Cow genome map

Conread name: Ss1.1-rpigcf0_008825.5

Conread position: 1-194
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 124

Conread position: 1-226
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 120

Conread position: 9-290
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 71

Conread position: 9-291
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 104

Conread position: 9-292
Cow position:
Alignm length: 302
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 119

Conread position: 9-292
Cow position:
Alignm length: 296
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 110

Conread position: 9-300
Cow position:
Alignm length: 296
Alignm identity: 217
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 86

Conread position: 9-300
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 114

Conread position: 9-318
Cow position:
Alignm length: 329
Alignm identity: 219
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 116

Conread position: 9-319
Cow position:
Alignm length: 329
Alignm identity: 229
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 21, 113

Conread position: 9-319
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 208

Conread position: 9-319
Cow position:
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 88

Conread position: 10-292
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 114

Conread position: 15-294
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 9

Conread position: 38-300
Cow position:
Alignm length: 266
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 49

Conread position: 40-292
Cow position:
Alignm length: 262
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 75

Conread position: 43-273
Cow position:
Alignm length: 240
Alignm identity: 163
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 71

Conread position: 43-273
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 70

Conread position: 43-291
Cow position:
Alignm length: 259
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 64

Conread position: 43-292
Cow position:
Alignm length: 259
Alignm identity: 171
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 62

Conread position: 43-298
Cow position:
Alignm length: 260
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 77

Conread position: 43-298
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 70

Conread position: 43-298
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 62

Conread position: 43-299
Cow position:
Alignm length: 262
Alignm identity: 173
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 58

Conread position: 43-299
Cow position:
Alignm length: 266
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 62

Conread position: 43-319
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 22, 74

Conread position: 44-294
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 39

Conread position: 44-318
Cow position:
Alignm length: 279
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 23

Conread position: 54-292
Cow position:
Alignm length: 241
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 10

Conread position: 56-298
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 57

Conread position: 61-298
Cow position:
Alignm length: 245
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 42

Conread position: 61-299
Cow position:
Alignm length: 246
Alignm identity: 167
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 41

Conread position: 86-292
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 11

Conread position: 87-291
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 12

Conread position: 87-291
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 10

Conread position: 87-291
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 12

Conread position: 87-292
Cow position:
Alignm length: 208
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 118, 10

Conread position: 87-298
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 10

Conread position: 87-298
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 10

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-298
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 72, 10

Conread position: 87-298
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 116, 186

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-300
Cow position:
Alignm length: 216
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-319
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 10

Conread position: 87-319
Cow position:
Alignm length: 235
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 21

Conread position: 87-319
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-319
Cow position:
Alignm length: 235
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 118, 21

Conread position: 87-319
Cow position:
Alignm length: 235
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 10

Conread position: 88-319
Cow position:
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 9

Conread position: 94-315
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 102, 5

Conread position: 106-319
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 47

Conread position: 111-291
Cow position:
Alignm length: 183
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 133

Conread position: 111-298
Cow position:
Alignm length: 190
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 41

Conread position: 405-588
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 30

Conread position: 405-588
Cow position:
Alignm length: 186
Alignm identity: 152
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 406-539
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 406-584
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 20

Conread position: 406-584
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 406-588
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 406-588
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 52, 14

Conread position: 406-588
Cow position:
Alignm length: 186
Alignm identity: 148
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 169

Conread position: 406-588
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 145

Conread position: 406-588
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 58

Conread position: 407-561
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 407-564
Cow position:
Alignm length: 159
Alignm identity: 129
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 407-569
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 407-571
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 144, 0

Conread position: 407-574
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 21, 51

Conread position: 407-576
Cow position:
Alignm length: 173
Alignm identity: 137
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 407-579
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 407-579
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 407-582
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 83

Conread position: 407-584
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 407-584
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 407-586
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 15, 83

Conread position: 407-586
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 18, 13

Conread position: 407-586
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 81

Conread position: 407-587
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 407-587
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 155, 17

Conread position: 407-588
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 119, 32

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 144
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 145
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 407-588
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 39

Conread position: 407-588
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 408-584
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 408-588
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 31

Conread position: 408-588
Cow position:
Alignm length: 185
Alignm identity: 148
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 25, 69

Conread position: 409-561
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 409-586
Cow position:
Alignm length: 179
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 87

Conread position: 409-588
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 78

Conread position: 409-588
Cow position:
Alignm length: 182
Alignm identity: 145
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 24, 116

Conread position: 410-565
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 410-566
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 39

Conread position: 410-588
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 30, 49

Conread position: 410-588
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 410-588
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 85, 35

Conread position: 410-588
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 89

Conread position: 412-588
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 27, 12

Conread position: 413-583
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 414-535
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 415-588
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 423-588
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 424-545
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 427-587
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 66

Conread position: 432-586
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 432-588
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 433-588
Cow position:
Alignm length: 156
Alignm identity: 126
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 433-588
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 434-588
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 441-588
Cow position:
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 441-588
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 445-585
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 445-588
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 52

Conread position: 447-557
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 450-586
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 450-587
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 457-587
Cow position:
Alignm length: 131
Alignm identity: 107
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 458-587
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 459-588
Cow position:
Alignm length: 130
Alignm identity: 107
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 460-588
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 462-588
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 462-588
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 469-588
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 6

Conread position: 474-588
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 499-588
Cow position:
Alignm length: 91
Alignm identity: 81
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Show alignments to all cow chromosomes.