Cow genome map
| Conread name: | Ss1.1-rpigcf0_007690.5 |
| Conread position: | 26-270 |
| Cow position: | chr9:19879904-19879668 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 44-234 |
| Cow position: | chr9:9712467-9712655 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 48-218 |
| Cow position: | chr9:41819443-41819609 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 57-264 |
| Cow position: | chr9:20112573-20112366 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 173 |
| Conread position: | 58-253 |
| Cow position: | chr9:44435821-44435627 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 124 |
| Conread position: | 62-259 |
| Cow position: | chr9:46964996-46965192 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 63-270 |
| Cow position: | chr9:35737912-35737706 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 65-268 |
| Cow position: | chr9:64008369-64008166 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 69-252 |
| Cow position: | chr9:7935064-7934884 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 178, 21 |
| Conread position: | 70-273 |
| Cow position: | chr9:22567033-22567228 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 70-274 |
| Cow position: | chr9:54673993-54674193 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 71-224 |
| Cow position: | chr9:28606952-28606800 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 71-229 |
| Cow position: | chr9:22833595-22833437 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 152, 17 |
| Conread position: | 71-251 |
| Cow position: | chr9:15697312-15697492 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-270 |
| Cow position: | chr9:35472584-35472775 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 71-273 |
| Cow position: | chr9:54684058-54683855 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 72-220 |
| Cow position: | chr9:47883320-47883172 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-271 |
| Cow position: | chr9:34968985-34969181 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 73-271 |
| Cow position: | chr9:47896747-47896550 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 182, 92 |
| Conread position: | 74-269 |
| Cow position: | chr9:60336302-60336496 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 171, 74 |
| Conread position: | 78-268 |
| Cow position: | chr9:48636821-48636633 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 80-269 |
| Cow position: | chr9:61318512-61318326 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 91-267 |
| Cow position: | chr9:13639373-13639541 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 92-272 |
| Cow position: | chr9:26187559-26187740 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.