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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_007632.5
        

               
Conread position:
               
111-307
               

               
Cow position:
               
chr15:16936562-16936766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
111-486
               

               
Cow position:
               
chr15:11559080-11559450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
111-501
               

               
Cow position:
               
chr15:5730217-5729843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
117-431
               

               
Cow position:
               
chr15:36782055-36782367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
118-506
               

               
Cow position:
               
chr15:22531925-22531555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
123-500
               

               
Cow position:
               
chr15:34140241-34139878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
125-489
               

               
Cow position:
               
chr15:18975504-18975864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
128-489
               

               
Cow position:
               
chr15:21608465-21608824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
128-495
               

               
Cow position:
               
chr15:9970719-9971067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
137, 16
               

               
Conread position:
               
128-506
               

               
Cow position:
               
chr15:30986030-30986403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
131-266
               

               
Cow position:
               
chr15:7827782-7827916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
132-504
               

               
Cow position:
               
chr15:5408656-5409011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
138-414
               

               
Cow position:
               
chr15:10660303-10660576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr15:16018282-16018068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
149, 58
               

               
Conread position:
               
139-395
               

               
Cow position:
               
chr15:26701830-26702075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
139-401
               

               
Cow position:
               
chr15:3726366-3726116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
139-484
               

               
Cow position:
               
chr15:8354291-8353945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 116
               

               
Conread position:
               
140-485
               

               
Cow position:
               
chr15:35112631-35112970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 114
               

               
Conread position:
               
140-488
               

               
Cow position:
               
chr15:16543211-16543538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
230, 76
               

               
Conread position:
               
141-237
               

               
Cow position:
               
chr15:26158371-26158467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
141-246
               

               
Cow position:
               
chr15:1128239-1128135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
141-264
               

               
Cow position:
               
chr15:5571390-5571515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
141-265
               

               
Cow position:
               
chr15:36347011-36346882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 115
               

               
Conread position:
               
141-281
               

               
Cow position:
               
chr15:45217062-45216926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
141-287
               

               
Cow position:
               
chr15:33678942-33678802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
141-292
               

               
Cow position:
               
chr15:29792666-29792811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
141-299
               

               
Cow position:
               
chr15:12316170-12316016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
141-299
               

               
Cow position:
               
chr15:20725372-20725527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
141-299
               

               
Cow position:
               
chr15:21523033-21522876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 109
               

               
Conread position:
               
141-303
               

               
Cow position:
               
chr15:53402752-53402905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
141-304
               

               
Cow position:
               
chr15:23486923-23487083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr15:10845968-10845801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr15:23775706-23775857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr15:23927224-23927392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr15:34144909-34145072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
141-308
               

               
Cow position:
               
chr15:11362932-11363095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
141-309
               

               
Cow position:
               
chr15:36422899-36422740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
141-311
               

               
Cow position:
               
chr15:33770863-33770691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
141-317
               

               
Cow position:
               
chr15:6046066-6046244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
141-320
               

               
Cow position:
               
chr15:4350355-4350534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
141-323
               

               
Cow position:
               
chr15:15707865-15708048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
141-325
               

               
Cow position:
               
chr15:11646242-11646428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
141-325
               

               
Cow position:
               
chr15:40009404-40009590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
141-327
               

               
Cow position:
               
chr15:22751697-22751514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr15:2210820-2210635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr15:25306786-25306606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr15:30820590-30820776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr15:52739875-52740065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
141-329
               

               
Cow position:
               
chr15:18206266-18206452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
141-330
               

               
Cow position:
               
chr15:1301382-1301195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
141-330
               

               
Cow position:
               
chr15:9871168-9871358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
131, 108
               

               
Conread position:
               
141-333
               

               
Cow position:
               
chr15:46611170-46610987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
141-339
               

               
Cow position:
               
chr15:12441579-12441775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
141-357
               

               
Cow position:
               
chr15:38877061-38877268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
141-363
               

               
Cow position:
               
chr15:27281114-27280901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 110
               

               
Conread position:
               
141-370
               

               
Cow position:
               
chr15:15881177-15880949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
42, 117
               

               
Conread position:
               
141-370
               

               
Cow position:
               
chr15:47279894-47280116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
141-386
               

               
Cow position:
               
chr15:13515614-13515373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
129, 116
               

               
Conread position:
               
141-397
               

               
Cow position:
               
chr15:43248525-43248782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 110
               

               
Conread position:
               
141-399
               

               
Cow position:
               
chr15:4535153-4534905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
141-399
               

               
Cow position:
               
chr15:35417379-35417631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
141-402
               

               
Cow position:
               
chr15:5727884-5727646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
141-403
               

               
Cow position:
               
chr15:21836936-21836674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
48, 160
               

               
Conread position:
               
141-403
               

               
Cow position:
               
chr15:25110922-25111182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
141-407
               

               
Cow position:
               
chr15:26404520-26404269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr15:6905307-6905062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr15:10336001-10335742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr15:12655666-12655931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr15:20352075-20351817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr15:41619941-41620205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
141-411
               

               
Cow position:
               
chr15:23768017-23768275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 109
               

               
Conread position:
               
141-416
               

               
Cow position:
               
chr15:9494051-9494316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
132, 103
               

               
Conread position:
               
141-417
               

               
Cow position:
               
chr15:53045633-53045901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
141-418
               

               
Cow position:
               
chr15:45584967-45584708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
141-419
               

               
Cow position:
               
chr15:7535423-7535681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
141-419
               

               
Cow position:
               
chr15:23598066-23598342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
141-420
               

               
Cow position:
               
chr15:47843012-47843278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 47
               

               
Conread position:
               
141-421
               

               
Cow position:
               
chr15:6530601-6530876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
141-421
               

               
Cow position:
               
chr15:33976443-33976723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
186, 123
               

               
Conread position:
               
141-422
               

               
Cow position:
               
chr15:40999823-41000098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 0
               

               
Conread position:
               
141-423
               

               
Cow position:
               
chr15:1830807-1830535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
64, 118
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chr15:16307658-16307390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
266, 95
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr15:363269-362994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr15:16616444-16616159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr15:29331249-29330974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr15:32287511-32287772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
48, 105
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr15:50302429-50302152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
141-426
               

               
Cow position:
               
chr15:2669146-2668873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
141-426
               

               
Cow position:
               
chr15:10608060-10608337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
141-429
               

               
Cow position:
               
chr15:27863081-27863362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
141-430
               

               
Cow position:
               
chr15:21388922-21389200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
141-430
               

               
Cow position:
               
chr15:22136928-22136653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
141-430
               

               
Cow position:
               
chr15:34206943-34207224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr15:10737503-10737781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr15:29604470-29604739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr15:39316589-39316881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr15:42788908-42789187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
132, 17
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr15:43750760-43750451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 257
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr15:47042395-47042670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
133, 37
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr15:52611555-52611264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
137, 109
               

               
Conread position:
               
141-433
               

               
Cow position:
               
chr15:44641142-44640854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
52, 87
               

               
Conread position:
               
141-438
               

               
Cow position:
               
chr15:16640026-16639735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
163, 91
               

               
Conread position:
               
141-443
               

               
Cow position:
               
chr15:24941130-24941412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
43, 113
               

               
Conread position:
               
141-461
               

               
Cow position:
               
chr15:25386688-25386365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 111
               

               
Conread position:
               
141-461
               

               
Cow position:
               
chr15:36773452-36773761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
141-469
               

               
Cow position:
               
chr15:21908181-21907862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
141-479
               

               
Cow position:
               
chr15:1804086-1804424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
141-481
               

               
Cow position:
               
chr15:2952883-2953226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
141-481
               

               
Cow position:
               
chr15:12785678-12785336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 113
               

               
Conread position:
               
141-481
               

               
Cow position:
               
chr15:52482585-52482922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
141-481
               

               
Cow position:
               
chr15:53164264-53163927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
141-483
               

               
Cow position:
               
chr15:21582673-21583022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
141-484
               

               
Cow position:
               
chr15:9622435-9622084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 116
               

               
Conread position:
               
141-485
               

               
Cow position:
               
chr15:23275780-23275436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
279, 58
               

               
Conread position:
               
141-485
               

               
Cow position:
               
chr15:24616819-24616470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
41, 116
               

               
Conread position:
               
141-485
               

               
Cow position:
               
chr15:26903439-26903096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
141-485
               

               
Cow position:
               
chr15:43827528-43827869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
277, 109
               

               
Conread position:
               
141-486
               

               
Cow position:
               
chr15:1297983-1297648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
141-486
               

               
Cow position:
               
chr15:4485387-4485050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
46, 108
               

               
Conread position:
               
141-486
               

               
Cow position:
               
chr15:6647692-6647352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
141-486
               

               
Cow position:
               
chr15:25907154-25906820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
141-486
               

               
Cow position:
               
chr15:31857834-31857491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 134
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr15:608392-608044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr15:17233439-17233087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 111
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr15:24797567-24797902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
282, 20
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr15:5234758-5235091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr15:8428261-8427912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 142
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr15:16823183-16822850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
108, 118
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr15:22532483-22532153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 115
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr15:23572433-23572789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 161
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr15:24968039-24967701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr15:30001931-30001596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr15:85003-85347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr15:5071854-5072199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr15:6905783-6905438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 132
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr15:16667257-16667599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 75
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr15:20459054-20459412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr15:21803413-21803766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr15:24994275-24994612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
268, 71
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr15:30047297-30047655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
127, 114
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr15:36435452-36435101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 111
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr15:37381873-37381528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr15:43030779-43031127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 117
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr15:44658603-44658265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr15:1083130-1083472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 109
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr15:1329857-1330211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 116
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr15:10570372-10570697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
129, 26
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr15:11658323-11658685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
116, 154
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr15:12304887-12304537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 114
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr15:13285282-13284933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
58, 132
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr15:26911835-26912170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 17
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr15:39619400-39619040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 94
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr15:43776590-43776269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
141-494
               

               
Cow position:
               
chr15:11011359-11011698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
141-495
               

               
Cow position:
               
chr15:16657739-16657363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
141-495
               

               
Cow position:
               
chr15:32323959-32324315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 106
               

               
Conread position:
               
141-495
               

               
Cow position:
               
chr15:38837992-38837635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
141-498
               

               
Cow position:
               
chr15:5444226-5443871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
141-498
               

               
Cow position:
               
chr15:50341366-50341006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
159, 139
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:10456767-10457138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
265, 114
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:14870988-14870645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
113, 74
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:17084454-17084095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:19403227-19402894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:19771377-19771026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:20289826-20290169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:21821679-21822038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:21941601-21941959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:24285227-24284894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 110
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:26919032-26919379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 46
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:27900259-27900616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 88
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:36888069-36887729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
277, 78
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:39598488-39598134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 109
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:40798183-40798527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
269, 109
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:43626712-43626354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:46563248-46563588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:47843865-47844197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
286, 72
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:49738801-49739127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:49922386-49922025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr15:50177351-50177016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr15:275889-275531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
250, 67
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr15:35838843-35839209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr15:38162253-38161888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
5, 83
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr15:50957553-50957922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
141-501
               

               
Cow position:
               
chr15:12170488-12170148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 81
               

               
Conread position:
               
141-501
               

               
Cow position:
               
chr15:12723333-12722971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 108
               

               
Conread position:
               
141-501
               

               
Cow position:
               
chr15:23798278-23798636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
141-501
               

               
Cow position:
               
chr15:36621660-36621287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
141-501
               

               
Cow position:
               
chr15:45245301-45245655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
141-502
               

               
Cow position:
               
chr15:23696665-23697017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
196, 114
               

               
Conread position:
               
141-503
               

               
Cow position:
               
chr15:41125325-41125671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
236, 109
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr15:14020718-14020381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:4138379-4138017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 110
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:6970229-6969866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:7430223-7429850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 110
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:7456943-7456599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
125, 113
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:16604068-16603713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:17100464-17100822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:19186373-19186739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:20482595-20482945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
57, 156
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:22531307-22530964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
132, 87
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:25208523-25208877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 64
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:26896469-26896817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
289, 67
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:27972969-27973323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 119
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:35642266-35641894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:37645221-37644872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 33
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr15:40957823-40957457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr15:7192019-7192363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr15:16112647-16112277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr15:26079118-26079465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr15:33625195-33624850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 5
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr15:53036723-53037081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
124, 33
               

               
Conread position:
               
141-508
               

               
Cow position:
               
chr15:14505671-14505324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
196, 110
               

               
Conread position:
               
141-509
               

               
Cow position:
               
chr15:38883398-38883025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 193
               

               
Conread position:
               
141-511
               

               
Cow position:
               
chr15:11995780-11996150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 117
               

               
Conread position:
               
141-512
               

               
Cow position:
               
chr15:39599688-39599326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 109
               

               
Conread position:
               
141-514
               

               
Cow position:
               
chr15:36391913-36391546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
141-517
               

               
Cow position:
               
chr15:794771-795147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
141-517
               

               
Cow position:
               
chr15:37931519-37931863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
141-517
               

               
Cow position:
               
chr15:41225319-41225702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
131, 72
               

               
Conread position:
               
141-520
               

               
Cow position:
               
chr15:20486967-20487333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
142-299
               

               
Cow position:
               
chr15:24038156-24038312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
126, 80
               

               
Conread position:
               
142-303
               

               
Cow position:
               
chr15:53680523-53680674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
142-325
               

               
Cow position:
               
chr15:37777603-37777417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
48, 171
               

               
Conread position:
               
142-331
               

               
Cow position:
               
chr15:17858993-17859172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
142-363
               

               
Cow position:
               
chr15:5632923-5632711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
187, 48
               

               
Conread position:
               
142-396
               

               
Cow position:
               
chr15:6657352-6657096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 122
               

               
Conread position:
               
142-407
               

               
Cow position:
               
chr15:13387324-13387063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
123, 113
               

               
Conread position:
               
142-418
               

               
Cow position:
               
chr15:51632795-51633083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
142-421
               

               
Cow position:
               
chr15:39621588-39621310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
142-432
               

               
Cow position:
               
chr15:5726569-5726286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
142-432
               

               
Cow position:
               
chr15:35945771-35945490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
142-432
               

               
Cow position:
               
chr15:43788488-43788223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
142-461
               

               
Cow position:
               
chr15:19119359-19119666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
43, 196
               

               
Conread position:
               
142-466
               

               
Cow position:
               
chr15:32226631-32226944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
142-486
               

               
Cow position:
               
chr15:5420641-5420980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
142, 31
               

               
Conread position:
               
142-487
               

               
Cow position:
               
chr15:21421188-21420848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 118
               

               
Conread position:
               
142-489
               

               
Cow position:
               
chr15:21832179-21832545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 200
               

               
Conread position:
               
142-489
               

               
Cow position:
               
chr15:42143099-42142772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
142-490
               

               
Cow position:
               
chr15:21894027-21893678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr15:6226947-6227285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
240, 22
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr15:22939082-22939435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 13
               

               
Conread position:
               
142-504
               

               
Cow position:
               
chr15:50322840-50322492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 129
               

               
Conread position:
               
142-506
               

               
Cow position:
               
chr15:2800208-2799882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
142-506
               

               
Cow position:
               
chr15:25666978-25667343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
142-509
               

               
Cow position:
               
chr15:22938526-22938889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
143-279
               

               
Cow position:
               
chr15:38394664-38394528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
143-283
               

               
Cow position:
               
chr15:41583154-41583015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
143-290
               

               
Cow position:
               
chr15:37231599-37231738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
143-298
               

               
Cow position:
               
chr15:5498785-5498943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
143-324
               

               
Cow position:
               
chr15:11629634-11629820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
143-330
               

               
Cow position:
               
chr15:16904871-16904689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 114
               

               
Conread position:
               
143-331
               

               
Cow position:
               
chr15:47105277-47105099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
143-370
               

               
Cow position:
               
chr15:9526229-9526455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 137
               

               
Conread position:
               
143-379
               

               
Cow position:
               
chr15:25584849-25585076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
125, 60
               

               
Conread position:
               
143-386
               

               
Cow position:
               
chr15:33285125-33284884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
143-386
               

               
Cow position:
               
chr15:33303575-33303330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 195
               

               
Conread position:
               
143-386
               

               
Cow position:
               
chr15:43913844-43914088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
42, 115
               

               
Conread position:
               
143-407
               

               
Cow position:
               
chr15:6586473-6586744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
104, 93
               

               
Conread position:
               
143-420
               

               
Cow position:
               
chr15:2144889-2145165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 13
               

               
Conread position:
               
143-421
               

               
Cow position:
               
chr15:52454685-52454403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 195
               

               
Conread position:
               
143-475
               

               
Cow position:
               
chr15:32242222-32241888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
143-475
               

               
Cow position:
               
chr15:38806255-38806592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 120
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr15:17763150-17762817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
143-484
               

               
Cow position:
               
chr15:17196385-17196049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr15:44436976-44436659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
291, 44
               

               
Conread position:
               
143-488
               

               
Cow position:
               
chr15:4676761-4677098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
143-489
               

               
Cow position:
               
chr15:39405975-39405641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
43, 84
               

               
Conread position:
               
143-489
               

               
Cow position:
               
chr15:45479250-45478898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 87
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr15:6168275-6168644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr15:11560268-11560631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 115
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr15:32979794-32980145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
143-501
               

               
Cow position:
               
chr15:1722607-1722954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 89
               

               
Conread position:
               
143-506
               

               
Cow position:
               
chr15:2968577-2968216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
143-506
               

               
Cow position:
               
chr15:4296008-4295644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
143-507
               

               
Cow position:
               
chr15:3700042-3700400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 113
               

               
Conread position:
               
143-517
               

               
Cow position:
               
chr15:8007225-8006850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
144-416
               

               
Cow position:
               
chr15:37205287-37205025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
144-432
               

               
Cow position:
               
chr15:2141057-2141342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
144-436
               

               
Cow position:
               
chr15:42415502-42415211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
144-499
               

               
Cow position:
               
chr15:4178695-4179050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
144-506
               

               
Cow position:
               
chr15:24411656-24411321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
145-306
               

               
Cow position:
               
chr15:5691624-5691471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
145-404
               

               
Cow position:
               
chr15:26421357-26421607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
145-414
               

               
Cow position:
               
chr15:15573583-15573856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
145-419
               

               
Cow position:
               
chr15:5567184-5566904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
145-461
               

               
Cow position:
               
chr15:22871848-22871544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
145-499
               

               
Cow position:
               
chr15:29026639-29026994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
146-344
               

               
Cow position:
               
chr15:44256718-44256521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
146-371
               

               
Cow position:
               
chr15:24044858-24045078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
133, 86
               

               
Conread position:
               
146-379
               

               
Cow position:
               
chr15:23115084-23114848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 193
               

               
Conread position:
               
146-416
               

               
Cow position:
               
chr15:49258103-49257841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
146-419
               

               
Cow position:
               
chr15:6082921-6083197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
110, 8
               

               
Conread position:
               
146-419
               

               
Cow position:
               
chr15:46868471-46868740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
126, 108
               

               
Conread position:
               
146-485
               

               
Cow position:
               
chr15:33643330-33642993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 69
               

               
Conread position:
               
146-488
               

               
Cow position:
               
chr15:20472308-20472644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
146-499
               

               
Cow position:
               
chr15:22930099-22930461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
35, 116
               

               
Conread position:
               
146-499
               

               
Cow position:
               
chr15:44377516-44377162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
146-506
               

               
Cow position:
               
chr15:286719-286356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
147-298
               

               
Cow position:
               
chr15:22095366-22095215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
147-499
               

               
Cow position:
               
chr15:43673699-43674057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
30, 6
               

               
Conread position:
               
147-504
               

               
Cow position:
               
chr15:4788731-4789083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
148-337
               

               
Cow position:
               
chr15:14856229-14856415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
148-379
               

               
Cow position:
               
chr15:16439590-16439817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
148-424
               

               
Cow position:
               
chr15:17353409-17353678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
148-486
               

               
Cow position:
               
chr15:7307914-7308256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
148-489
               

               
Cow position:
               
chr15:20370218-20370553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 105
               

               
Conread position:
               
148-490
               

               
Cow position:
               
chr15:36259364-36259699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 107
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr15:225569-225913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 71
               

               
Conread position:
               
148-499
               

               
Cow position:
               
chr15:20422540-20422876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 182
               

               
Conread position:
               
148-506
               

               
Cow position:
               
chr15:36353907-36353549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 88
               

               
Conread position:
               
149-430
               

               
Cow position:
               
chr15:12870626-12870901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
150-294
               

               
Cow position:
               
chr15:34219423-34219287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
150-464
               

               
Cow position:
               
chr15:10512034-10512345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
116, 70
               

               
Conread position:
               
150-500
               

               
Cow position:
               
chr15:662235-662576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
152-399
               

               
Cow position:
               
chr15:5535992-5535754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 130
               

               
Conread position:
               
152-432
               

               
Cow position:
               
chr15:16583471-16583729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
152-456
               

               
Cow position:
               
chr15:51898465-51898157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
152-475
               

               
Cow position:
               
chr15:23180672-23180358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
152-488
               

               
Cow position:
               
chr15:30982159-30981852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
152-489
               

               
Cow position:
               
chr15:45182-45527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
152-500
               

               
Cow position:
               
chr15:20391044-20391389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
249, 12
               

               
Conread position:
               
152-508
               

               
Cow position:
               
chr15:47822043-47821713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
153-299
               

               
Cow position:
               
chr15:13684033-13684178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
153-322
               

               
Cow position:
               
chr15:23703008-23702846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
153-408
               

               
Cow position:
               
chr15:4093699-4093948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
184, 111
               

               
Conread position:
               
153-432
               

               
Cow position:
               
chr15:47592425-47592702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
41, 159
               

               
Conread position:
               
153-486
               

               
Cow position:
               
chr15:915612-915949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
153-487
               

               
Cow position:
               
chr15:20534211-20534552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
153-490
               

               
Cow position:
               
chr15:245010-244680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
257, 46
               

               
Conread position:
               
153-490
               

               
Cow position:
               
chr15:10245772-10246097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
256, 21
               

               
Conread position:
               
153-490
               

               
Cow position:
               
chr15:29810348-29810023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 36
               

               
Conread position:
               
153-499
               

               
Cow position:
               
chr15:28924530-28924873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
153-506
               

               
Cow position:
               
chr15:24031420-24031078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
153-507
               

               
Cow position:
               
chr15:6462263-6462610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
154-486
               

               
Cow position:
               
chr15:33306342-33306022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
116, 90
               

               
Conread position:
               
154-489
               

               
Cow position:
               
chr15:38036706-38037046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 162
               

               
Conread position:
               
155-307
               

               
Cow position:
               
chr15:31502571-31502721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
132, 95
               

               
Conread position:
               
155-417
               

               
Cow position:
               
chr15:50089214-50088956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
155-432
               

               
Cow position:
               
chr15:13554586-13554315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
155-487
               

               
Cow position:
               
chr15:34896994-34896662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
155-499
               

               
Cow position:
               
chr15:10088551-10088210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr15:9107267-9106933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr15:18671222-18671561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 94
               

               
Conread position:
               
157-490
               

               
Cow position:
               
chr15:22553313-22553643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 64
               

               
Conread position:
               
157-502
               

               
Cow position:
               
chr15:14576564-14576216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
89, 179
               

               
Conread position:
               
157-506
               

               
Cow position:
               
chr15:44051272-44051596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
275, 75
               

               
Conread position:
               
158-337
               

               
Cow position:
               
chr15:6331814-6331987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
158-408
               

               
Cow position:
               
chr15:17870057-17870299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
179, 105
               

               
Conread position:
               
158-486
               

               
Cow position:
               
chr15:17337587-17337274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
161, 97
               

               
Conread position:
               
158-495
               

               
Cow position:
               
chr15:53716661-53716327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
186, 80
               

               
Conread position:
               
158-499
               

               
Cow position:
               
chr15:1857956-1857617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
158-499
               

               
Cow position:
               
chr15:4418172-4418512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
158-499
               

               
Cow position:
               
chr15:9648476-9648799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
158-503
               

               
Cow position:
               
chr15:28823590-28823927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
159-307
               

               
Cow position:
               
chr15:36724952-36725096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
160-499
               

               
Cow position:
               
chr15:1503131-1502802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
160-506
               

               
Cow position:
               
chr15:2380583-2380246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
88, 149
               

               
Conread position:
               
160-506
               

               
Cow position:
               
chr15:49274178-49273838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 97
               

               
Conread position:
               
161-504
               

               
Cow position:
               
chr15:24981967-24982297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
154, 83
               

               
Conread position:
               
163-506
               

               
Cow position:
               
chr15:18018147-18017808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
237, 93
               

               
Conread position:
               
164-499
               

               
Cow position:
               
chr15:33693140-33693483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
181, 89
               

               
Conread position:
               
165-502
               

               
Cow position:
               
chr15:48851268-48851607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
166-523
               

               
Cow position:
               
chr15:10231521-10231878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
167-396
               

               
Cow position:
               
chr15:39436440-39436215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 132
               

               
Conread position:
               
167-487
               

               
Cow position:
               
chr15:40379431-40379113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
254, 99
               

               
Conread position:
               
167-504
               

               
Cow position:
               
chr15:30470750-30471094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 85
               

               
Conread position:
               
168-489
               

               
Cow position:
               
chr15:26573597-26573297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
169-419
               

               
Cow position:
               
chr15:28258239-28258483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
169-446
               

               
Cow position:
               
chr15:9781684-9781415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
171-490
               

               
Cow position:
               
chr15:51307464-51307772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
107, 84
               

               
Conread position:
               
171-499
               

               
Cow position:
               
chr15:33178209-33178537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
172-500
               

               
Cow position:
               
chr15:39326297-39326611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
175-420
               

               
Cow position:
               
chr15:41418620-41418856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
218, 80
               

               
Conread position:
               
175-425
               

               
Cow position:
               
chr15:5930104-5929865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
175-490
               

               
Cow position:
               
chr15:16927886-16928191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
252, 44
               

               
Conread position:
               
175-498
               

               
Cow position:
               
chr15:5158586-5158261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
175-499
               

               
Cow position:
               
chr15:5683352-5683027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
197, 82
               

               
Conread position:
               
175-499
               

               
Cow position:
               
chr15:34284200-34284518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 58
               

               
Conread position:
               
178-425
               

               
Cow position:
               
chr15:10563297-10563537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
178-425
               

               
Cow position:
               
chr15:35204941-35205184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
163, 11
               

               
Conread position:
               
179-506
               

               
Cow position:
               
chr15:5717917-5717604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
180-378
               

               
Cow position:
               
chr15:16448892-16448699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
181-304
               

               
Cow position:
               
chr15:29861530-29861407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
181-486
               

               
Cow position:
               
chr15:9465883-9465576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
253, 96
               

               
Conread position:
               
181-499
               

               
Cow position:
               
chr15:43114517-43114829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
181-501
               

               
Cow position:
               
chr15:52317263-52316948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
181-509
               

               
Cow position:
               
chr15:35425607-35425912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
182-391
               

               
Cow position:
               
chr15:12359240-12359036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
159, 75
               

               
Conread position:
               
182-490
               

               
Cow position:
               
chr15:31928694-31929000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 61
               

               
Conread position:
               
182-499
               

               
Cow position:
               
chr15:6232811-6233126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
171, 72
               

               
Conread position:
               
183-506
               

               
Cow position:
               
chr15:36643653-36643962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
249, 24
               

               
Conread position:
               
187-504
               

               
Cow position:
               
chr15:19950673-19950370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
188-432
               

               
Cow position:
               
chr15:21166218-21166465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
53, 69
               

               
Conread position:
               
188-489
               

               
Cow position:
               
chr15:8665393-8665708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
188-507
               

               
Cow position:
               
chr15:23779873-23780188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
233, 60
               

               
Conread position:
               
189-478
               

               
Cow position:
               
chr15:38935605-38935314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
225, 66
               

               
Conread position:
               
189-484
               

               
Cow position:
               
chr15:14888443-14888733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 146
               

               
Conread position:
               
190-489
               

               
Cow position:
               
chr15:4918870-4919171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
190-523
               

               
Cow position:
               
chr15:14740487-14740820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 69
               

               
Conread position:
               
191-508
               

               
Cow position:
               
chr15:36793297-36793612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
194-432
               

               
Cow position:
               
chr15:12843-12609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
195-425
               

               
Cow position:
               
chr15:35440884-35441110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
196-489
               

               
Cow position:
               
chr15:28047564-28047862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
159, 54
               

               
Conread position:
               
205-419
               

               
Cow position:
               
chr15:29542062-29541852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 127
               

               
Conread position:
               
205-425
               

               
Cow position:
               
chr15:5044301-5044507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
205-507
               

               
Cow position:
               
chr15:29686734-29686445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
206-489
               

               
Cow position:
               
chr15:25350146-25349873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
206-517
               

               
Cow position:
               
chr15:39286232-39286539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
221, 42
               

               
Conread position:
               
207-509
               

               
Cow position:
               
chr15:20722809-20723103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
214, 43
               

               
Conread position:
               
208-451
               

               
Cow position:
               
chr15:21821167-21820932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 46
               

               
Conread position:
               
208-489
               

               
Cow position:
               
chr15:50552350-50552635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
208-490
               

               
Cow position:
               
chr15:4508327-4508067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
215-423
               

               
Cow position:
               
chr15:16908603-16908403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
216-490
               

               
Cow position:
               
chr15:41527806-41528068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
204, 41
               

               
Conread position:
               
217-488
               

               
Cow position:
               
chr15:41624717-41624997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
219-501
               

               
Cow position:
               
chr15:14988157-14987883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
219-504
               

               
Cow position:
               
chr15:41056037-41056325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
223-489
               

               
Cow position:
               
chr15:38859965-38860233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
223-490
               

               
Cow position:
               
chr15:31043032-31042780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
223-499
               

               
Cow position:
               
chr15:4076488-4076220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
224-425
               

               
Cow position:
               
chr15:9497337-9497532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
224-433
               

               
Cow position:
               
chr15:6427468-6427670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
224-436
               

               
Cow position:
               
chr15:14176337-14176542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
227-461
               

               
Cow position:
               
chr15:32977685-32977911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
229-507
               

               
Cow position:
               
chr15:4694903-4694634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
230-424
               

               
Cow position:
               
chr15:6272731-6272918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
230-499
               

               
Cow position:
               
chr15:36952043-36952308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
231-506
               

               
Cow position:
               
chr15:38827169-38827431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
231-522
               

               
Cow position:
               
chr15:3695790-3695503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
194, 101
               

               
Conread position:
               
232-506
               

               
Cow position:
               
chr15:15177469-15177202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
236-501
               

               
Cow position:
               
chr15:19553772-19554039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
240-433
               

               
Cow position:
               
chr15:31025138-31024953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
246-500
               

               
Cow position:
               
chr15:1284415-1284150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
140, 86
               

               
Conread position:
               
248-461
               

               
Cow position:
               
chr15:41583021-41582816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
254-498
               

               
Cow position:
               
chr15:20950385-20950142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
257-432
               

               
Cow position:
               
chr15:44280233-44280063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
257-489
               

               
Cow position:
               
chr15:19942723-19942496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
158, 9
               

               
Conread position:
               
257-499
               

               
Cow position:
               
chr15:14281682-14281425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
257-499
               

               
Cow position:
               
chr15:20856344-20856590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
167, 75
               

               
Conread position:
               
257-516
               

               
Cow position:
               
chr15:26158466-26158728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
258-491
               

               
Cow position:
               
chr15:26851093-26851327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
258-501
               

               
Cow position:
               
chr15:15154431-15154184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
165, 74
               

               
Conread position:
               
259-490
               

               
Cow position:
               
chr15:31637432-31637193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
259-499
               

               
Cow position:
               
chr15:36388421-36388188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
260-454
               

               
Cow position:
               
chr15:52878403-52878217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
260-490
               

               
Cow position:
               
chr15:10880757-10880983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
260-506
               

               
Cow position:
               
chr15:6037326-6037563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
262-425
               

               
Cow position:
               
chr15:39520296-39520136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
263-418
               

               
Cow position:
               
chr15:23719357-23719508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
265-506
               

               
Cow position:
               
chr15:50333101-50332857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
156, 5
               

               
Conread position:
               
267-500
               

               
Cow position:
               
chr15:38652479-38652715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
156, 65
               

               
Conread position:
               
269-489
               

               
Cow position:
               
chr15:50675033-50674813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
270-474
               

               
Cow position:
               
chr15:50660743-50660544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
270-500
               

               
Cow position:
               
chr15:31495105-31495330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
271-490
               

               
Cow position:
               
chr15:864295-864076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
150, 16
               

               
Conread position:
               
271-499
               

               
Cow position:
               
chr15:15025285-15025056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
37, 119
               

               
Conread position:
               
272-423
               

               
Cow position:
               
chr15:14261142-14261287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
272-519
               

               
Cow position:
               
chr15:21903293-21903533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
273-485
               

               
Cow position:
               
chr15:27063405-27063614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
274-482
               

               
Cow position:
               
chr15:7955957-7956173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
108, 113
               

               
Conread position:
               
277-502
               

               
Cow position:
               
chr15:26442327-26442100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
278-498
               

               
Cow position:
               
chr15:49784174-49784391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
278-505
               

               
Cow position:
               
chr15:4248259-4248029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 38
               

               
Conread position:
               
279-499
               

               
Cow position:
               
chr15:22443878-22444098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
279-506
               

               
Cow position:
               
chr15:26530000-26529778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
280-433
               

               
Cow position:
               
chr15:18776642-18776791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
282-517
               

               
Cow position:
               
chr15:39473828-39474064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
283-504
               

               
Cow position:
               
chr15:19002170-19002398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
283-506
               

               
Cow position:
               
chr15:13669757-13669966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
204, 19
               

               
Conread position:
               
287-499
               

               
Cow position:
               
chr15:2931458-2931680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
297-485
               

               
Cow position:
               
chr15:41534742-41534557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
175, 35
               

               
Conread position:
               
305-500
               

               
Cow position:
               
chr15:43633946-43634142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
310-486
               

               
Cow position:
               
chr15:52629041-52629214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
311-490
               

               
Cow position:
               
chr15:52792015-52791838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
314-487
               

               
Cow position:
               
chr15:48052529-48052697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
314-490
               

               
Cow position:
               
chr15:4500778-4500596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
116, 18
               

               
Conread position:
               
314-499
               

               
Cow position:
               
chr15:16230297-16230118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
314-506
               

               
Cow position:
               
chr15:41320878-41321069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 18
               

               
Conread position:
               
315-490
               

               
Cow position:
               
chr15:27975794-27975975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
319-500
               

               
Cow position:
               
chr15:848717-848535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 152
               

               
Conread position:
               
319-507
               

               
Cow position:
               
chr15:840075-840265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
320-517
               

               
Cow position:
               
chr15:38196007-38196209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
323-489
               

               
Cow position:
               
chr15:18942100-18941933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
323-498
               

               
Cow position:
               
chr15:5710472-5710304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
326-505
               

               
Cow position:
               
chr15:12314626-12314447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
334-488
               

               
Cow position:
               
chr15:36457565-36457717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
334-495
               

               
Cow position:
               
chr15:5691160-5690995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
335-499
               

               
Cow position:
               
chr15:50350905-50350732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
336-489
               

               
Cow position:
               
chr15:34223923-34223766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
336-490
               

               
Cow position:
               
chr15:12913441-12913601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
336-490
               

               
Cow position:
               
chr15:14964110-14964262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
336-490
               

               
Cow position:
               
chr15:40000978-40000824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 91
               

               
Conread position:
               
336-491
               

               
Cow position:
               
chr15:18703878-18704036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
336-493
               

               
Cow position:
               
chr15:38820755-38820597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
336-494
               

               
Cow position:
               
chr15:20047643-20047497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
336-499
               

               
Cow position:
               
chr15:28099169-28099002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
80, 138
               

               
Conread position:
               
336-499
               

               
Cow position:
               
chr15:40835170-40835005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 156
               

               
Conread position:
               
336-499
               

               
Cow position:
               
chr15:41475773-41475937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 156
               

               
Conread position:
               
336-499
               

               
Cow position:
               
chr15:47773435-47773591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
336-501
               

               
Cow position:
               
chr15:13846511-13846678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
336-503
               

               
Cow position:
               
chr15:8331145-8331311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 112
               

               
Conread position:
               
336-506
               

               
Cow position:
               
chr15:26849480-26849649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
336-506
               

               
Cow position:
               
chr15:33897881-33897705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
336-507
               

               
Cow position:
               
chr15:40844563-40844744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
336-509
               

               
Cow position:
               
chr15:49483685-49483505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
339-501
               

               
Cow position:
               
chr15:11908894-11909061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
339-504
               

               
Cow position:
               
chr15:20566969-20566801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
339-506
               

               
Cow position:
               
chr15:43715380-43715212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
340-486
               

               
Cow position:
               
chr15:10049256-10049412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
340-489
               

               
Cow position:
               
chr15:40562629-40562784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
340-499
               

               
Cow position:
               
chr15:49230264-49230424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 62
               

               
Conread position:
               
340-500
               

               
Cow position:
               
chr15:12045484-12045651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 158
               

               
Conread position:
               
340-500
               

               
Cow position:
               
chr15:44119414-44119581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
340-506
               

               
Cow position:
               
chr15:48819098-48818935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
347-503
               

               
Cow position:
               
chr15:53005893-53006048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
72, 136
               

               
Conread position:
               
348-506
               

               
Cow position:
               
chr15:10199375-10199213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
354-489
               

               
Cow position:
               
chr15:20905993-20906130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
355-490
               

               
Cow position:
               
chr15:14969551-14969416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 64
               

               
Conread position:
               
355-514
               

               
Cow position:
               
chr15:41049424-41049583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
357-495
               

               
Cow position:
               
chr15:49421958-49422089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
361-504
               

               
Cow position:
               
chr15:9128639-9128785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 85
               

               
Conread position:
               
363-501
               

               
Cow position:
               
chr15:49959561-49959425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 102
               

               
Conread position:
               
366-484
               

               
Cow position:
               
chr15:14572701-14572584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
366-486
               

               
Cow position:
               
chr15:37637467-37637349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
367-499
               

               
Cow position:
               
chr15:28206135-28206003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
56, 124
               

               
Conread position:
               
367-522
               

               
Cow position:
               
chr15:906617-906774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
370-499
               

               
Cow position:
               
chr15:51558425-51558293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
372-488
               

               
Cow position:
               
chr15:11635433-11635317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
379-490
               

               
Cow position:
               
chr15:6219811-6219923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 14
               
Show alignments to all cow chromosomes.