Cow genome map


           Conread name:
           Ss1.1-rpigcf0_008825.5
        

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 229
               

               Conread position:
               9-298
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 115
               

               Conread position:
               10-319
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 112
               

               Conread position:
               13-298
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               31, 83
               

               Conread position:
               42-315
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 77
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               61-292
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               87-290
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 10
               

               Conread position:
               87-299
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               87-299
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               88-292
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               71, 9
               

               Conread position:
               111-298
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               113-319
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               362-588
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               405-588
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               407-570
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 85
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               30, 59
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 92
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               24, 132
               

               Conread position:
               408-586
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 141
               

               Conread position:
               409-586
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               409-588
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               410-585
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               410-587
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               21, 151
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               150
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               413-586
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               431-588
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               432-587
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-586
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               440-588
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 76
               

               Conread position:
               441-588
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               442-588
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               443-586
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               443-588
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               481-583
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.