291991-17292350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
113, 168
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr13:18058107-18058465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr13:19581945-19582302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
134, 106
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr13:20473549-20473893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr13:21235545-21235886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 61
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr13:54583019-54582656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 194
               

               
Conread position:
               
141-505
               

               
Cow position:
               
chr13:20261183-20261552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 84
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr13:11767900-11768248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr13:12989986-12989641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr13:13261146-13260768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
109, 168
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr13:13501481-13501832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr13:16247797-16247423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr13:18166872-18166511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 12
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr13:23667397-23667037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr13:26480071-26480423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr13:43480199-43479843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
133, 109
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr13:49503390-49503761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr13:52055457-52055813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 46
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr13:58525076-58524720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr13:152096-151749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 89
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr13:9587445-9587805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 94
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr13:9800645-9800300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr13:13339002-13338635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
44, 130
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr13:19033694-19033333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr13:45594045-45593700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr13:49022732-49023086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 72
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr13:52749339-52749684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr13:54388879-54389244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr13:54702329-54701958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 114
               

               
Conread position:
               
141-508
               

               
Cow position:
               
chr13:44278495-44278124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
141-509
               

               
Cow position:
               
chr13:4552945-4552603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
141-512
               

               
Cow position:
               
chr13:24369722-24369358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 75
               

               
Conread position:
               
141-514
               

               
Cow position:
               
chr13:10924762-10925152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
141-514
               

               
Cow position:
               
chr13:26261656-26262021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 110
               

               
Conread position:
               
141-517
               

               
Cow position:
               
chr13:43139083-43139428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
141-518
               

               
Cow position:
               
chr13:25537774-25537399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
81, 115
               

               
Conread position:
               
141-522
               

               
Cow position:
               
chr13:21107280-21106904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
130, 80
               

               
Conread position:
               
141-522
               

               
Cow position:
               
chr13:55583337-55582953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
141-523
               

               
Cow position:
               
chr13:34995188-34995548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 15
               

               
Conread position:
               
142-323
               

               
Cow position:
               
chr13:12682404-12682584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 81
               

               
Conread position:
               
142-326
               

               
Cow position:
               
chr13:16711771-16711588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 112
               

               
Conread position:
               
142-328
               

               
Cow position:
               
chr13:30026257-30026066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr13:55295482-55295698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
123, 113
               

               
Conread position:
               
142-379
               

               
Cow position:
               
chr13:25062547-25062323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
142-403
               

               
Cow position:
               
chr13:20649838-20650101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 113
               

               
Conread position:
               
142-403
               

               
Cow position:
               
chr13:43194316-43194055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
123, 81
               

               
Conread position:
               
142-404
               

               
Cow position:
               
chr13:15110461-15110199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
142-405
               

               
Cow position:
               
chr13:17622422-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
142-408
               

               
Cow position:
               
chr13:20679491-20679220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
142-430
               

               
Cow position:
               
chr13:547626-547354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
142-435
               

               
Cow position:
               
chr13:18172479-18172190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
124, 113
               

               
Conread position:
               
142-485
               

               
Cow position:
               
chr13:37521591-37521949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
142-489
               

               
Cow position:
               
chr13:15446186-15445845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
142-489
               

               
Cow position:
               
chr13:48598051-48597705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 162
               

               
Conread position:
               
142-490
               

               
Cow position:
               
chr13:4664721-4665055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
142-490
               

               
Cow position:
               
chr13:20784729-20784389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 67
               

               
Conread position:
               
142-490
               

               
Cow position:
               
chr13:29831292-29831632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
142-490
               

               
Cow position:
               
chr13:47186365-47186025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
213, 108
               

               
Conread position:
               
142-490
               

               
Cow position:
               
chr13:56686573-56686238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
142-490
               

               
Cow position:
               
chr13:59687740-59688068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr13:12875831-12876190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr13:12925928-12925584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr13:15162517-15162850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr13:20839704-20839366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr13:34261373-34261022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
142-502
               

               
Cow position:
               
chr13:37818608-37818961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
47, 115
               

               
Conread position:
               
142-503
               

               
Cow position:
               
chr13:41154891-41155275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
130, 108
               

               
Conread position:
               
142-506
               

               
Cow position:
               
chr13:9142431-9142053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
142-506
               

               
Cow position:
               
chr13:34263228-34263594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 114
               

               
Conread position:
               
143-307
               

               
Cow position:
               
chr13:18942020-18941854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
143-330
               

               
Cow position:
               
chr13:26383095-26383280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
143-370
               

               
Cow position:
               
chr13:13306238-13306015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 143
               

               
Conread position:
               
143-370
               

               
Cow position:
               
chr13:31808652-31808440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
143-375
               

               
Cow position:
               
chr13:34375410-34375173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 165
               

               
Conread position:
               
143-381
               

               
Cow position:
               
chr13:17613486-17613248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
143-387
               

               
Cow position:
               
chr13:7488679-7488443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
143-407
               

               
Cow position:
               
chr13:17800212-17799962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
143-419
               

               
Cow position:
               
chr13:14771597-14771321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
42, 191
               

               
Conread position:
               
143-425
               

               
Cow position:
               
chr13:37640726-37640454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
143-428
               

               
Cow position:
               
chr13:55316049-55316336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
128, 112
               

               
Conread position:
               
143-432
               

               
Cow position:
               
chr13:20706066-20706348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
194, 112
               

               
Conread position:
               
143-475
               

               
Cow position:
               
chr13:13238717-13238396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
143-475
               

               
Cow position:
               
chr13:20605979-20606311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
143-475
               

               
Cow position:
               
chr13:34035502-34035183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
143-482
               

               
Cow position:
               
chr13:44626512-44626168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr13:607125-607464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 106
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr13:13954248-13954597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
143-487
               

               
Cow position:
               
chr13:1155568-1155907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
270, 60
               

               
Conread position:
               
143-488
               

               
Cow position:
               
chr13:7059611-7059255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 196
               

               
Conread position:
               
143-488
               

               
Cow position:
               
chr13:61188673-61188325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
143-489
               

               
Cow position:
               
chr13:6616612-6616967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
143-489
               

               
Cow position:
               
chr13:40491369-40491013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 119
               

               
Conread position:
               
143-498
               

               
Cow position:
               
chr13:15288789-15289132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr13:6931055-6930709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr13:12045198-12045560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr13:42114161-42113801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 131
               

               
Conread position:
               
143-500
               

               
Cow position:
               
chr13:47007590-47007929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
290, 66
               

               
Conread position:
               
143-506
               

               
Cow position:
               
chr13:17158735-17159102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 112
               

               
Conread position:
               
143-506
               

               
Cow position:
               
chr13:21269440-21269802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
49, 126
               

               
Conread position:
               
143-506
               

               
Cow position:
               
chr13:49805111-49804767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
143-507
               

               
Cow position:
               
chr13:20880786-20881141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
128, 104
               

               
Conread position:
               
143-515
               

               
Cow position:
               
chr13:17855510-17855138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
227, 42
               

               
Conread position:
               
143-515
               

               
Cow position:
               
chr13:60966907-60966551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
144-265
               

               
Cow position:
               
chr13:56275131-56275256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
47, 111
               

               
Conread position:
               
144-429
               

               
Cow position:
               
chr13:32535798-32535516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
144-432
               

               
Cow position:
               
chr13:51115889-51116168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 64
               

               
Conread position:
               
144-461
               

               
Cow position:
               
chr13:11321477-11321785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 112
               

               
Conread position:
               
144-461
               

               
Cow position:
               
chr13:12448853-12449166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
144-488
               

               
Cow position:
               
chr13:41806914-41806573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 179
               

               
Conread position:
               
144-500
               

               
Cow position:
               
chr13:867266-866916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 101
               

               
Conread position:
               
144-500
               

               
Cow position:
               
chr13:57002867-57002507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
144-515
               

               
Cow position:
               
chr13:26743262-26742897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
145-308
               

               
Cow position:
               
chr13:11147441-11147280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
145-328
               

               
Cow position:
               
chr13:7790152-7789964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
120, 42
               

               
Conread position:
               
145-342
               

               
Cow position:
               
chr13:10098853-10099044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
145-419
               

               
Cow position:
               
chr13:47756508-47756233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
145-439
               

               
Cow position:
               
chr13:11061125-11060839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 115
               

               
Conread position:
               
146-298
               

               
Cow position:
               
chr13:322647-322798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
146-317
               

               
Cow position:
               
chr13:25249017-25249189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
146-330
               

               
Cow position:
               
chr13:2463090-2463280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
146-487
               

               
Cow position:
               
chr13:30651312-30650983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
250, 39
               

               
Conread position:
               
146-488
               

               
Cow position:
               
chr13:20509869-20509524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
146-490
               

               
Cow position:
               
chr13:20288466-20288133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 13
               

               
Conread position:
               
146-500
               

               
Cow position:
               
chr13:6663614-6663971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
146-501
               

               
Cow position:
               
chr13:20820699-20821053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
191, 99
               

               
Conread position:
               
146-504
               

               
Cow position:
               
chr13:25695631-25695985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
147-292
               

               
Cow position:
               
chr13:29958815-29958676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
147-405
               

               
Cow position:
               
chr13:890036-890288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
147-504
               

               
Cow position:
               
chr13:17821132-17821476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 108
               

               
Conread position:
               
148-307
               

               
Cow position:
               
chr13:13809425-13809585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
148-501
               

               
Cow position:
               
chr13:44323035-44322677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
148-517
               

               
Cow position:
               
chr13:971759-972128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
149-299
               

               
Cow position:
               
chr13:6113165-6113318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 92
               

               
Conread position:
               
149-370
               

               
Cow position:
               
chr13:46324651-46324870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
149-417
               

               
Cow position:
               
chr13:54344906-54344653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
149-487
               

               
Cow position:
               
chr13:9906867-9906526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
188, 106
               

               
Conread position:
               
149-488
               

               
Cow position:
               
chr13:12745805-12745487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
114, 51
               

               
Conread position:
               
149-488
               

               
Cow position:
               
chr13:14878818-14879158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
149-500
               

               
Cow position:
               
chr13:53574104-53573762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
130, 106
               

               
Conread position:
               
149-506
               

               
Cow position:
               
chr13:25579053-25579416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
150-265
               

               
Cow position:
               
chr13:48944805-48944689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
31, 102
               

               
Conread position:
               
150-406
               

               
Cow position:
               
chr13:32826321-32826593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 123
               

               
Conread position:
               
150-490
               

               
Cow position:
               
chr13:58763499-58763814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
150-499
               

               
Cow position:
               
chr13:2803601-2803273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
150-499
               

               
Cow position:
               
chr13:16038156-16038496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
19, 107
               

               
Conread position:
               
151-421
               

               
Cow position:
               
chr13:6389512-6389264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
90, 113
               

               
Conread position:
               
151-508
               

               
Cow position:
               
chr13:46516190-46515836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
259, 8
               

               
Conread position:
               
152-486
               

               
Cow position:
               
chr13:18929662-18929324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
152-499
               

               
Cow position:
               
chr13:42200749-42200406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 63
               

               
Conread position:
               
153-299
               

               
Cow position:
               
chr13:54237481-54237339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 10
               

               
Conread position:
               
153-307
               

               
Cow position:
               
chr13:51108625-51108469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
153-327
               

               
Cow position:
               
chr13:10013624-10013451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
153-438
               

               
Cow position:
               
chr13:46311900-46312160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
153-467
               

               
Cow position:
               
chr13:20666259-20666568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
153-490
               

               
Cow position:
               
chr13:11260399-11260072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
153-499
               

               
Cow position:
               
chr13:24715374-24715035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
153-499
               

               
Cow position:
               
chr13:51940866-51940532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 104
               

               
Conread position:
               
153-500
               

               
Cow position:
               
chr13:25381092-25380729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
28, 99
               

               
Conread position:
               
153-504
               

               
Cow position:
               
chr13:14063393-14063740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
153-506
               

               
Cow position:
               
chr13:54094941-54094606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
153-519
               

               
Cow position:
               
chr13:6974293-6973928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
154-420
               

               
Cow position:
               
chr13:11591875-11591620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
154-490
               

               
Cow position:
               
chr13:13320913-13320592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 42
               

               
Conread position:
               
154-504
               

               
Cow position:
               
chr13:21280358-21280719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
187, 96
               

               
Conread position:
               
155-467
               

               
Cow position:
               
chr13:25547458-25547768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
268, 94
               

               
Conread position:
               
155-487
               

               
Cow position:
               
chr13:59170786-59170442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
155-490
               

               
Cow position:
               
chr13:18852208-18851883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 95
               

               
Conread position:
               
155-491
               

               
Cow position:
               
chr13:20217260-20217604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
33, 186
               

               
Conread position:
               
155-499
               

               
Cow position:
               
chr13:38283858-38284188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
216, 50
               

               
Conread position:
               
156-330
               

               
Cow position:
               
chr13:41253749-41253576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
123, 91
               

               
Conread position:
               
156-459
               

               
Cow position:
               
chr13:7076384-7076087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 64
               

               
Conread position:
               
156-484
               

               
Cow position:
               
chr13:18995256-18994923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
156-490
               

               
Cow position:
               
chr13:2192839-2192532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
156-499
               

               
Cow position:
               
chr13:14576334-14576001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
156-506
               

               
Cow position:
               
chr13:47188572-47188240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 183
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr13:21563868-21563521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
157-526
               

               
Cow position:
               
chr13:15945604-15945252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
158-330
               

               
Cow position:
               
chr13:5658603-5658771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
158-349
               

               
Cow position:
               
chr13:16024716-16024529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 114
               

               
Conread position:
               
158-380
               

               
Cow position:
               
chr13:34941528-34941741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
158-424
               

               
Cow position:
               
chr13:45726021-45725751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
158-436
               

               
Cow position:
               
chr13:11096302-11096035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
158-490
               

               
Cow position:
               
chr13:5758216-5758537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
158-490
               

               
Cow position:
               
chr13:25434995-25435311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 175
               

               
Conread position:
               
158-499
               

               
Cow position:
               
chr13:48251859-48252181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
158-512
               

               
Cow position:
               
chr13:17437743-17438088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
159-421
               

               
Cow position:
               
chr13:11820716-11820465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
173, 14
               

               
Conread position:
               
159-425
               

               
Cow position:
               
chr13:37381930-37381665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
159-479
               

               
Cow position:
               
chr13:52227976-52228292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
159-500
               

               
Cow position:
               
chr13:39826677-39826340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
160-389
               

               
Cow position:
               
chr13:50713325-50713110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
160-490
               

               
Cow position:
               
chr13:1569046-1568729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 97
               

               
Conread position:
               
160-499
               

               
Cow position:
               
chr13:5910773-5911105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
29, 144
               

               
Conread position:
               
160-499
               

               
Cow position:
               
chr13:22085621-22085944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
160-522
               

               
Cow position:
               
chr13:60375365-60375723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
106, 90
               

               
Conread position:
               
164-270
               

               
Cow position:
               
chr13:4514580-4514474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
164-495
               

               
Cow position:
               
chr13:19279209-19278886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 7
               

               
Conread position:
               
164-499
               

               
Cow position:
               
chr13:15194613-15194935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
101, 91
               

               
Conread position:
               
165-488
               

               
Cow position:
               
chr13:5060863-5060535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
165-504
               

               
Cow position:
               
chr13:21135782-21136130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
186, 90
               

               
Conread position:
               
165-516
               

               
Cow position:
               
chr13:27550857-27550505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
166-322
               

               
Cow position:
               
chr13:55947891-55947736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
166-425
               

               
Cow position:
               
chr13:13765900-13765654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
166-487
               

               
Cow position:
               
chr13:61253143-61252808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
167-504
               

               
Cow position:
               
chr13:6189500-6189818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
140, 64
               

               
Conread position:
               
167-506
               

               
Cow position:
               
chr13:20357777-20358107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
169-384
               

               
Cow position:
               
chr13:53536192-53536403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 122
               

               
Conread position:
               
169-421
               

               
Cow position:
               
chr13:56678129-56677883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
169-499
               

               
Cow position:
               
chr13:54128479-54128812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 164
               

               
Conread position:
               
170-499
               

               
Cow position:
               
chr13:47322291-47322606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
172-467
               

               
Cow position:
               
chr13:20871501-20871211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
173-496
               

               
Cow position:
               
chr13:16714149-16714475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
174-516
               

               
Cow position:
               
chr13:14967106-14967445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
175-432
               

               
Cow position:
               
chr13:13297782-13297536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
175-432
               

               
Cow position:
               
chr13:19320643-19320387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
96, 81
               

               
Conread position:
               
175-486
               

               
Cow position:
               
chr13:8667721-8667414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
175-488
               

               
Cow position:
               
chr13:15621922-15621606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 73
               

               
Conread position:
               
175-499
               

               
Cow position:
               
chr13:620153-620461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
175-506
               

               
Cow position:
               
chr13:4158771-4158439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
96, 158
               

               
Conread position:
               
175-506
               

               
Cow position:
               
chr13:19240544-19240220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr13:20155107-20154809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
179-486
               

               
Cow position:
               
chr13:12974906-12974614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
244, 17
               

               
Conread position:
               
179-489
               

               
Cow position:
               
chr13:46044260-46043970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
244, 18
               

               
Conread position:
               
179-504
               

               
Cow position:
               
chr13:7265021-7265324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
95, 56
               

               
Conread position:
               
179-517
               

               
Cow position:
               
chr13:49457777-49457469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
180-394
               

               
Cow position:
               
chr13:60389385-60389593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
180-486
               

               
Cow position:
               
chr13:49476188-49475870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
180-488
               

               
Cow position:
               
chr13:13533567-13533865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
254, 77
               

               
Conread position:
               
180-506
               

               
Cow position:
               
chr13:7332897-7333232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 75
               

               
Conread position:
               
181-419
               

               
Cow position:
               
chr13:55728002-55727772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
181-506
               

               
Cow position:
               
chr13:13196342-13196021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
108, 21
               

               
Conread position:
               
182-439
               

               
Cow position:
               
chr13:3989304-3989054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 155
               

               
Conread position:
               
182-484
               

               
Cow position:
               
chr13:24155644-24155311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
182-499
               

               
Cow position:
               
chr13:17498318-17498007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
186-421
               

               
Cow position:
               
chr13:17110316-17110095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
187-411
               

               
Cow position:
               
chr13:185626-185408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
187-421
               

               
Cow position:
               
chr13:51901688-51901452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
187-430
               

               
Cow position:
               
chr13:53330367-53330131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
200, 68
               

               
Conread position:
               
187-500
               

               
Cow position:
               
chr13:28291421-28291105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
188-499
               

               
Cow position:
               
chr13:45073162-45073459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
188-506
               

               
Cow position:
               
chr13:22227626-22227953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
189-486
               

               
Cow position:
               
chr13:50750960-50751253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
189-488
               

               
Cow position:
               
chr13:15659369-15659072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
216, 61
               

               
Conread position:
               
189-488
               

               
Cow position:
               
chr13:56034765-56035060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
189-500
               

               
Cow position:
               
chr13:25978097-25978409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
190-490
               

               
Cow position:
               
chr13:46329511-46329808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
190-507
               

               
Cow position:
               
chr13:18197510-18197831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
191-390
               

               
Cow position:
               
chr13:16187806-16187997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
192-425
               

               
Cow position:
               
chr13:3211642-3211413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
192-497
               

               
Cow position:
               
chr13:20137915-20137605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
222, 85
               

               
Conread position:
               
192-504
               

               
Cow position:
               
chr13:52477555-52477863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
193-463
               

               
Cow position:
               
chr13:15964408-15964120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
194-327
               

               
Cow position:
               
chr13:29802934-29802803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
195-425
               

               
Cow position:
               
chr13:42229407-42229177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 29
               

               
Conread position:
               
195-504
               

               
Cow position:
               
chr13:10040447-10040773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 199
               

               
Conread position:
               
198-499
               

               
Cow position:
               
chr13:27181115-27180823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
232, 52
               

               
Conread position:
               
199-490
               

               
Cow position:
               
chr13:19610481-19610769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
202-506
               

               
Cow position:
               
chr13:62008193-62007888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
204-506
               

               
Cow position:
               
chr13:21170609-21170307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
205-501
               

               
Cow position:
               
chr13:20868678-20868959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
206-425
               

               
Cow position:
               
chr13:38872875-38873080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
206-484
               

               
Cow position:
               
chr13:19778772-19779054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
206-499
               

               
Cow position:
               
chr13:7149305-7149025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 63
               

               
Conread position:
               
206-506
               

               
Cow position:
               
chr13:11231228-11231517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
208-499
               

               
Cow position:
               
chr13:7149438-7149712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
205, 49
               

               
Conread position:
               
209-424
               

               
Cow position:
               
chr13:827316-827111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
209-499
               

               
Cow position:
               
chr13:37775130-37775420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 5
               

               
Conread position:
               
210-422
               

               
Cow position:
               
chr13:17563809-17563607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
212-514
               

               
Cow position:
               
chr13:42672351-42672658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
213-488
               

               
Cow position:
               
chr13:14411956-14411688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
182, 37
               

               
Conread position:
               
213-490
               

               
Cow position:
               
chr13:15757190-15756911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
206, 57
               

               
Conread position:
               
214-467
               

               
Cow position:
               
chr13:55162280-55162023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
215-507
               

               
Cow position:
               
chr13:10221019-10220734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
215, 35
               

               
Conread position:
               
219-489
               

               
Cow position:
               
chr13:20115317-20115040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
219-506
               

               
Cow position:
               
chr13:20314555-20314846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
222-490
               

               
Cow position:
               
chr13:12673236-12673493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
223-438
               

               
Cow position:
               
chr13:24110546-24110331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
224-425
               

               
Cow position:
               
chr13:17838008-17837815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
224-501
               

               
Cow position:
               
chr13:17822892-17823167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
227-490
               

               
Cow position:
               
chr13:45108356-45108606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
227-508
               

               
Cow position:
               
chr13:25504589-25504315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
228-499
               

               
Cow position:
               
chr13:40154681-40154952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
190, 20
               

               
Conread position:
               
228-500
               

               
Cow position:
               
chr13:17350408-17350130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
230-490
               

               
Cow position:
               
chr13:17089470-17089718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
230-506
               

               
Cow position:
               
chr13:25561656-25561409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
230-507
               

               
Cow position:
               
chr13:1147098-1147375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
189, 29
               

               
Conread position:
               
231-508
               

               
Cow position:
               
chr13:16020904-16020638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
232-517
               

               
Cow position:
               
chr13:52459431-52459705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
233-499
               

               
Cow position:
               
chr13:52640900-52641163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
186, 17
               

               
Conread position:
               
233-504
               

               
Cow position:
               
chr13:17611500-17611769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
234-499
               

               
Cow position:
               
chr13:38035886-38035625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
236-405
               

               
Cow position:
               
chr13:60393830-60393668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
236-425
               

               
Cow position:
               
chr13:21295120-21294939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
238-489
               

               
Cow position:
               
chr13:584827-585078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
242-487
               

               
Cow position:
               
chr13:18340579-18340328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
251-500
               

               
Cow position:
               
chr13:55081178-55080923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
254-506
               

               
Cow position:
               
chr13:6183391-6183651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
171, 23
               

               
Conread position:
               
257-439
               

               
Cow position:
               
chr13:9117543-9117713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
257-459
               

               
Cow position:
               
chr13:8233022-8232835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
257-506
               

               
Cow position:
               
chr13:15069982-15069748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
235, 13
               

               
Conread position:
               
260-508
               

               
Cow position:
               
chr13:40541080-40541331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
171, 72
               

               
Conread position:
               
262-490
               

               
Cow position:
               
chr13:33974756-33974541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
263-432
               

               
Cow position:
               
chr13:19750737-19750572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 69
               

               
Conread position:
               
263-486
               

               
Cow position:
               
chr13:6926538-6926311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
158, 14
               

               
Conread position:
               
263-499
               

               
Cow position:
               
chr13:9707727-9707959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
143, 69
               

               
Conread position:
               
264-425
               

               
Cow position:
               
chr13:51813914-51814068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
264-490
               

               
Cow position:
               
chr13:19598644-19598870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
265-489
               

               
Cow position:
               
chr13:15993406-15993179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 67
               

               
Conread position:
               
265-506
               

               
Cow position:
               
chr13:34873609-34873365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
268-503
               

               
Cow position:
               
chr13:35557094-35557329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
269-459
               

               
Cow position:
               
chr13:42640398-42640218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
269-484
               

               
Cow position:
               
chr13:6465674-6465882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
146, 63
               

               
Conread position:
               
269-489
               

               
Cow position:
               
chr13:2776304-2776080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
152, 63
               

               
Conread position:
               
269-498
               

               
Cow position:
               
chr13:37985728-37985961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
154, 63
               

               
Conread position:
               
269-499
               

               
Cow position:
               
chr13:55765162-55765389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
91, 63
               

               
Conread position:
               
269-510
               

               
Cow position:
               
chr13:14645067-14644828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
154, 47
               

               
Conread position:
               
270-487
               

               
Cow position:
               
chr13:47675920-47676139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
151, 62
               

               
Conread position:
               
270-488
               

               
Cow position:
               
chr13:33054358-33054576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
149, 63
               

               
Conread position:
               
270-490
               

               
Cow position:
               
chr13:1462282-1462497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
157, 40
               

               
Conread position:
               
270-490
               

               
Cow position:
               
chr13:55494510-55494724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
270-499
               

               
Cow position:
               
chr13:7046885-7046666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
270-499
               

               
Cow position:
               
chr13:15997049-15996822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
270-500
               

               
Cow position:
               
chr13:21171555-21171785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
175, 58
               

               
Conread position:
               
270-501
               

               
Cow position:
               
chr13:9161937-9161718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
270-506
               

               
Cow position:
               
chr13:21980961-21981192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
271-489
               

               
Cow position:
               
chr13:50646621-50646833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
152, 25
               

               
Conread position:
               
271-499
               

               
Cow position:
               
chr13:57985924-57986148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
214, 61
               

               
Conread position:
               
271-501
               

               
Cow position:
               
chr13:15083673-15083445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
159, 60
               

               
Conread position:
               
272-487
               

               
Cow position:
               
chr13:50582807-50583020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
69, 50
               

               
Conread position:
               
272-490
               

               
Cow position:
               
chr13:84592-84386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
272-500
               

               
Cow position:
               
chr13:25941250-25941477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
152, 70
               

               
Conread position:
               
273-499
               

               
Cow position:
               
chr13:45439534-45439319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
275-499
               

               
Cow position:
               
chr13:28536312-28536535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
149, 52
               

               
Conread position:
               
277-490
               

               
Cow position:
               
chr13:8699729-8699948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
277-504
               

               
Cow position:
               
chr13:20520069-20519853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
277-517
               

               
Cow position:
               
chr13:14796214-14795973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
277-522
               

               
Cow position:
               
chr13:6980927-6980690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
124, 54
               

               
Conread position:
               
277-522
               

               
Cow position:
               
chr13:47243547-47243788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
136, 49
               

               
Conread position:
               
278-489
               

               
Cow position:
               
chr13:6486244-6486457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
140, 54
               

               
Conread position:
               
278-489
               

               
Cow position:
               
chr13:49356042-49356253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
139, 54
               

               
Conread position:
               
278-490
               

               
Cow position:
               
chr13:16908224-16908008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
278-499
               

               
Cow position:
               
chr13:15143836-15144045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
278-501
               

               
Cow position:
               
chr13:7104661-7104442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
279-500
               

               
Cow position:
               
chr13:10210653-10210868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 36
               

               
Conread position:
               
280-508
               

               
Cow position:
               
chr13:16096583-16096354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 113
               

               
Conread position:
               
281-506
               

               
Cow position:
               
chr13:10522937-10522721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
143, 6
               

               
Conread position:
               
281-514
               

               
Cow position:
               
chr13:17813475-17813241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
132, 51
               

               
Conread position:
               
282-490
               

               
Cow position:
               
chr13:52536568-52536366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
286-461
               

               
Cow position:
               
chr13:38702877-38703055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 49
               

               
Conread position:
               
287-499
               

               
Cow position:
               
chr13:15061483-15061704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 186
               

               
Conread position:
               
287-504
               

               
Cow position:
               
chr13:37614192-37614416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 211
               

               
Conread position:
               
291-487
               

               
Cow position:
               
chr13:4404525-4404332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
141, 41
               

               
Conread position:
               
291-514
               

               
Cow position:
               
chr13:28439403-28439184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
295-490
               

               
Cow position:
               
chr13:50622822-50623016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
296-486
               

               
Cow position:
               
chr13:24094328-24094518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
301-517
               

               
Cow position:
               
chr13:8637682-8637464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
122, 31
               

               
Conread position:
               
302-518
               

               
Cow position:
               
chr13:11565820-11565606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
303-521
               

               
Cow position:
               
chr13:1539222-1538998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
118, 12
               

               
Conread position:
               
304-497
               

               
Cow position:
               
chr13:10758109-10757928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
304-504
               

               
Cow position:
               
chr13:37554887-37555089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
10, 189
               

               
Conread position:
               
305-490
               

               
Cow position:
               
chr13:52177585-52177397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
305-507
               

               
Cow position:
               
chr13:11147037-11146831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
116, 27
               

               
Conread position:
               
306-507
               

               
Cow position:
               
chr13:4965371-4965181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
307-490
               

               
Cow position:
               
chr13:5992839-5992641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 172
               

               
Conread position:
               
311-425
               

               
Cow position:
               
chr13:32363206-32363316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
311-504
               

               
Cow position:
               
chr13:57323121-57322930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
314-489
               

               
Cow position:
               
chr13:9124895-9124724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
314-489
               

               
Cow position:
               
chr13:30148592-30148759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
314-506
               

               
Cow position:
               
chr13:6113555-6113752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
314-507
               

               
Cow position:
               
chr13:13796840-13797040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
315-499
               

               
Cow position:
               
chr13:45499199-45499017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
315-503
               

               
Cow position:
               
chr13:11942209-11942392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
149, 17
               

               
Conread position:
               
315-522
               

               
Cow position:
               
chr13:1363425-1363225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
316-507
               

               
Cow position:
               
chr13:24107579-24107766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 16
               

               
Conread position:
               
318-486
               

               
Cow position:
               
chr13:8537789-8537617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
318-500
               

               
Cow position:
               
chr13:6012750-6012938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
22, 158
               

               
Conread position:
               
319-431
               

               
Cow position:
               
chr13:25453273-25453161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
319-464
               

               
Cow position:
               
chr13:6975879-6976022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
319-489
               

               
Cow position:
               
chr13:48127074-48126900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
319-514
               

               
Cow position:
               
chr13:37405684-37405489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 139
               

               
Conread position:
               
323-489
               

               
Cow position:
               
chr13:40483011-40483184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
326-488
               

               
Cow position:
               
chr13:52913837-52913673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
326-499
               

               
Cow position:
               
chr13:3594285-3594118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
328-501
               

               
Cow position:
               
chr13:5175558-5175383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
330-506
               

               
Cow position:
               
chr13:714500-714685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
334-501
               

               
Cow position:
               
chr13:58662206-58662026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
335-486
               

               
Cow position:
               
chr13:57446165-57446314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
335-490
               

               
Cow position:
               
chr13:27198862-27198709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 126
               

               
Conread position:
               
335-496
               

               
Cow position:
               
chr13:9492725-9492564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
335-504
               

               
Cow position:
               
chr13:23478855-23478682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
336-484
               

               
Cow position:
               
chr13:55143226-55143075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
336-490
               

               
Cow position:
               
chr13:16525270-16525433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
336-490
               

               
Cow position:
               
chr13:21277514-21277662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
336-491
               

               
Cow position:
               
chr13:13265514-13265358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
336-495
               

               
Cow position:
               
chr13:52249095-52249254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
128, 140
               

               
Conread position:
               
336-498
               

               
Cow position:
               
chr13:23399719-23399553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
336-499
               

               
Cow position:
               
chr13:55713483-55713637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
336-501
               

               
Cow position:
               
chr13:53619957-53619785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
86, 162
               

               
Conread position:
               
336-501
               

               
Cow position:
               
chr13:53850777-53850605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 162
               

               
Conread position:
               
336-502
               

               
Cow position:
               
chr13:33854731-33854898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
85, 135
               

               
Conread position:
               
336-504
               

               
Cow position:
               
chr13:21188321-21188166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
336-506
               

               
Cow position:
               
chr13:15060593-15060433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 92
               

               
Conread position:
               
336-506
               

               
Cow position:
               
chr13:21425877-21426039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
337-498
               

               
Cow position:
               
chr13:37723532-37723377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
337-500
               

               
Cow position:
               
chr13:23823082-23823245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
338-499
               

               
Cow position:
               
chr13:56431873-56432035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
339-490
               

               
Cow position:
               
chr13:22345324-22345480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
339-500
               

               
Cow position:
               
chr13:57770036-57770198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
339-506
               

               
Cow position:
               
chr13:43342518-43342346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
339-512
               

               
Cow position:
               
chr13:34299909-34300077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
153, 82
               

               
Conread position:
               
340-457
               

               
Cow position:
               
chr13:16790158-16790041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-486
               

               
Cow position:
               
chr13:1339192-1339346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
340-487
               

               
Cow position:
               
chr13:43576963-43576808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
340-499
               

               
Cow position:
               
chr13:55775309-55775151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
340-500
               

               
Cow position:
               
chr13:3149482-3149648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
340-506
               

               
Cow position:
               
chr13:3153699-3153526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
340-506
               

               
Cow position:
               
chr13:9327138-9327311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 159
               

               
Conread position:
               
340-513
               

               
Cow position:
               
chr13:37946440-37946613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 159
               

               
Conread position:
               
340-534
               

               
Cow position:
               
chr13:16163531-16163341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
177, 127
               

               
Conread position:
               
340-538
               

               
Cow position:
               
chr13:6951528-6951323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 132
               

               
Conread position:
               
341-501
               

               
Cow position:
               
chr13:28081670-28081501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 159
               

               
Conread position:
               
342-490
               

               
Cow position:
               
chr13:49283833-49283983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
342-498
               

               
Cow position:
               
chr13:10711468-10711628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 137
               

               
Conread position:
               
342-517
               

               
Cow position:
               
chr13:22601746-22601922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
150, 76
               

               
Conread position:
               
343-499
               

               
Cow position:
               
chr13:23795442-23795592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
343-506
               

               
Cow position:
               
chr13:5659821-5659985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 160
               

               
Conread position:
               
343-508
               

               
Cow position:
               
chr13:9551307-9551140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
344-489
               

               
Cow position:
               
chr13:9108730-9108876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
344-499
               

               
Cow position:
               
chr13:5092449-5092609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
347-506
               

               
Cow position:
               
chr13:14782284-14782127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 118
               

               
Conread position:
               
352-490
               

               
Cow position:
               
chr13:7097523-7097381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
352-490
               

               
Cow position:
               
chr13:25313212-25313354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
352-499
               

               
Cow position:
               
chr13:38396094-38395940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
352-504
               

               
Cow position:
               
chr13:25679258-25679108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
352-508
               

               
Cow position:
               
chr13:47651479-47651636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 141
               

               
Conread position:
               
353-490
               

               
Cow position:
               
chr13:3003410-3003281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
353-506
               

               
Cow position:
               
chr13:8367654-8367498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 141
               

               
Conread position:
               
356-490
               

               
Cow position:
               
chr13:17015192-17015326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
356-506
               

               
Cow position:
               
chr13:38484469-38484318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
358-489
               

               
Cow position:
               
chr13:53847190-53847323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
359-499
               

               
Cow position:
               
chr13:41474802-41474662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 107
               

               
Conread position:
               
360-506
               

               
Cow position:
               
chr13:27727122-27726983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
361-499
               

               
Cow position:
               
chr13:41979212-41979351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
370-524
               

               
Cow position:
               
chr13:53138354-53138201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 61
               
Show alignments to all cow chromosomes.