Cow genome map


           Conread name:
           Ss1.1-rpigcf0_008825.5
        

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               8-298
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               75, 35
               

               Conread position:
               9-296
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               9-319
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               34, 116
               

               Conread position:
               9-319
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               15-319
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 82
               

               Conread position:
               40-300
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               43-250
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 70
               

               Conread position:
               43-292
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               43-313
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               29, 57
               

               Conread position:
               43-319
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 28
               

               Conread position:
               43-319
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 106
               

               Conread position:
               61-298
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               61-314
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               87-272
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               87-291
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               88-287
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 9
               

               Conread position:
               88-292
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               117, 9
               

               Conread position:
               111-287
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               111-298
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               400-587
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               405-587
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               406-587
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               407-585
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 138
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 92
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 109
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               26, 109
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               408-585
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               146
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               410-565
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               410-586
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               108, 35
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               74, 28
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               411-588
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               147
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               413-586
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               433-588
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               7, 71
               

               Conread position:
               433-588
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               112, 34
               

               Conread position:
               441-586
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               441-587
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               450-587
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               459-588
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               
Show alignments to all cow chromosomes.