Cow genome map
| Conread name: | Ss1.1-rpigcf0_007690.5 |
| Conread position: | 39-224 |
| Cow position: | chr8:54847720-54847536 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 118, 25 |
| Conread position: | 39-444 |
| Cow position: | chr8:9157103-9157503 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 139 |
| Conread position: | 46-274 |
| Cow position: | chr8:25635959-25635736 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 47-268 |
| Cow position: | chr8:9841957-9841738 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 52-228 |
| Cow position: | chr8:26715928-26715753 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 123, 24 |
| Conread position: | 52-272 |
| Cow position: | chr8:47308248-47308462 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 56-224 |
| Cow position: | chr8:18337825-18337990 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 56-224 |
| Cow position: | chr8:21365779-21365611 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 56-235 |
| Cow position: | chr8:56850747-56850922 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 57-250 |
| Cow position: | chr8:56747370-56747175 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 63-233 |
| Cow position: | chr8:41954209-41954040 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 65-270 |
| Cow position: | chr8:33124206-33124406 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 65-270 |
| Cow position: | chr8:43467606-43467404 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 70-256 |
| Cow position: | chr8:34573057-34572871 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 10, 157 |
| Conread position: | 71-268 |
| Cow position: | chr8:59536743-59536938 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 53 |
| Conread position: | 71-271 |
| Cow position: | chr8:35281100-35281289 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 71-272 |
| Cow position: | chr8:43410573-43410369 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 71-283 |
| Cow position: | chr8:42377039-42376823 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 79, 67 |
| Conread position: | 72-234 |
| Cow position: | chr8:14881517-14881355 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-270 |
| Cow position: | chr8:33461638-33461835 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 72-272 |
| Cow position: | chr8:14601327-14601527 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-269 |
| Cow position: | chr8:14090020-14089827 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 73-270 |
| Cow position: | chr8:19178663-19178859 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 162, 15 |
| Conread position: | 82-270 |
| Cow position: | chr8:32643628-32643445 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 83-255 |
| Cow position: | chr8:54627307-54627479 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 84-264 |
| Cow position: | chr8:4139210-4139388 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 94-270 |
| Cow position: | chr8:4978391-4978215 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 6, 130 |
Show alignments to all cow chromosomes.