Cow genome map


           Conread name:
           Ss1.1-rpigcf0_008825.5
        

               Conread position:
               1-259
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               9, 108
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               9, 121
               

               Conread position:
               1-298
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               9, 121
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 120
               

               Conread position:
               8-287
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               8-298
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               9-292
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               11-300
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 107
               

               Conread position:
               43-319
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 66
               

               Conread position:
               45-314
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               25, 61
               

               Conread position:
               48-314
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               49-311
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 71
               

               Conread position:
               60-296
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 30
               

               Conread position:
               60-298
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 46
               

               Conread position:
               61-292
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               61-292
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               61-292
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               61-292
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               61-298
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 39
               

               Conread position:
               69-273
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               87-272
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-290
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 10
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-292
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-298
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 13
               

               Conread position:
               87-300
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               87-319
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               87-325
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               87-330
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               88-298
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 9
               

               Conread position:
               104-317
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 199
               

               Conread position:
               111-298
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               400-588
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               33, 183
               

               Conread position:
               406-584
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 80
               

               Conread position:
               406-587
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 45
               

               Conread position:
               406-588
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               407-551
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               407-557
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               26, 61
               

               Conread position:
               407-575
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               407-583
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               407-585
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               407-585
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               407-585
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               407-586
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               407-587
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               24, 127
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               14, 118
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               407-588
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               408-587
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 31
               

               Conread position:
               408-587
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               23, 65
               

               Conread position:
               408-587
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               25, 90
               

               Conread position:
               408-588
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               410-588
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               413-585
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               413-588
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               415-588
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               111, 50
               

               Conread position:
               418-588
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               164, 21
               

               Conread position:
               420-573
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               424-588
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               432-588
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               432-588
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               433-588
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               434-561
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               434-585
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               442-588
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               448-571
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               449-585
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               450-583
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               450-584
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               459-584
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               462-587
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               467-588
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               468-584
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               489-588
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 0
               
Show alignments to all cow chromosomes.