Cow genome map


           Conread name:
           Ss1.1-rpigcf0_008825.5
        

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               10-298
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 113
               

               Conread position:
               13-271
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 164
               

               Conread position:
               17-298
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               26, 111
               

               Conread position:
               31-319
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 60
               

               Conread position:
               41-298
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               32, 64
               

               Conread position:
               43-291
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               45-298
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               25, 19
               

               Conread position:
               49-295
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               26, 64
               

               Conread position:
               54-296
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               16, 87
               

               Conread position:
               60-298
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               10, 53
               

               Conread position:
               76-288
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               87-291
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               160-298
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               406-558
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               28, 14
               

               Conread position:
               406-586
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               406-586
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               406-587
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               406-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               406-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               407-531
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               16, 54
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               149
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               21, 47
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               24, 131
               

               Conread position:
               408-571
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               408-586
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               147
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               409-585
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               410-584
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               413-588
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               427-588
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               427-588
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               427-588
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               432-588
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               437-583
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               441-587
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               445-588
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               455-584
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               460-588
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               104, 52
               

               Conread position:
               484-588
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               94, 0
               
Show alignments to all cow chromosomes.