Cow genome map


           Conread name:
           Ss1.1-rpigcf0_008825.5
        

               Conread position:
               11-319
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               32, 68
               

               Conread position:
               35-298
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               35, 78
               

               Conread position:
               43-290
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 114
               

               Conread position:
               43-291
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               43-299
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 66
               

               Conread position:
               44-301
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 69
               

               Conread position:
               61-298
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               87-291
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               87-294
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               68, 25
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               88-318
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               111-291
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               407-580
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               22, 117
               

               Conread position:
               407-582
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               27, 110
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 110
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               79, 169
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               14, 112
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 65
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               23, 110
               

               Conread position:
               409-546
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               410-554
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               410-584
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               410-585
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               410-586
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 157
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               411-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               412-588
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               432-588
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               436-588
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               8, 38
               

               Conread position:
               441-588
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               450-546
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               492-588
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.