Cow genome map
| Conread name: | Ss1.1-rpigcf0_008825.5 |
| Conread position: | 1-194 |
| Cow position: | chr1:93250290-93250497 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 124 |
| Conread position: | 1-226 |
| Cow position: | chr1:33580826-33580589 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 120 |
| Conread position: | 9-290 |
| Cow position: | chr1:36527791-36528080 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 71 |
| Conread position: | 9-291 |
| Cow position: | chr1:66913124-66913416 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 9-292 |
| Cow position: | chr1:53251048-53250759 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 119 |
| Conread position: | 9-292 |
| Cow position: | chr1:74881482-74881190 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 35, 110 |
| Conread position: | 9-300 |
| Cow position: | chr1:21426160-21426441 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 34, 86 |
| Conread position: | 9-300 |
| Cow position: | chr1:88306079-88305777 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 36, 114 |
| Conread position: | 9-318 |
| Cow position: | chr1:16848369-16848688 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 116 |
| Conread position: | 9-319 |
| Cow position: | chr1:42771919-42771600 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 9-319 |
| Cow position: | chr1:56450106-56450430 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 208 |
| Conread position: | 9-319 |
| Cow position: | chr1:88614978-88615278 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 10-292 |
| Cow position: | chr1:69212101-69211807 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 33, 114 |
| Conread position: | 15-294 |
| Cow position: | chr1:53309785-53309500 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 38-300 |
| Cow position: | chr1:70986686-70986430 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 40-292 |
| Cow position: | chr1:3617588-3617334 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 43-273 |
| Cow position: | chr1:26573313-26573077 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 43-273 |
| Cow position: | chr1:73642596-73642367 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 43-291 |
| Cow position: | chr1:49267782-49268036 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 43-292 |
| Cow position: | chr1:22481761-22481506 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 43-298 |
| Cow position: | chr1:31351862-31351606 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 77 |
| Conread position: | 43-298 |
| Cow position: | chr1:50372162-50371907 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 43-298 |
| Cow position: | chr1:91901918-91902179 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 43-299 |
| Cow position: | chr1:26607662-26607404 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 29, 58 |
| Conread position: | 43-299 |
| Cow position: | chr1:53371257-53371519 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 43-319 |
| Cow position: | chr1:13271485-13271200 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 44-294 |
| Cow position: | chr1:30301157-30301400 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 44-318 |
| Cow position: | chr1:19758801-19758532 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 54-292 |
| Cow position: | chr1:21677719-21677955 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 56-298 |
| Cow position: | chr1:37864790-37864549 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 61-298 |
| Cow position: | chr1:10725544-10725784 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 61-299 |
| Cow position: | chr1:85777539-85777298 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 86-292 |
| Cow position: | chr1:66972207-66972003 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 87-291 |
| Cow position: | chr1:33040081-33039879 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 87-291 |
| Cow position: | chr1:69671670-69671468 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-291 |
| Cow position: | chr1:89090585-89090383 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 87-292 |
| Cow position: | chr1:79454015-79453812 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 118, 10 |
| Conread position: | 87-298 |
| Cow position: | chr1:7196268-7196059 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-298 |
| Cow position: | chr1:8745449-8745658 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-298 |
| Cow position: | chr1:11666611-11666402 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-298 |
| Cow position: | chr1:13405434-13405225 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 87-298 |
| Cow position: | chr1:21134156-21133947 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-298 |
| Cow position: | chr1:31106442-31106233 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-298 |
| Cow position: | chr1:40058056-40058265 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-298 |
| Cow position: | chr1:67832185-67831976 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-298 |
| Cow position: | chr1:82909878-82909669 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-298 |
| Cow position: | chr1:85630287-85630496 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-298 |
| Cow position: | chr1:86545186-86544977 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-298 |
| Cow position: | chr1:89224961-89225172 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 116, 186 |
| Conread position: | 87-298 |
| Cow position: | chr1:91673183-91673392 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-300 |
| Cow position: | chr1:88178809-88179020 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-319 |
| Cow position: | chr1:54932879-54933109 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-319 |
| Cow position: | chr1:59203312-59203082 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-319 |
| Cow position: | chr1:59483912-59483682 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-319 |
| Cow position: | chr1:76872833-76873063 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 118, 21 |
| Conread position: | 87-319 |
| Cow position: | chr1:91104993-91105223 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 88-319 |
| Cow position: | chr1:26812120-26811891 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 9 |
| Conread position: | 94-315 |
| Cow position: | chr1:56653368-56653153 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 102, 5 |
| Conread position: | 106-319 |
| Cow position: | chr1:31534818-31535033 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 111-291 |
| Cow position: | chr1:71794505-71794686 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 133 |
| Conread position: | 111-298 |
| Cow position: | chr1:78922041-78921853 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 41 |
| Conread position: | 405-588 |
| Cow position: | chr1:27546188-27546365 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 30 |
| Conread position: | 405-588 |
| Cow position: | chr1:64098878-64098693 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 152 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 406-539 |
| Cow position: | chr1:100132280-100132419 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 406-584 |
| Cow position: | chr1:31951763-31951941 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 406-584 |
| Cow position: | chr1:100388051-100387875 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 406-588 |
| Cow position: | chr1:14560145-14559966 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 406-588 |
| Cow position: | chr1:25885694-25885515 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 406-588 |
| Cow position: | chr1:59910984-59911168 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 169 |
| Conread position: | 406-588 |
| Cow position: | chr1:80329549-80329370 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 145 |
| Conread position: | 406-588 |
| Cow position: | chr1:81371067-81370890 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 407-561 |
| Cow position: | chr1:22072056-22072204 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 407-564 |
| Cow position: | chr1:68332792-68332634 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 407-569 |
| Cow position: | chr1:37739381-37739226 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 407-571 |
| Cow position: | chr1:41092765-41092599 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 407-574 |
| Cow position: | chr1:64479555-64479391 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 407-576 |
| Cow position: | chr1:71555396-71555224 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 407-579 |
| Cow position: | chr1:11831724-11831888 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 407-579 |
| Cow position: | chr1:54365210-54365037 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 407-582 |
| Cow position: | chr1:49728287-49728463 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 407-584 |
| Cow position: | chr1:23510379-23510211 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 407-584 |
| Cow position: | chr1:28512238-28512073 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 407-586 |
| Cow position: | chr1:37432787-37432967 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 407-586 |
| Cow position: | chr1:61242124-61242304 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 407-586 |
| Cow position: | chr1:101884021-101884194 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 407-587 |
| Cow position: | chr1:6866004-6865824 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-587 |
| Cow position: | chr1:64745342-64745165 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 155, 17 |
| Conread position: | 407-588 |
| Cow position: | chr1:3750306-3750481 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 119, 32 |
| Conread position: | 407-588 |
| Cow position: | chr1:11878778-11878597 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-588 |
| Cow position: | chr1:65155369-65155188 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-588 |
| Cow position: | chr1:69290549-69290727 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 407-588 |
| Cow position: | chr1:85409460-85409279 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 24, 39 |
| Conread position: | 407-588 |
| Cow position: | chr1:101966952-101966770 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 408-584 |
| Cow position: | chr1:5378796-5378970 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 408-588 |
| Cow position: | chr1:2599316-2599132 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 102, 31 |
| Conread position: | 408-588 |
| Cow position: | chr1:88017427-88017244 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 409-561 |
| Cow position: | chr1:8726303-8726147 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 409-586 |
| Cow position: | chr1:3746511-3746686 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 409-588 |
| Cow position: | chr1:39244142-39243960 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 409-588 |
| Cow position: | chr1:82572835-82572657 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 24, 116 |
| Conread position: | 410-565 |
| Cow position: | chr1:57757600-57757747 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 410-566 |
| Cow position: | chr1:20135703-20135858 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 83, 39 |
| Conread position: | 410-588 |
| Cow position: | chr1:85642-85821 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 30, 49 |
| Conread position: | 410-588 |
| Cow position: | chr1:18223460-18223289 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 410-588 |
| Cow position: | chr1:52207401-52207575 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 410-588 |
| Cow position: | chr1:62041783-62041956 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 412-588 |
| Cow position: | chr1:22495961-22496134 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 413-583 |
| Cow position: | chr1:71272441-71272602 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 414-535 |
| Cow position: | chr1:78752595-78752472 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 415-588 |
| Cow position: | chr1:47371363-47371527 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 423-588 |
| Cow position: | chr1:34890884-34890722 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 424-545 |
| Cow position: | chr1:71086153-71086273 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 427-587 |
| Cow position: | chr1:40420029-40419873 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 432-586 |
| Cow position: | chr1:77755280-77755126 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 432-588 |
| Cow position: | chr1:39251423-39251576 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 433-588 |
| Cow position: | chr1:34893007-34893162 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 433-588 |
| Cow position: | chr1:54217414-54217263 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 434-588 |
| Cow position: | chr1:96049736-96049888 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 441-588 |
| Cow position: | chr1:45979083-45979229 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 441-588 |
| Cow position: | chr1:63134354-63134501 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-585 |
| Cow position: | chr1:9511845-9511706 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 445-588 |
| Cow position: | chr1:78885414-78885273 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 447-557 |
| Cow position: | chr1:69062426-69062536 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 450-586 |
| Cow position: | chr1:40434961-40434829 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 450-587 |
| Cow position: | chr1:2203906-2203769 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 457-587 |
| Cow position: | chr1:34311331-34311459 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 458-587 |
| Cow position: | chr1:32365104-32364976 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 459-588 |
| Cow position: | chr1:53568094-53568223 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 460-588 |
| Cow position: | chr1:90370302-90370174 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 462-588 |
| Cow position: | chr1:19439036-19438904 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 462-588 |
| Cow position: | chr1:87910738-87910863 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 469-588 |
| Cow position: | chr1:2412704-2412589 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 111, 6 |
| Conread position: | 474-588 |
| Cow position: | chr1:23625300-23625414 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 499-588 |
| Cow position: | chr1:71111826-71111736 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
Show alignments to all cow chromosomes.