Cow genome map
Conread name: | Ss1.1-rpigcf0_008825.5 |
Conread position: | 1-310 |
Cow position: | chr17:23280313-23280005 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 214 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 11, 28 |
Conread position: | 2-264 |
Cow position: | chr17:3606060-3605789 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 187 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 9, 117 |
Conread position: | 9-300 |
Cow position: | chr17:18850173-18850477 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 226 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 12, 113 |
Conread position: | 43-291 |
Cow position: | chr17:15808713-15808964 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 166 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 29, 49 |
Conread position: | 43-299 |
Cow position: | chr17:27434349-27434606 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 184 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 25, 81 |
Conread position: | 43-317 |
Cow position: | chr17:20694924-20695210 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 195 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 20, 73 |
Conread position: | 43-317 |
Cow position: | chr17:38942332-38942607 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 190 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 26, 72 |
Conread position: | 55-298 |
Cow position: | chr17:22237297-22237539 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 180 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 17, 58 |
Conread position: | 87-287 |
Cow position: | chr17:183922-184120 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 142 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 55, 10 |
Conread position: | 87-292 |
Cow position: | chr17:31050645-31050448 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 145 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 69, 15 |
Conread position: | 87-296 |
Cow position: | chr17:29820910-29821117 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 154 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 114, 21 |
Conread position: | 87-298 |
Cow position: | chr17:15117592-15117801 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 151 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 59, 21 |
Conread position: | 87-298 |
Cow position: | chr17:15325460-15325252 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 145 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 72, 21 |
Conread position: | 87-298 |
Cow position: | chr17:15709218-15709009 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 144 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 72, 21 |
Conread position: | 87-298 |
Cow position: | chr17:15719118-15719327 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 144 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 72, 21 |
Conread position: | 87-298 |
Cow position: | chr17:44641695-44641486 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 144 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 72, 21 |
Conread position: | 87-319 |
Cow position: | chr17:452629-452857 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 158 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 118, 10 |
Conread position: | 87-319 |
Cow position: | chr17:2264968-2265200 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 159 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 37, 10 |
Conread position: | 87-327 |
Cow position: | chr17:22106860-22106620 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 168 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 72, 10 |
Conread position: | 88-298 |
Cow position: | chr17:29825185-29824977 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 145 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 71, 9 |
Conread position: | 88-299 |
Cow position: | chr17:18100299-18100089 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 147 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 71, 9 |
Conread position: | 88-319 |
Cow position: | chr17:19215618-19215389 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 159 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 71, 9 |
Conread position: | 89-298 |
Cow position: | chr17:6122560-6122767 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 146 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 70, 8 |
Conread position: | 406-586 |
Cow position: | chr17:10261560-10261735 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 139 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 25, 53 |
Conread position: | 406-587 |
Cow position: | chr17:33271335-33271154 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 145 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 47, 26 |
Conread position: | 406-588 |
Cow position: | chr17:12842710-12842892 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 140 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 25, 98 |
Conread position: | 407-564 |
Cow position: | chr17:701842-701999 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 25, 153 |
Conread position: | 407-579 |
Cow position: | chr17:13703740-13703913 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 131 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 407-584 |
Cow position: | chr17:404304-404488 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 146 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 15, 33 |
Conread position: | 407-585 |
Cow position: | chr17:15450943-15451115 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 139 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 24, 121 |
Conread position: | 407-586 |
Cow position: | chr17:3223804-3223973 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 139 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 407-586 |
Cow position: | chr17:11225631-11225808 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 134 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 407-586 |
Cow position: | chr17:34319697-34319508 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 135 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 407-588 |
Cow position: | chr17:2736162-2736342 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 142 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 19, 106 |
Conread position: | 407-588 |
Cow position: | chr17:7211060-7211240 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 145 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 407-588 |
Cow position: | chr17:10850902-10850730 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 132 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 407-588 |
Cow position: | chr17:17500907-17500739 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 135 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 407-588 |
Cow position: | chr17:18417795-18417608 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 145 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 18, 118 |
Conread position: | 407-588 |
Cow position: | chr17:26481268-26481449 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 145 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 24, 167 |
Conread position: | 407-588 |
Cow position: | chr17:28847201-28847019 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 149 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 28, 93 |
Conread position: | 407-588 |
Cow position: | chr17:32451215-32451027 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 148 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 410-587 |
Cow position: | chr17:19789427-19789252 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 142 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 143, 59 |
Conread position: | 411-586 |
Cow position: | chr17:43143344-43143165 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 135 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 18, 102 |
Conread position: | 413-588 |
Cow position: | chr17:4625215-4625387 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 139 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 413-588 |
Cow position: | chr17:27622453-27622287 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 130 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 418-587 |
Cow position: | chr17:13235969-13236138 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 132 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 433-586 |
Cow position: | chr17:19447313-19447164 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 86, 93 |
Conread position: | 433-588 |
Cow position: | chr17:10436877-10436726 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 437-587 |
Cow position: | chr17:26630735-26630587 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 441-586 |
Cow position: | chr17:14780023-14780167 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 449-587 |
Cow position: | chr17:45212580-45212443 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 111 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 34, 16 |
Conread position: | 450-588 |
Cow position: | chr17:37722662-37722523 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 109 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 450-588 |
Cow position: | chr17:41899117-41898977 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 108 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 451-582 |
Cow position: | chr17:1364595-1364466 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 99 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 463-588 |
Cow position: | chr17:25117576-25117701 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 476-588 |
Cow position: | chr17:3797788-3797900 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 94 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.