Cow genome map


           Conread name:
           Ss1.1-rpigcf0_008825.5
        

               Conread position:
               8-299
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               35, 100
               

               Conread position:
               9-295
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               9-297
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 110
               

               Conread position:
               9-300
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               56, 34
               

               Conread position:
               9-319
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               34, 112
               

               Conread position:
               33-299
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               35-318
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               10, 37
               

               Conread position:
               43-292
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 47
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 63
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 33
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               32, 63
               

               Conread position:
               43-315
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               45-314
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               61-292
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               61-292
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               62-271
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               87-291
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-291
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-302
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               111-298
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               122-314
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               34, 19
               

               Conread position:
               407-571
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               33, 90
               

               Conread position:
               407-583
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               166, 32
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 49
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               17, 140
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               151
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               154
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               26, 129
               

               Conread position:
               412-587
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               139, 63
               

               Conread position:
               413-588
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               427-588
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               432-588
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               433-587
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               441-586
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               449-571
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               450-585
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               451-588
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               41, 96
               

               Conread position:
               505-588
               

               Cow position:
               
               

               Alignm length:
               84
               

               Alignm identity:
               74
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.