Cow genome map


           Conread name:
           Ss1.1-rpigcf0_008825.5
        

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               9, 149
               

               Conread position:
               9-236
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 116
               

               Conread position:
               9-246
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 112
               

               Conread position:
               9-266
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               9-298
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               61, 34
               

               Conread position:
               9-319
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               33, 105
               

               Conread position:
               17-299
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               20-292
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               6, 88
               

               Conread position:
               33-298
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               40-315
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 216
               

               Conread position:
               43-280
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               30, 68
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 66
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               43-319
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               56-299
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               14, 56
               

               Conread position:
               76-317
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               86-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               86-319
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               126, 22
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 10
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               87-321
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               111-298
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               118-319
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               88, 50
               

               Conread position:
               407-510
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               407-570
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 69
               

               Conread position:
               407-576
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               407-584
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               407-585
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               24, 113
               

               Conread position:
               407-585
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               20, 83
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               111, 32
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               148
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               80, 17
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               14, 37
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               24, 108
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               408-551
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               408-586
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               37, 109
               

               Conread position:
               409-588
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               410-554
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               410-584
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               23, 151
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               419-586
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               420-582
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               426-586
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               427-588
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-588
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               432-588
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-588
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               441-571
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               441-584
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               441-587
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               451-570
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               451-584
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               460-576
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               467-588
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               498-588
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.