Cow genome map


           Conread name:
           Ss1.1-rpigcf0_008825.5
        

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 107
               

               Conread position:
               9-294
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 146
               

               Conread position:
               9-319
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               34, 115
               

               Conread position:
               9-327
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               31, 113
               

               Conread position:
               10-295
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               30, 240
               

               Conread position:
               42-291
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               43-292
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 114
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               30, 114
               

               Conread position:
               43-310
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               43-319
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               43-319
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 62
               

               Conread position:
               45-292
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               45-292
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               26, 58
               

               Conread position:
               71-273
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               87-290
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-291
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               88-298
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               106, 22
               

               Conread position:
               110-284
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               111-298
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               406-543
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 87
               

               Conread position:
               406-584
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               406-586
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 50
               

               Conread position:
               406-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               407-584
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 64
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               143, 38
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               150
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               136, 38
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               111, 32
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               109, 37
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               34, 17
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               24, 173
               

               Conread position:
               408-569
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               156, 22
               

               Conread position:
               409-588
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               25, 124
               

               Conread position:
               410-536
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               78, 29
               

               Conread position:
               411-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 36
               

               Conread position:
               427-588
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               429-587
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               95, 56
               

               Conread position:
               432-586
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 53
               

               Conread position:
               433-588
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               441-588
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               442-588
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               442-588
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               445-587
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               448-587
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               454-588
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 35
               

               Conread position:
               460-557
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.