Cow genome map

Conread name: Ss1.1-rpigcf0_008825.5

Conread position: 8-299
Cow position: chr22:6420815-6420512 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 100

Conread position: 9-295
Cow position: chr22:36364683-36364988 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 9-297
Cow position: chr22:653864-653577 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 110

Conread position: 9-300
Cow position: chr22:31110236-31110532 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 56, 34

Conread position: 9-319
Cow position: chr22:13865934-13865618 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 112

Conread position: 33-299
Cow position: chr22:33952107-33951836 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 10

Conread position: 35-318
Cow position: chr22:45470247-45469967 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 37

Conread position: 43-292
Cow position: chr22:39465689-39465434 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 47

Conread position: 43-298
Cow position: chr22:10907350-10907092 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 63

Conread position: 43-298
Cow position: chr22:29854708-29854964 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 33

Conread position: 43-298
Cow position: chr22:44366358-44366097 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 63

Conread position: 43-315
Cow position: chr22:16440438-16440701 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 42

Conread position: 45-314
Cow position: chr22:5058507-5058776 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 74

Conread position: 61-292
Cow position: chr22:9729100-9728866 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 26

Conread position: 61-292
Cow position: chr22:42994047-42994280 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 155
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 34

Conread position: 62-271
Cow position: chr22:6947154-6947366 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 51

Conread position: 87-291
Cow position: chr22:21193298-21193096 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-291
Cow position: chr22:30675823-30675621 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 10

Conread position: 87-298
Cow position: chr22:3714599-3714390 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position: chr22:22106947-22107156 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-298
Cow position: chr22:25725100-25724891 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position: chr22:43235741-43235950 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 21

Conread position: 87-298
Cow position: chr22:44381554-44381345 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-302
Cow position: chr22:15309059-15308844 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-319
Cow position: chr22:3275453-3275223 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 10

Conread position: 87-319
Cow position: chr22:28997683-28997453 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 111-298
Cow position: chr22:696856-697044 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 45

Conread position: 122-314
Cow position: chr22:6678770-6678582 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 19

Conread position: 407-571
Cow position: chr22:12627877-12627714 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 33, 90

Conread position: 407-583
Cow position: chr22:4058188-4058364 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 166, 32

Conread position: 407-586
Cow position: chr22:18324545-18324369 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 49

Conread position: 407-586
Cow position: chr22:29064739-29064910 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 407-588
Cow position: chr22:12537186-12537004 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 28, 0

Conread position: 407-588
Cow position: chr22:22010595-22010416 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 407-588
Cow position: chr22:24435957-24435775 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 49

Conread position: 407-588
Cow position: chr22:29004900-29004718 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 17, 140

Conread position: 407-588
Cow position: chr22:32018223-32018042 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 49

Conread position: 407-588
Cow position: chr22:34087131-34086942 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 407-588
Cow position: chr22:41321706-41321883 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 151
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 29, 13

Conread position: 407-588
Cow position: chr22:44637978-44638167 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 75

Conread position: 407-588
Cow position: chr22:44687341-44687529 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 154
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 52, 0

Conread position: 410-588
Cow position: chr22:42421349-42421177 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 23, 53

Conread position: 410-588
Cow position: chr22:44037581-44037754 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 129

Conread position: 412-587
Cow position: chr22:25458257-25458423 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 139, 63

Conread position: 413-588
Cow position: chr22:24257356-24257180 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 46

Conread position: 427-588
Cow position: chr22:7281642-7281804 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 432-588
Cow position: chr22:5358749-5358900 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 433-587
Cow position: chr22:14730125-14729973 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 441-586
Cow position: chr22:40046507-40046650 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 449-571
Cow position: chr22:5714877-5714755 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 450-585
Cow position: chr22:23160951-23161086 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 43

Conread position: 451-588
Cow position: chr22:45788043-45787907 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 96

Conread position: 505-588
Cow position: chr22:35331013-35331096 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.