• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_007632.5
        

               
Conread position:
               
106-506
               

               
Cow position:
               
chr27:30260748-30261146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
112-500
               

               
Cow position:
               
chr27:7614945-7615314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
118-490
               

               
Cow position:
               
chr27:3306904-3306551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
126-491
               

               
Cow position:
               
chr27:22330540-22330894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 127
               

               
Conread position:
               
127-489
               

               
Cow position:
               
chr27:30765164-30764799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 6
               

               
Conread position:
               
127-490
               

               
Cow position:
               
chr27:13005962-13005633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
127-499
               

               
Cow position:
               
chr27:8962136-8962484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
181, 6
               

               
Conread position:
               
127-499
               

               
Cow position:
               
chr27:15867524-15867149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 6
               

               
Conread position:
               
127-506
               

               
Cow position:
               
chr27:19647814-19648188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
128-484
               

               
Cow position:
               
chr27:27694646-27695004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
34, 39
               

               
Conread position:
               
131-363
               

               
Cow position:
               
chr27:20789254-20789482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
140, 98
               

               
Conread position:
               
132-499
               

               
Cow position:
               
chr27:26481084-26481440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
133-499
               

               
Cow position:
               
chr27:29493789-29494142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
136-404
               

               
Cow position:
               
chr27:715621-715357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
51, 121
               

               
Conread position:
               
137-416
               

               
Cow position:
               
chr27:24371352-24371087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
139-395
               

               
Cow position:
               
chr27:16626013-16625765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
140-417
               

               
Cow position:
               
chr27:11273693-11273419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 106
               

               
Conread position:
               
140-441
               

               
Cow position:
               
chr27:8405714-8405998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
140-488
               

               
Cow position:
               
chr27:18507756-18507412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
140-499
               

               
Cow position:
               
chr27:20748896-20749246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
141-255
               

               
Cow position:
               
chr27:16620101-16619985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
141-270
               

               
Cow position:
               
chr27:22498670-22498542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
141-270
               

               
Cow position:
               
chr27:23455037-23455171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
141-286
               

               
Cow position:
               
chr27:19577788-19577642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
141-288
               

               
Cow position:
               
chr27:27550634-27550773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
141-291
               

               
Cow position:
               
chr27:20592097-20591945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
141-297
               

               
Cow position:
               
chr27:16238018-16237868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
141-299
               

               
Cow position:
               
chr27:6058612-6058461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
141-299
               

               
Cow position:
               
chr27:24559331-24559492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
141-299
               

               
Cow position:
               
chr27:26398149-26398301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
141-303
               

               
Cow position:
               
chr27:30670851-30670693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
141-306
               

               
Cow position:
               
chr27:10395148-10395309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr27:4011792-4011628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
48, 111
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr27:22268614-22268450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr27:27259722-27259563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
141-308
               

               
Cow position:
               
chr27:27141707-27141550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
141-310
               

               
Cow position:
               
chr27:30843962-30844132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 78
               

               
Conread position:
               
141-320
               

               
Cow position:
               
chr27:14902539-14902717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
141-326
               

               
Cow position:
               
chr27:29283295-29283478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
141-327
               

               
Cow position:
               
chr27:6523154-6522973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
141-327
               

               
Cow position:
               
chr27:21569730-21569911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr27:9090692-9090870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr27:25676338-25676157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr27:26141885-26141698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr27:27040721-27040530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
141-329
               

               
Cow position:
               
chr27:6350716-6350913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
141-329
               

               
Cow position:
               
chr27:23070250-23070432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
141-381
               

               
Cow position:
               
chr27:707064-706832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
123, 114
               

               
Conread position:
               
141-383
               

               
Cow position:
               
chr27:25380104-25379865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
131, 15
               

               
Conread position:
               
141-386
               

               
Cow position:
               
chr27:15871276-15871035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
141-388
               

               
Cow position:
               
chr27:30672450-30672686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 110
               

               
Conread position:
               
141-396
               

               
Cow position:
               
chr27:30551110-30550854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
224, 188
               

               
Conread position:
               
141-402
               

               
Cow position:
               
chr27:1058570-1058817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
141-404
               

               
Cow position:
               
chr27:27843883-27844146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 54
               

               
Conread position:
               
141-407
               

               
Cow position:
               
chr27:24014627-24014886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 84
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr27:1123144-1122884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr27:18593380-18593125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr27:24321299-24321042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr27:26151133-26150870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
131, 8
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr27:30354230-30354492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
141-415
               

               
Cow position:
               
chr27:1498430-1498160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
241, 174
               

               
Conread position:
               
141-416
               

               
Cow position:
               
chr27:20037013-20037270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
131, 80
               

               
Conread position:
               
141-416
               

               
Cow position:
               
chr27:20641228-20641489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
114, 71
               

               
Conread position:
               
141-417
               

               
Cow position:
               
chr27:21452960-21453252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
43, 210
               

               
Conread position:
               
141-418
               

               
Cow position:
               
chr27:7212604-7212871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 56
               

               
Conread position:
               
141-420
               

               
Cow position:
               
chr27:536572-536304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
138, 68
               

               
Conread position:
               
141-420
               

               
Cow position:
               
chr27:20549595-20549871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
131, 80
               

               
Conread position:
               
141-421
               

               
Cow position:
               
chr27:6074034-6073770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 106
               

               
Conread position:
               
141-421
               

               
Cow position:
               
chr27:15319560-15319298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
141-423
               

               
Cow position:
               
chr27:23472365-23472097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
247, 79
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chr27:4385951-4386225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chr27:27064330-27064603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr27:12246768-12246490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
141-425
               

               
Cow position:
               
chr27:27640882-27641175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
37, 206
               

               
Conread position:
               
141-426
               

               
Cow position:
               
chr27:20901675-20901395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
141-426
               

               
Cow position:
               
chr27:30389183-30389464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr27:20795900-20795621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr27:23882264-23882539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
45, 116
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr27:25277254-25276972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 104
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr27:27270429-27270713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr27:30988907-30988626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
141-433
               

               
Cow position:
               
chr27:30359517-30359234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
141-436
               

               
Cow position:
               
chr27:27136406-27136696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
273, 114
               

               
Conread position:
               
141-439
               

               
Cow position:
               
chr27:22454664-22454955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
141-439
               

               
Cow position:
               
chr27:28245914-28245623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
141-443
               

               
Cow position:
               
chr27:27003163-27003441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
141-445
               

               
Cow position:
               
chr27:26959505-26959804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
137, 104
               

               
Conread position:
               
141-451
               

               
Cow position:
               
chr27:4812767-4813078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
131, 108
               

               
Conread position:
               
141-453
               

               
Cow position:
               
chr27:22418655-22418962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
141-454
               

               
Cow position:
               
chr27:15866337-15866020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
141-458
               

               
Cow position:
               
chr27:26919789-26920113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
141-460
               

               
Cow position:
               
chr27:23632711-23632395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
141-461
               

               
Cow position:
               
chr27:28164293-28164608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
141-467
               

               
Cow position:
               
chr27:1768514-1768834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 41
               

               
Conread position:
               
141-468
               

               
Cow position:
               
chr27:15643285-15642967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
141-476
               

               
Cow position:
               
chr27:20067865-20068196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
121, 76
               

               
Conread position:
               
141-482
               

               
Cow position:
               
chr27:23891052-23890706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
141-484
               

               
Cow position:
               
chr27:19685599-19685939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
141-485
               

               
Cow position:
               
chr27:13317845-13318207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 205
               

               
Conread position:
               
141-486
               

               
Cow position:
               
chr27:23554210-23554560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr27:20045999-20045664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr27:24227680-24228036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr27:24446045-24446370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
125, 72
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr27:26509047-26509388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr27:26999306-26999655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr27:28931678-28932034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 112
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr27:31230980-31231311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
281, 68
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr27:16284582-16284256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 91
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr27:23545207-23545571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 117
               

               
Conread position:
               
141-488
               

               
Cow position:
               
chr27:28921787-28922128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 15
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr27:22440250-22439903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr27:26428019-26428362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr27:29184726-29185079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
257, 23
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr27:29816512-29816863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr27:30374459-30374816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr27:30582854-30582506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 196
               

               
Conread position:
               
141-489
               

               
Cow position:
               
chr27:31372866-31373206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr27:299274-299609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 33
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr27:2957514-2957182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr27:15408930-15409260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 58
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr27:16103917-16103576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 17
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr27:16705360-16705018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr27:19388127-19387786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 105
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr27:22603284-22602940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr27:27388911-27389262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr27:27460462-27460813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
141-491
               

               
Cow position:
               
chr27:7412492-7412158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 57
               

               
Conread position:
               
141-491
               

               
Cow position:
               
chr27:19589585-19589247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
141-491
               

               
Cow position:
               
chr27:26424475-26424812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
141-495
               

               
Cow position:
               
chr27:28518403-28518053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
141-498
               

               
Cow position:
               
chr27:26440947-26441272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr27:2592660-2592293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr27:6541742-6541391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 116
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr27:7649475-7649837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr27:10979973-10979616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr27:14343353-14343679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 114
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr27:19896866-19896517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
272, 51
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr27:24477526-24477183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr27:27019989-27020339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 162
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr27:27245240-27245608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
147, 104
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr27:28206907-28206561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
113, 64
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr27:30868629-30868995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 55
               

               
Conread position:
               
141-499
               

               
Cow position:
               
chr27:30871946-30872301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 87
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr27:4390145-4390502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
196, 14
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr27:11435211-11435572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr27:29038831-29039166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
103, 8
               

               
Conread position:
               
141-501
               

               
Cow position:
               
chr27:427082-426724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 107
               

               
Conread position:
               
141-503
               

               
Cow position:
               
chr27:27442057-27442410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr27:17331612-17331244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 176
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr27:17397337-17397699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr27:20354694-20354350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 11
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr27:22547295-22547636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
141-505
               

               
Cow position:
               
chr27:21669011-21669360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
179, 12
               

               
Conread position:
               
141-505
               

               
Cow position:
               
chr27:28018446-28018074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr27:1353703-1353325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr27:6788069-6787701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr27:8168316-8168671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr27:8430331-8430670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr27:13252119-13251777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
234, 104
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr27:14670271-14670630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
86, 118
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr27:19500121-19500486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
41, 117
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr27:22035264-22035625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
131, 83
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr27:22171413-22171053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 114
               

               
Conread position:
               
141-506
               

               
Cow position:
               
chr27:28190104-28190442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr27:15454321-15453961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
108, 21
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr27:19543792-19544153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 129
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr27:20552647-20553027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
141-507
               

               
Cow position:
               
chr27:30915119-30914755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 45
               

               
Conread position:
               
141-508
               

               
Cow position:
               
chr27:22220663-22220297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 45
               

               
Conread position:
               
141-509
               

               
Cow position:
               
chr27:4835498-4835851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
261, 63
               

               
Conread position:
               
141-509
               

               
Cow position:
               
chr27:26865007-26865362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
282, 97
               

               
Conread position:
               
141-514
               

               
Cow position:
               
chr27:29431570-29431211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
350, 72
               

               
Conread position:
               
141-523
               

               
Cow position:
               
chr27:8353586-8353229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
336, 72
               

               
Conread position:
               
141-526
               

               
Cow position:
               
chr27:10992467-10992104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
142-265
               

               
Cow position:
               
chr27:29399929-29399805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 108
               

               
Conread position:
               
142-294
               

               
Cow position:
               
chr27:28038229-28038379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
122, 108
               

               
Conread position:
               
142-328
               

               
Cow position:
               
chr27:8048628-8048812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
142-371
               

               
Cow position:
               
chr27:24999626-24999851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
142-400
               

               
Cow position:
               
chr27:4829691-4829952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
112, 64
               

               
Conread position:
               
142-404
               

               
Cow position:
               
chr27:9169532-9169783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
142-416
               

               
Cow position:
               
chr27:26581323-26581592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 127
               

               
Conread position:
               
142-423
               

               
Cow position:
               
chr27:8942571-8942852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
142-425
               

               
Cow position:
               
chr27:7731136-7731420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
43, 128
               

               
Conread position:
               
142-428
               

               
Cow position:
               
chr27:19718034-19717747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
142-433
               

               
Cow position:
               
chr27:22569884-22569612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
142-433
               

               
Cow position:
               
chr27:26413141-26413427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 108
               

               
Conread position:
               
142-443
               

               
Cow position:
               
chr27:28271034-28271333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
142-463
               

               
Cow position:
               
chr27:26807451-26807767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
159, 108
               

               
Conread position:
               
142-481
               

               
Cow position:
               
chr27:26239137-26238798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
130, 81
               

               
Conread position:
               
142-487
               

               
Cow position:
               
chr27:12596877-12596550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
142-487
               

               
Cow position:
               
chr27:21393386-21393725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
142-488
               

               
Cow position:
               
chr27:7971682-7971328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 146
               

               
Conread position:
               
142-489
               

               
Cow position:
               
chr27:20636957-20637292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
272, 11
               

               
Conread position:
               
142-490
               

               
Cow position:
               
chr27:11480517-11480873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 110
               

               
Conread position:
               
142-499
               

               
Cow position:
               
chr27:17472925-17472570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
42, 112
               

               
Conread position:
               
142-501
               

               
Cow position:
               
chr27:10582477-10582123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
142-501
               

               
Cow position:
               
chr27:26226178-26226532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
142-504
               

               
Cow position:
               
chr27:6550569-6550213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
142-507
               

               
Cow position:
               
chr27:25809402-25809766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
142-509
               

               
Cow position:
               
chr27:13411246-13411623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
21, 199
               

               
Conread position:
               
143-370
               

               
Cow position:
               
chr27:11535989-11536215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
143-379
               

               
Cow position:
               
chr27:11151787-11151550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 191
               

               
Conread position:
               
143-386
               

               
Cow position:
               
chr27:21408445-21408689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 196
               

               
Conread position:
               
143-422
               

               
Cow position:
               
chr27:27038728-27038999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
143-424
               

               
Cow position:
               
chr27:815477-815193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
120, 111
               

               
Conread position:
               
143-425
               

               
Cow position:
               
chr27:28467331-28467613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
24, 115
               

               
Conread position:
               
143-425
               

               
Cow position:
               
chr27:31148871-31148597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
143-487
               

               
Cow position:
               
chr27:6500172-6499826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
143-489
               

               
Cow position:
               
chr27:13875842-13875499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 112
               

               
Conread position:
               
143-490
               

               
Cow position:
               
chr27:21978025-21978378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr27:27204306-27204680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 209
               

               
Conread position:
               
143-500
               

               
Cow position:
               
chr27:12516306-12515949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
47, 104
               

               
Conread position:
               
143-500
               

               
Cow position:
               
chr27:27438393-27438753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 110
               

               
Conread position:
               
143-516
               

               
Cow position:
               
chr27:18558471-18558097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
143-517
               

               
Cow position:
               
chr27:18030949-18031331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
144-375
               

               
Cow position:
               
chr27:12429513-12429292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
144-507
               

               
Cow position:
               
chr27:7346774-7346418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
144-542
               

               
Cow position:
               
chr27:15668660-15669063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 131
               

               
Conread position:
               
145-306
               

               
Cow position:
               
chr27:154474-154313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
126, 105
               

               
Conread position:
               
145-327
               

               
Cow position:
               
chr27:7537967-7538148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
145-331
               

               
Cow position:
               
chr27:30362349-30362172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
180, 13
               

               
Conread position:
               
145-486
               

               
Cow position:
               
chr27:26489796-26490136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 105
               

               
Conread position:
               
145-488
               

               
Cow position:
               
chr27:29380967-29380628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
145-489
               

               
Cow position:
               
chr27:16786932-16786597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
145-506
               

               
Cow position:
               
chr27:30406929-30407297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
145-506
               

               
Cow position:
               
chr27:30890396-30890050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
278, 110
               

               
Conread position:
               
146-425
               

               
Cow position:
               
chr27:4673127-4672847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
123, 109
               

               
Conread position:
               
146-486
               

               
Cow position:
               
chr27:19661048-19660697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 116
               

               
Conread position:
               
146-505
               

               
Cow position:
               
chr27:21991263-21990890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
147-489
               

               
Cow position:
               
chr27:1636836-1637160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
147-489
               

               
Cow position:
               
chr27:18646040-18646383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
147-490
               

               
Cow position:
               
chr27:19546399-19546756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
79, 157
               

               
Conread position:
               
148-307
               

               
Cow position:
               
chr27:20570228-20570069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
30, 103
               

               
Conread position:
               
148-379
               

               
Cow position:
               
chr27:22426722-22426951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 112
               

               
Conread position:
               
148-423
               

               
Cow position:
               
chr27:12191383-12191642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
148-489
               

               
Cow position:
               
chr27:4858540-4858853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
150-507
               

               
Cow position:
               
chr27:23930076-23929726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
151-499
               

               
Cow position:
               
chr27:16965677-16965331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
152-490
               

               
Cow position:
               
chr27:27632508-27632828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
261, 48
               

               
Conread position:
               
152-500
               

               
Cow position:
               
chr27:28001708-28002048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
152-504
               

               
Cow position:
               
chr27:20283744-20283394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 95
               

               
Conread position:
               
153-319
               

               
Cow position:
               
chr27:26135238-26135074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 9
               

               
Conread position:
               
153-409
               

               
Cow position:
               
chr27:20497315-20497057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 107
               

               
Conread position:
               
153-467
               

               
Cow position:
               
chr27:17994841-17995158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
153-469
               

               
Cow position:
               
chr27:26218808-26218507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
153-489
               

               
Cow position:
               
chr27:18544100-18543754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
153-499
               

               
Cow position:
               
chr27:10307197-10307545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
153-499
               

               
Cow position:
               
chr27:15925445-15925099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
153-499
               

               
Cow position:
               
chr27:22386971-22386646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
119, 104
               

               
Conread position:
               
153-499
               

               
Cow position:
               
chr27:23594417-23594077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
120, 67
               

               
Conread position:
               
153-499
               

               
Cow position:
               
chr27:30814515-30814173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
153-506
               

               
Cow position:
               
chr27:29236682-29236306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
120, 97
               

               
Conread position:
               
153-508
               

               
Cow position:
               
chr27:29504546-29504886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
153-520
               

               
Cow position:
               
chr27:23128561-23128202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
154-444
               

               
Cow position:
               
chr27:8263235-8263522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
154-486
               

               
Cow position:
               
chr27:435335-435001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
98, 86
               

               
Conread position:
               
155-330
               

               
Cow position:
               
chr27:2683043-2683219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
155-483
               

               
Cow position:
               
chr27:27554583-27554908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
155-488
               

               
Cow position:
               
chr27:29831588-29831941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
32, 132
               

               
Conread position:
               
155-489
               

               
Cow position:
               
chr27:24331824-24331480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
24, 119
               

               
Conread position:
               
155-501
               

               
Cow position:
               
chr27:20828613-20828951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
156-485
               

               
Cow position:
               
chr27:26188919-26188597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
158-491
               

               
Cow position:
               
chr27:22559725-22560062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
158-506
               

               
Cow position:
               
chr27:7935059-7935411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
158-511
               

               
Cow position:
               
chr27:23736058-23735714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
159-307
               

               
Cow position:
               
chr27:4482762-4482907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
159-417
               

               
Cow position:
               
chr27:673949-674187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
159-478
               

               
Cow position:
               
chr27:23483320-23483008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
159-506
               

               
Cow position:
               
chr27:20092743-20093063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
160-488
               

               
Cow position:
               
chr27:15315603-15315290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
160-490
               

               
Cow position:
               
chr27:15378386-15378716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
113, 13
               

               
Conread position:
               
160-499
               

               
Cow position:
               
chr27:26643772-26643459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
160-499
               

               
Cow position:
               
chr27:28896969-28896634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
160-504
               

               
Cow position:
               
chr27:23511084-23510727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
113, 95
               

               
Conread position:
               
161-417
               

               
Cow position:
               
chr27:24509910-24509662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
164-496
               

               
Cow position:
               
chr27:15865696-15865369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
166-370
               

               
Cow position:
               
chr27:20055883-20056078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
185, 9
               

               
Conread position:
               
166-506
               

               
Cow position:
               
chr27:16780956-16780611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 80
               

               
Conread position:
               
167-486
               

               
Cow position:
               
chr27:22489365-22489041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
112, 80
               

               
Conread position:
               
168-489
               

               
Cow position:
               
chr27:6241102-6241426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
170-408
               

               
Cow position:
               
chr27:26407080-26407307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
172-375
               

               
Cow position:
               
chr27:20247725-20247919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
173-488
               

               
Cow position:
               
chr27:29593552-29593861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
252, 37
               

               
Conread position:
               
175-423
               

               
Cow position:
               
chr27:16088888-16088642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 97
               

               
Conread position:
               
175-436
               

               
Cow position:
               
chr27:15215312-15215051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
176-416
               

               
Cow position:
               
chr27:24738713-24738955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 161
               

               
Conread position:
               
176-489
               

               
Cow position:
               
chr27:6925167-6924848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
176-489
               

               
Cow position:
               
chr27:31151455-31151150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
242, 63
               

               
Conread position:
               
178-432
               

               
Cow position:
               
chr27:1290776-1291020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
179-466
               

               
Cow position:
               
chr27:24939979-24939684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 249
               

               
Conread position:
               
180-307
               

               
Cow position:
               
chr27:1565352-1565477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
180-328
               

               
Cow position:
               
chr27:26979634-26979784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
181-501
               

               
Cow position:
               
chr27:4944445-4944751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
183-489
               

               
Cow position:
               
chr27:2644014-2644332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
184-425
               

               
Cow position:
               
chr27:31017764-31017990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
184-435
               

               
Cow position:
               
chr27:4156072-4155823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 151
               

               
Conread position:
               
185-419
               

               
Cow position:
               
chr27:26013305-26013532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
185-499
               

               
Cow position:
               
chr27:22225526-22225813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
187-490
               

               
Cow position:
               
chr27:23452526-23452228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
234, 72
               

               
Conread position:
               
188-420
               

               
Cow position:
               
chr27:7974240-7974017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
188-499
               

               
Cow position:
               
chr27:20514887-20514581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
188-501
               

               
Cow position:
               
chr27:26111843-26112162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
79, 124
               

               
Conread position:
               
189-329
               

               
Cow position:
               
chr27:26785925-26786063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
191-499
               

               
Cow position:
               
chr27:590704-591015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
191-509
               

               
Cow position:
               
chr27:26984412-26984100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
192-391
               

               
Cow position:
               
chr27:21976111-21975922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
192-432
               

               
Cow position:
               
chr27:6302401-6302639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
192-461
               

               
Cow position:
               
chr27:20812967-20812709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
251, 48
               

               
Conread position:
               
192-493
               

               
Cow position:
               
chr27:28260477-28260772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
231, 41
               

               
Conread position:
               
192-499
               

               
Cow position:
               
chr27:17646111-17646396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
192-506
               

               
Cow position:
               
chr27:8062292-8062602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
221, 56
               

               
Conread position:
               
192-506
               

               
Cow position:
               
chr27:23559969-23560280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
197-435
               

               
Cow position:
               
chr27:20584399-20584628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
199-331
               

               
Cow position:
               
chr27:24113257-24113123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
202-327
               

               
Cow position:
               
chr27:4486572-4486696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
202-486
               

               
Cow position:
               
chr27:23860221-23859932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
17, 56
               

               
Conread position:
               
207-484
               

               
Cow position:
               
chr27:23107854-23108131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
116, 49
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr27:22423554-22423345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
209-428
               

               
Cow position:
               
chr27:20803612-20803826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
209-490
               

               
Cow position:
               
chr27:23485258-23484981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
209-499
               

               
Cow position:
               
chr27:26852547-26852826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
229, 48
               

               
Conread position:
               
213-425
               

               
Cow position:
               
chr27:17918274-17918478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
213-484
               

               
Cow position:
               
chr27:10653727-10653453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
214-487
               

               
Cow position:
               
chr27:12459321-12459056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
216, 22
               

               
Conread position:
               
215-487
               

               
Cow position:
               
chr27:5553510-5553240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 107
               

               
Conread position:
               
215-499
               

               
Cow position:
               
chr27:213003-212708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
215-499
               

               
Cow position:
               
chr27:13940520-13940794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
217-516
               

               
Cow position:
               
chr27:12425325-12425024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
194, 14
               

               
Conread position:
               
219-467
               

               
Cow position:
               
chr27:14303769-14303528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
205, 46
               

               
Conread position:
               
220-432
               

               
Cow position:
               
chr27:18922796-18923004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
222-499
               

               
Cow position:
               
chr27:26793756-26794026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
191, 29
               

               
Conread position:
               
223-507
               

               
Cow position:
               
chr27:19933096-19932813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
226-485
               

               
Cow position:
               
chr27:10323870-10323614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
233-490
               

               
Cow position:
               
chr27:25152103-25151854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
191, 24
               

               
Conread position:
               
234-506
               

               
Cow position:
               
chr27:11561796-11561524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
179, 23
               

               
Conread position:
               
239-500
               

               
Cow position:
               
chr27:19509030-19508767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
174, 94
               

               
Conread position:
               
241-489
               

               
Cow position:
               
chr27:26437105-26437354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 92
               

               
Conread position:
               
241-506
               

               
Cow position:
               
chr27:11982635-11982900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
180, 22
               

               
Conread position:
               
257-507
               

               
Cow position:
               
chr27:31004941-31004691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
257-514
               

               
Cow position:
               
chr27:29615053-29614782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
265-506
               

               
Cow position:
               
chr27:31210537-31210300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
168, 31
               

               
Conread position:
               
267-489
               

               
Cow position:
               
chr27:27740302-27740527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
154, 65
               

               
Conread position:
               
269-490
               

               
Cow position:
               
chr27:20897038-20897255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
154, 41
               

               
Conread position:
               
270-432
               

               
Cow position:
               
chr27:30489424-30489582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
270-485
               

               
Cow position:
               
chr27:30455980-30455763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
153, 62
               

               
Conread position:
               
270-490
               

               
Cow position:
               
chr27:16512185-16512402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 62
               

               
Conread position:
               
270-502
               

               
Cow position:
               
chr27:6319905-6319676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
143, 62
               

               
Conread position:
               
270-520
               

               
Cow position:
               
chr27:31386644-31386896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
271-499
               

               
Cow position:
               
chr27:8790755-8790985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
271-499
               

               
Cow position:
               
chr27:22245611-22245396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
136, 61
               

               
Conread position:
               
271-504
               

               
Cow position:
               
chr27:31169125-31169355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
271-506
               

               
Cow position:
               
chr27:29319396-29319152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
150, 61
               

               
Conread position:
               
272-490
               

               
Cow position:
               
chr27:6106684-6106472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
143, 60
               

               
Conread position:
               
273-489
               

               
Cow position:
               
chr27:26121743-26121524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
150, 59
               

               
Conread position:
               
274-498
               

               
Cow position:
               
chr27:27055268-27055053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
276-499
               

               
Cow position:
               
chr27:29388652-29388429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
120, 57
               

               
Conread position:
               
277-508
               

               
Cow position:
               
chr27:15002999-15003231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
278-490
               

               
Cow position:
               
chr27:18435155-18435365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
149, 54
               

               
Conread position:
               
279-506
               

               
Cow position:
               
chr27:15332318-15332539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
288-506
               

               
Cow position:
               
chr27:24223922-24223705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
289-489
               

               
Cow position:
               
chr27:27648350-27648549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
124, 40
               

               
Conread position:
               
289-506
               

               
Cow position:
               
chr27:19452969-19452749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
289-507
               

               
Cow position:
               
chr27:6162443-6162656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
206, 43
               

               
Conread position:
               
292-495
               

               
Cow position:
               
chr27:19557349-19557153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
296-489
               

               
Cow position:
               
chr27:17102856-17102666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
130, 36
               

               
Conread position:
               
302-489
               

               
Cow position:
               
chr27:16246761-16246574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 183
               

               
Conread position:
               
310-489
               

               
Cow position:
               
chr27:26909645-26909822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
113, 22
               

               
Conread position:
               
311-490
               

               
Cow position:
               
chr27:29961634-29961811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
314-497
               

               
Cow position:
               
chr27:22792774-22792597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
314-499
               

               
Cow position:
               
chr27:20048576-20048393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
314-501
               

               
Cow position:
               
chr27:20484672-20484489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
318-461
               

               
Cow position:
               
chr27:18491494-18491352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
322-488
               

               
Cow position:
               
chr27:178801-178630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
326-488
               

               
Cow position:
               
chr27:27528885-27529047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
326-490
               

               
Cow position:
               
chr27:13204394-13204230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
327-507
               

               
Cow position:
               
chr27:11134020-11133838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
94, 167
               

               
Conread position:
               
336-490
               

               
Cow position:
               
chr27:2949403-2949551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
336-490
               

               
Cow position:
               
chr27:11528855-11528694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
336-490
               

               
Cow position:
               
chr27:23495785-23495930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
336-491
               

               
Cow position:
               
chr27:1184253-1184409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 139
               

               
Conread position:
               
336-498
               

               
Cow position:
               
chr27:9253189-9253357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
336-499
               

               
Cow position:
               
chr27:19576399-19576569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
336-499
               

               
Cow position:
               
chr27:22748252-22748086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
75, 158
               

               
Conread position:
               
336-500
               

               
Cow position:
               
chr27:27449961-27450128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
336-501
               

               
Cow position:
               
chr27:28476189-28476354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
87, 77
               

               
Conread position:
               
336-506
               

               
Cow position:
               
chr27:24358257-24358086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
156, 38
               

               
Conread position:
               
336-506
               

               
Cow position:
               
chr27:31153633-31153808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 137
               

               
Conread position:
               
337-490
               

               
Cow position:
               
chr27:1067491-1067341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
337-490
               

               
Cow position:
               
chr27:24693336-24693183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
337-499
               

               
Cow position:
               
chr27:3498474-3498313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
339-504
               

               
Cow position:
               
chr27:10581454-10581286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
340-465
               

               
Cow position:
               
chr27:16336808-16336679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
340-473
               

               
Cow position:
               
chr27:23100728-23100862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
340-486
               

               
Cow position:
               
chr27:641125-641268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
340-488
               

               
Cow position:
               
chr27:30444760-30444907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
90, 105
               

               
Conread position:
               
340-489
               

               
Cow position:
               
chr27:31248689-31248840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
340-490
               

               
Cow position:
               
chr27:21951058-21951215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
340-498
               

               
Cow position:
               
chr27:22497942-22497787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
340-499
               

               
Cow position:
               
chr27:21419270-21419426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
340-499
               

               
Cow position:
               
chr27:26400801-26400961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
340-510
               

               
Cow position:
               
chr27:27606376-27606550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
342-499
               

               
Cow position:
               
chr27:16047580-16047729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 74
               

               
Conread position:
               
345-490
               

               
Cow position:
               
chr27:25790212-25790068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
68, 125
               

               
Conread position:
               
348-498
               

               
Cow position:
               
chr27:20561494-20561345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
352-498
               

               
Cow position:
               
chr27:23760073-23760221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
352-505
               

               
Cow position:
               
chr27:25382243-25382386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
352-506
               

               
Cow position:
               
chr27:21101382-21101541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
355-494
               

               
Cow position:
               
chr27:22150789-22150931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
68, 137
               

               
Conread position:
               
356-499
               

               
Cow position:
               
chr27:26939981-26939835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 138
               

               
Conread position:
               
357-499
               

               
Cow position:
               
chr27:21447926-21448064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
358-499
               

               
Cow position:
               
chr27:28062296-28062437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 132
               

               
Conread position:
               
358-505
               

               
Cow position:
               
chr27:19992051-19991900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 137
               

               
Conread position:
               
365-506
               

               
Cow position:
               
chr27:24952059-24952202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
366-490
               

               
Cow position:
               
chr27:5227428-5227549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
366-490
               

               
Cow position:
               
chr27:23527607-23527734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               
Show alignments to all cow chromosomes.