Cow genome map
| Conread name: | Ss1.1-rpigcf0_007690.5 |
| Conread position: | 45-272 |
| Cow position: | chr20:27905259-27905488 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 16 |
| Conread position: | 47-228 |
| Cow position: | chr20:38922115-38921934 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 53-203 |
| Cow position: | chr20:6104577-6104726 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 54-272 |
| Cow position: | chr20:7387598-7387390 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 56-224 |
| Cow position: | chr20:6109012-6108845 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 109, 20 |
| Conread position: | 56-224 |
| Cow position: | chr20:33738128-33737964 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 58-270 |
| Cow position: | chr20:23147083-23147298 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 71 |
| Conread position: | 65-270 |
| Cow position: | chr20:16433337-16433533 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 68-265 |
| Cow position: | chr20:1724847-1725043 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 77, 186 |
| Conread position: | 70-272 |
| Cow position: | chr20:26126461-26126660 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 71-251 |
| Cow position: | chr20:23112546-23112367 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 71-258 |
| Cow position: | chr20:23364488-23364305 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 71-258 |
| Cow position: | chr20:35898853-35898666 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-271 |
| Cow position: | chr20:11022706-11022904 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 190, 18 |
| Conread position: | 71-272 |
| Cow position: | chr20:6570585-6570384 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 85, 193 |
| Conread position: | 71-273 |
| Cow position: | chr20:14356642-14356444 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 72-224 |
| Cow position: | chr20:7922901-7922748 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 72-272 |
| Cow position: | chr20:4110-3911 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 185, 56 |
| Conread position: | 72-306 |
| Cow position: | chr20:7827825-7827591 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 21 |
| Conread position: | 73-267 |
| Cow position: | chr20:21369785-21369592 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 73-269 |
| Cow position: | chr20:13317776-13317583 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 94, 37 |
| Conread position: | 73-272 |
| Cow position: | chr20:33769815-33770020 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 31 |
| Conread position: | 74-259 |
| Cow position: | chr20:2812830-2813012 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 75-270 |
| Cow position: | chr20:38406944-38406756 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 80-238 |
| Cow position: | chr20:14257991-14258146 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 80-290 |
| Cow position: | chr20:6098498-6098708 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 83-220 |
| Cow position: | chr20:22393655-22393792 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-267 |
| Cow position: | chr20:7144473-7144292 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 88-269 |
| Cow position: | chr20:25915044-25915225 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 88-272 |
| Cow position: | chr20:36041147-36041330 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 141 |
Show alignments to all cow chromosomes.