Cow genome map
| Conread name: | Ss1.1-rpigcf0_007690.5 |
| Conread position: | 31-251 |
| Cow position: | chr16:44748511-44748724 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 34-260 |
| Cow position: | chr16:44610726-44610512 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 56-270 |
| Cow position: | chr16:19045204-19044994 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 56-272 |
| Cow position: | chr16:933212-933000 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 60-234 |
| Cow position: | chr16:30182900-30183073 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 70-270 |
| Cow position: | chr16:12406627-12406428 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 70-272 |
| Cow position: | chr16:34520061-34519859 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-223 |
| Cow position: | chr16:15517941-15517790 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 71-229 |
| Cow position: | chr16:37391673-37391831 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-235 |
| Cow position: | chr16:37338579-37338743 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-268 |
| Cow position: | chr16:28048320-28048124 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 71-270 |
| Cow position: | chr16:51478325-51478523 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 190, 62 |
| Conread position: | 71-272 |
| Cow position: | chr16:22587243-22587042 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-231 |
| Cow position: | chr16:35057604-35057763 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 8, 18 |
| Conread position: | 72-270 |
| Cow position: | chr16:3117225-3117421 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 72-273 |
| Cow position: | chr16:24936202-24936007 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 75-260 |
| Cow position: | chr16:39829475-39829660 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 74, 115 |
| Conread position: | 83-235 |
| Cow position: | chr16:39692009-39692161 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 70 |
| Conread position: | 84-255 |
| Cow position: | chr16:2814242-2814407 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 91-270 |
| Cow position: | chr16:48982183-48982005 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 92-269 |
| Cow position: | chr16:25368002-25367825 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 135, 63 |
Show alignments to all cow chromosomes.