Cow genome map
| Conread name: | Ss1.1-rpigcf0_007690.5 |
| Conread position: | 39-256 |
| Cow position: | chr18:21716865-21717077 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 49-272 |
| Cow position: | chr18:2314915-2314691 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 52-233 |
| Cow position: | chr18:8326634-8326456 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 14, 106 |
| Conread position: | 55-270 |
| Cow position: | chr18:21280422-21280633 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 56-268 |
| Cow position: | chr18:18647492-18647704 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 173, 34 |
| Conread position: | 56-270 |
| Cow position: | chr18:49091637-49091434 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 56-272 |
| Cow position: | chr18:30516820-30516606 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 205, 12 |
| Conread position: | 60-220 |
| Cow position: | chr18:30977243-30977085 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 28 |
| Conread position: | 65-270 |
| Cow position: | chr18:24324069-24323869 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 70-272 |
| Cow position: | chr18:14210640-14210439 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 174, 22 |
| Conread position: | 71-270 |
| Cow position: | chr18:8649048-8648850 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 71-271 |
| Cow position: | chr18:30524764-30524565 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 72-271 |
| Cow position: | chr18:49148269-49148468 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-258 |
| Cow position: | chr18:53991133-53990946 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 73-272 |
| Cow position: | chr18:23350987-23351185 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 74-268 |
| Cow position: | chr18:22820297-22820102 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 122, 59 |
| Conread position: | 76-270 |
| Cow position: | chr18:13232707-13232514 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 84-270 |
| Cow position: | chr18:11405701-11405512 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 87-214 |
| Cow position: | chr18:21745312-21745437 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 88-272 |
| Cow position: | chr18:30214858-30214681 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 89-272 |
| Cow position: | chr18:5782499-5782316 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 115, 137 |
| Conread position: | 133-270 |
| Cow position: | chr18:25693758-25693894 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
Show alignments to all cow chromosomes.