Cow genome map
| Conread name: | Ss1.1-rpigcf0_008825.5 |
| Conread position: | 1-319 |
| Cow position: | chr3:53908212-53907874 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 9-298 |
| Cow position: | chr3:43482514-43482817 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 34, 119 |
| Conread position: | 9-298 |
| Cow position: | chr3:58103322-58103621 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 32, 112 |
| Conread position: | 9-317 |
| Cow position: | chr3:64825723-64825408 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 30, 121 |
| Conread position: | 9-319 |
| Cow position: | chr3:4810888-4811197 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 9-319 |
| Cow position: | chr3:31526995-31526679 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 9-319 |
| Cow position: | chr3:66608313-66608617 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 15-302 |
| Cow position: | chr3:27222800-27223092 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 33-294 |
| Cow position: | chr3:33759651-33759398 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 43-290 |
| Cow position: | chr3:29574349-29574096 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 43-291 |
| Cow position: | chr3:19831375-19831124 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 121 |
| Conread position: | 43-291 |
| Cow position: | chr3:61173274-61173525 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 43-292 |
| Cow position: | chr3:77273015-77272764 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 43-298 |
| Cow position: | chr3:6713786-6714045 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 41 |
| Conread position: | 43-298 |
| Cow position: | chr3:48845783-48846044 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 43-298 |
| Cow position: | chr3:51848069-51848313 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 167, 36 |
| Conread position: | 43-299 |
| Cow position: | chr3:16225658-16225916 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 43-317 |
| Cow position: | chr3:8098133-8098407 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 49-299 |
| Cow position: | chr3:5474324-5474578 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 54-298 |
| Cow position: | chr3:23012019-23012261 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 55-298 |
| Cow position: | chr3:56963640-56963393 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 61-290 |
| Cow position: | chr3:30616139-30615907 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 61-292 |
| Cow position: | chr3:5951818-5951584 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 61-292 |
| Cow position: | chr3:40285518-40285284 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 63-319 |
| Cow position: | chr3:62543595-62543345 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 80-298 |
| Cow position: | chr3:32412866-32412651 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 79, 7 |
| Conread position: | 82-300 |
| Cow position: | chr3:71236305-71236099 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 93, 5 |
| Conread position: | 87-272 |
| Cow position: | chr3:76001126-76000944 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-290 |
| Cow position: | chr3:66888367-66888166 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-290 |
| Cow position: | chr3:68697136-68696935 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-291 |
| Cow position: | chr3:34347251-34347049 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-291 |
| Cow position: | chr3:64376880-64376679 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-292 |
| Cow position: | chr3:56645501-56645299 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-298 |
| Cow position: | chr3:7155978-7155769 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 87-298 |
| Cow position: | chr3:13723884-13723674 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-298 |
| Cow position: | chr3:14679916-14680125 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 87-298 |
| Cow position: | chr3:19798323-19798114 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-298 |
| Cow position: | chr3:19880880-19881087 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 21 |
| Conread position: | 87-298 |
| Cow position: | chr3:35342479-35342688 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-298 |
| Cow position: | chr3:36594652-36594861 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-298 |
| Cow position: | chr3:40048718-40048927 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-298 |
| Cow position: | chr3:41207768-41207559 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 118, 21 |
| Conread position: | 87-298 |
| Cow position: | chr3:49563839-49564055 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-298 |
| Cow position: | chr3:49611379-49611170 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 87-298 |
| Cow position: | chr3:68889743-68889534 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 87-299 |
| Cow position: | chr3:32620212-32620002 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 87-319 |
| Cow position: | chr3:68870921-68870691 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 90-303 |
| Cow position: | chr3:75840157-75839946 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 104-298 |
| Cow position: | chr3:73636724-73636919 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 111-300 |
| Cow position: | chr3:58065241-58065055 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 111-319 |
| Cow position: | chr3:22512166-22512372 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 94 |
| Conread position: | 158-318 |
| Cow position: | chr3:23880266-23880107 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 400-583 |
| Cow position: | chr3:28707322-28707502 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 157, 20 |
| Conread position: | 406-546 |
| Cow position: | chr3:6798615-6798480 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 406-579 |
| Cow position: | chr3:52657875-52658046 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 406-587 |
| Cow position: | chr3:1339284-1339462 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 406-587 |
| Cow position: | chr3:5317383-5317201 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 407-532 |
| Cow position: | chr3:27879548-27879423 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 407-571 |
| Cow position: | chr3:79315562-79315720 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 30, 127 |
| Conread position: | 407-574 |
| Cow position: | chr3:3690317-3690156 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 407-576 |
| Cow position: | chr3:69148162-69147993 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 24, 77 |
| Conread position: | 407-579 |
| Cow position: | chr3:60947815-60947642 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 407-583 |
| Cow position: | chr3:43967031-43966865 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 407-584 |
| Cow position: | chr3:13527009-13527178 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 407-585 |
| Cow position: | chr3:15091251-15091424 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 147 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 407-586 |
| Cow position: | chr3:12311455-12311637 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 25, 74 |
| Conread position: | 407-586 |
| Cow position: | chr3:12531738-12531559 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-586 |
| Cow position: | chr3:23478610-23478790 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 121, 157 |
| Conread position: | 407-587 |
| Cow position: | chr3:24532199-24532382 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 407-587 |
| Cow position: | chr3:36514972-36514802 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 407-587 |
| Cow position: | chr3:73154337-73154508 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 407-588 |
| Cow position: | chr3:1549692-1549872 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 90 |
| Conread position: | 407-588 |
| Cow position: | chr3:21282816-21282992 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 407-588 |
| Cow position: | chr3:27346981-27346802 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 407-588 |
| Cow position: | chr3:27633629-27633443 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 407-588 |
| Cow position: | chr3:31286522-31286344 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 407-588 |
| Cow position: | chr3:31528213-31528384 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 407-588 |
| Cow position: | chr3:34165261-34165092 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 407-588 |
| Cow position: | chr3:43004424-43004241 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 407-588 |
| Cow position: | chr3:52817382-52817563 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-588 |
| Cow position: | chr3:55107036-55106858 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 407-588 |
| Cow position: | chr3:68127474-68127648 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 407-588 |
| Cow position: | chr3:77468334-77468521 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 407-588 |
| Cow position: | chr3:77589770-77589945 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 407-588 |
| Cow position: | chr3:82543895-82544066 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 407-588 |
| Cow position: | chr3:85086230-85086400 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 408-550 |
| Cow position: | chr3:73418431-73418583 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 408-579 |
| Cow position: | chr3:32773575-32773748 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 408-587 |
| Cow position: | chr3:78442506-78442326 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 409-588 |
| Cow position: | chr3:49414366-49414190 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 410-583 |
| Cow position: | chr3:63334331-63334155 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 410-587 |
| Cow position: | chr3:21332430-21332259 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 410-588 |
| Cow position: | chr3:2285069-2285247 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 410-588 |
| Cow position: | chr3:23274585-23274410 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 77, 50 |
| Conread position: | 410-588 |
| Cow position: | chr3:26581693-26581509 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 410-588 |
| Cow position: | chr3:74724059-74723877 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 150 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 411-585 |
| Cow position: | chr3:60854459-60854287 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 24, 108 |
| Conread position: | 411-588 |
| Cow position: | chr3:17519408-17519236 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 413-585 |
| Cow position: | chr3:36538510-36538333 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 97, 6 |
| Conread position: | 418-587 |
| Cow position: | chr3:74436303-74436469 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 420-588 |
| Cow position: | chr3:41860968-41860801 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 149, 68 |
| Conread position: | 427-564 |
| Cow position: | chr3:4615464-4615603 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 427-588 |
| Cow position: | chr3:56042323-56042167 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 118, 69 |
| Conread position: | 429-584 |
| Cow position: | chr3:45641904-45642050 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 17 |
| Conread position: | 432-586 |
| Cow position: | chr3:83393127-83392971 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 441-586 |
| Cow position: | chr3:18851799-18851936 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 445-588 |
| Cow position: | chr3:8753873-8754016 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 450-588 |
| Cow position: | chr3:22054213-22054075 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-588 |
| Cow position: | chr3:77158835-77158955 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
Show alignments to all cow chromosomes.