Cow genome map

Conread name: Ss1.1-rpigcf0_008825.5

Conread position: 1-319
Cow position:
Alignm length: 345
Alignm identity: 240
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 11, 123

Conread position: 9-298
Cow position:
Alignm length: 307
Alignm identity: 204
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 119

Conread position: 9-298
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 32, 112

Conread position: 9-317
Cow position:
Alignm length: 325
Alignm identity: 221
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 30, 121

Conread position: 9-319
Cow position:
Alignm length: 320
Alignm identity: 227
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 34

Conread position: 9-319
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 9

Conread position: 9-319
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 28

Conread position: 15-302
Cow position:
Alignm length: 299
Alignm identity: 197
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 29

Conread position: 33-294
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 10

Conread position: 43-290
Cow position:
Alignm length: 258
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 64

Conread position: 43-291
Cow position:
Alignm length: 255
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 121

Conread position: 43-291
Cow position:
Alignm length: 256
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 59

Conread position: 43-292
Cow position:
Alignm length: 255
Alignm identity: 173
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 29, 56

Conread position: 43-298
Cow position:
Alignm length: 262
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 41

Conread position: 43-298
Cow position:
Alignm length: 263
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 114

Conread position: 43-298
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 167, 36

Conread position: 43-299
Cow position:
Alignm length: 264
Alignm identity: 176
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 18

Conread position: 43-317
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 69

Conread position: 49-299
Cow position:
Alignm length: 260
Alignm identity: 177
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 53

Conread position: 54-298
Cow position:
Alignm length: 251
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 59

Conread position: 55-298
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 15, 58

Conread position: 61-290
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 41

Conread position: 61-292
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 41

Conread position: 61-292
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 41

Conread position: 63-319
Cow position:
Alignm length: 263
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 50

Conread position: 80-298
Cow position:
Alignm length: 221
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 7

Conread position: 82-300
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 5

Conread position: 87-272
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-290
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 10

Conread position: 87-290
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 10

Conread position: 87-291
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-291
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-292
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 72, 12

Conread position: 87-298
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 10

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 12

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 10

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 213
Alignm identity: 144
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 118, 21

Conread position: 87-298
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-299
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 10

Conread position: 87-319
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 72, 10

Conread position: 90-303
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 21

Conread position: 104-298
Cow position:
Alignm length: 197
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 39

Conread position: 111-300
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 95, 41

Conread position: 111-319
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 94

Conread position: 158-318
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 40

Conread position: 400-583
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 157, 20

Conread position: 406-546
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 406-579
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 44

Conread position: 406-587
Cow position:
Alignm length: 184
Alignm identity: 147
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 41

Conread position: 406-587
Cow position:
Alignm length: 183
Alignm identity: 146
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 407-532
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 43

Conread position: 407-571
Cow position:
Alignm length: 166
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 127

Conread position: 407-574
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 17

Conread position: 407-576
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 77

Conread position: 407-579
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 33

Conread position: 407-583
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 407-584
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 407-585
Cow position:
Alignm length: 179
Alignm identity: 147
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 407-586
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 74

Conread position: 407-586
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 407-586
Cow position:
Alignm length: 182
Alignm identity: 144
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 121, 157

Conread position: 407-587
Cow position:
Alignm length: 186
Alignm identity: 148
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 24, 54

Conread position: 407-587
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 407-587
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 407-588
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 90

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 407-588
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 32, 54

Conread position: 407-588
Cow position:
Alignm length: 187
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 407-588
Cow position:
Alignm length: 185
Alignm identity: 149
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 21, 92

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 407-588
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 8

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 407-588
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 87

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 408-550
Cow position:
Alignm length: 153
Alignm identity: 122
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 408-579
Cow position:
Alignm length: 174
Alignm identity: 138
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 408-587
Cow position:
Alignm length: 183
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 86

Conread position: 409-588
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 16

Conread position: 410-583
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 71

Conread position: 410-587
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 0

Conread position: 410-588
Cow position:
Alignm length: 180
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 27, 140

Conread position: 410-588
Cow position:
Alignm length: 180
Alignm identity: 145
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 77, 50

Conread position: 410-588
Cow position:
Alignm length: 185
Alignm identity: 151
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 410-588
Cow position:
Alignm length: 183
Alignm identity: 150
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 411-585
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 108

Conread position: 411-588
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 86

Conread position: 413-585
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 6

Conread position: 418-587
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 31

Conread position: 420-588
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 149, 68

Conread position: 427-564
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 427-588
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 118, 69

Conread position: 429-584
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 17

Conread position: 432-586
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 441-586
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 445-588
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 450-588
Cow position:
Alignm length: 139
Alignm identity: 114
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 467-588
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 114, 0

Show alignments to all cow chromosomes.