Cow genome map


           Conread name:
           Ss1.1-rpigcf0_008825.5
        

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               9, 124
               

               Conread position:
               8-284
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               35, 115
               

               Conread position:
               9-297
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 107
               

               Conread position:
               9-319
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 112
               

               Conread position:
               38-292
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               32, 7
               

               Conread position:
               43-291
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 107
               

               Conread position:
               43-291
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 63
               

               Conread position:
               43-292
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               28, 59
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 113
               

               Conread position:
               43-298
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 113
               

               Conread position:
               43-299
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 64
               

               Conread position:
               43-300
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 62
               

               Conread position:
               43-319
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               44-298
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               31, 72
               

               Conread position:
               48-319
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               61-292
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               61-292
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               61-300
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               84-321
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               86-287
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               86-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               119, 22
               

               Conread position:
               87-291
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-293
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-299
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-309
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               117, 20
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               90-277
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               93-296
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               95-263
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               108, 13
               

               Conread position:
               108-298
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               111-292
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               111-292
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               406-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               406-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               406-588
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 67
               

               Conread position:
               407-556
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               407-559
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               407-570
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               36, 92
               

               Conread position:
               407-581
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 99
               

               Conread position:
               407-584
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               32, 127
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               24, 115
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               26, 112
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               24, 138
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               24, 105
               

               Conread position:
               408-561
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               408-586
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 69
               

               Conread position:
               410-580
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               142
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               411-586
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               42, 78
               

               Conread position:
               411-588
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               423-584
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               427-588
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-582
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               432-585
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               432-588
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 140
               

               Conread position:
               433-586
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               434-588
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               435-579
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               440-567
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               440-588
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               441-584
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               441-588
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               441-588
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               442-587
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               27, 74
               

               Conread position:
               442-588
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               445-586
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 70
               

               Conread position:
               445-588
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               448-588
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               450-586
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               452-584
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               459-588
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               459-588
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               462-587
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               463-588
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.