Cow genome map


           Conread name:
           Ss1.1-rpigcf0_008825.5
        

               Conread position:
               9-319
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               34, 76
               

               Conread position:
               9-319
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               34, 114
               

               Conread position:
               10-274
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 114
               

               Conread position:
               15-298
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               29-229
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               35, 87
               

               Conread position:
               32-319
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               43-273
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 29
               

               Conread position:
               43-286
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               47, 85
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 62
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               30, 41
               

               Conread position:
               43-319
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               20, 66
               

               Conread position:
               54-318
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               12, 157
               

               Conread position:
               69-273
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               87-290
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               87-291
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               118, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               118, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               88-291
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               71, 9
               

               Conread position:
               111-298
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               111-298
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               403-588
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               405-546
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               406-587
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               406-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               8, 87
               

               Conread position:
               406-588
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               407-543
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 53
               

               Conread position:
               407-551
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               407-560
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               150, 38
               

               Conread position:
               407-564
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               153, 79
               

               Conread position:
               407-571
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 84
               

               Conread position:
               407-581
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               31, 36
               

               Conread position:
               407-581
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               407-583
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               26, 96
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               24, 53
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               151
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               24, 68
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               408-530
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               408-586
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 147
               

               Conread position:
               409-539
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               16, 87
               

               Conread position:
               409-556
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               71, 30
               

               Conread position:
               409-586
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               153, 23
               

               Conread position:
               409-586
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               409-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               409-588
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               410-554
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 47
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               411-564
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               411-579
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               411-584
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               412-588
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               27, 75
               

               Conread position:
               413-568
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               413-571
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               413-585
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               416-588
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               420-587
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               421-583
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               424-583
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               427-588
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               140
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               91, 5
               

               Conread position:
               432-587
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               433-588
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               438-588
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               93, 29
               

               Conread position:
               440-588
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 9
               

               Conread position:
               441-568
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               441-568
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               441-576
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               441-582
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               444-588
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               445-588
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               448-587
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               450-588
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               452-588
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               467-582
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               505-588
               

               Cow position:
               
               

               Alignm length:
               84
               

               Alignm identity:
               74
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.