Cow genome map


           Conread name:
           Ss1.1-rpigcf0_008825.5
        

               Conread position:
               1-298
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               9, 124
               

               Conread position:
               1-300
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               12, 124
               

               Conread position:
               9-273
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               33-226
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 10
               

               Conread position:
               33-292
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 10
               

               Conread position:
               38-292
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               32, 78
               

               Conread position:
               43-273
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               43-292
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               43-300
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 29
               

               Conread position:
               43-319
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               44-318
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               45-317
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               46-310
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               80-289
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               86-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               119, 11
               

               Conread position:
               87-286
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 10
               

               Conread position:
               87-291
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 11
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 12
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-299
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               115, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               111-298
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               114-273
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               406-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               36, 110
               

               Conread position:
               406-588
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               407-573
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               407-583
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               407-585
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               407-585
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               145, 32
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               150
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               153
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               24, 145
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               151
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               149
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               408-586
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               151
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               169, 33
               

               Conread position:
               409-587
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               410-583
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 75
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               411-586
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 28
               

               Conread position:
               411-588
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               134, 171
               

               Conread position:
               416-565
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               432-584
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               432-587
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               432-588
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               432-588
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               432-588
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               433-588
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               74, 128
               

               Conread position:
               434-588
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               435-583
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               126, 42
               

               Conread position:
               439-586
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               439-586
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               441-584
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               441-587
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               445-573
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               445-587
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               448-588
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               452-584
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               452-588
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               452-588
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               456-588
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               501-588
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.