Cow genome map

Conread name: Ss1.1-rpigcf0_008825.5

Conread position: 1-314
Cow position:
Alignm length: 335
Alignm identity: 219
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 121

Conread position: 6-298
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 108

Conread position: 9-260
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 109

Conread position: 9-271
Cow position:
Alignm length: 282
Alignm identity: 202
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 22, 116

Conread position: 9-273
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 87

Conread position: 9-311
Cow position:
Alignm length: 309
Alignm identity: 207
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 67, 34

Conread position: 9-315
Cow position:
Alignm length: 322
Alignm identity: 209
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 33, 112

Conread position: 9-319
Cow position:
Alignm length: 323
Alignm identity: 228
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 206

Conread position: 9-319
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 34

Conread position: 13-314
Cow position:
Alignm length: 306
Alignm identity: 194
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 32

Conread position: 33-273
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 80

Conread position: 40-312
Cow position:
Alignm length: 280
Alignm identity: 181
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 71

Conread position: 43-288
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 22, 74

Conread position: 43-292
Cow position:
Alignm length: 260
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 62

Conread position: 43-298
Cow position:
Alignm length: 265
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 66

Conread position: 43-298
Cow position:
Alignm length: 263
Alignm identity: 171
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 56

Conread position: 43-298
Cow position:
Alignm length: 259
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 41

Conread position: 43-319
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 73

Conread position: 48-298
Cow position:
Alignm length: 253
Alignm identity: 168
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 145, 39

Conread position: 48-299
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 64

Conread position: 61-292
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 52

Conread position: 61-301
Cow position:
Alignm length: 248
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 43

Conread position: 87-290
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 21

Conread position: 87-291
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 10

Conread position: 87-291
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 12

Conread position: 87-292
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-292
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-294
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 10

Conread position: 87-298
Cow position:
Alignm length: 213
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 21

Conread position: 87-298
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 213
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 12

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 12

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 12

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 118, 10

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 12

Conread position: 87-298
Cow position:
Alignm length: 213
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 118, 10

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 21

Conread position: 87-298
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 12

Conread position: 87-299
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 10

Conread position: 87-302
Cow position:
Alignm length: 218
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 10

Conread position: 87-309
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 10

Conread position: 87-319
Cow position:
Alignm length: 235
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 21

Conread position: 87-319
Cow position:
Alignm length: 235
Alignm identity: 155
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 12

Conread position: 87-319
Cow position:
Alignm length: 237
Alignm identity: 159
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 10

Conread position: 87-319
Cow position:
Alignm length: 235
Alignm identity: 156
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-319
Cow position:
Alignm length: 235
Alignm identity: 155
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 10

Conread position: 87-319
Cow position:
Alignm length: 235
Alignm identity: 156
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 87-319
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 87-319
Cow position:
Alignm length: 235
Alignm identity: 157
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 72, 10

Conread position: 88-298
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 54, 10

Conread position: 88-319
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 10

Conread position: 111-294
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 32

Conread position: 111-298
Cow position:
Alignm length: 190
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 41

Conread position: 111-298
Cow position:
Alignm length: 190
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 41

Conread position: 160-300
Cow position:
Alignm length: 142
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 406-576
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 44

Conread position: 406-583
Cow position:
Alignm length: 179
Alignm identity: 145
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 25, 50

Conread position: 406-588
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 5

Conread position: 406-588
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 20, 52

Conread position: 407-535
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 80

Conread position: 407-570
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 98

Conread position: 407-579
Cow position:
Alignm length: 173
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 407-582
Cow position:
Alignm length: 183
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 162

Conread position: 407-584
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 407-584
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 407-585
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 407-586
Cow position:
Alignm length: 184
Alignm identity: 148
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 26, 86

Conread position: 407-587
Cow position:
Alignm length: 186
Alignm identity: 153
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 117

Conread position: 407-587
Cow position:
Alignm length: 181
Alignm identity: 150
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 407-587
Cow position:
Alignm length: 181
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 407-588
Cow position:
Alignm length: 186
Alignm identity: 148
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 130

Conread position: 407-588
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 26, 137

Conread position: 407-588
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 26, 171

Conread position: 407-588
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 10

Conread position: 407-588
Cow position:
Alignm length: 184
Alignm identity: 147
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 24, 93

Conread position: 407-588
Cow position:
Alignm length: 183
Alignm identity: 149
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 63

Conread position: 407-588
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 131, 32

Conread position: 407-588
Cow position:
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 32

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 146
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 147
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 30, 0

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 146
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 407-588
Cow position:
Alignm length: 182
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 407-588
Cow position:
Alignm length: 185
Alignm identity: 150
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 19, 63

Conread position: 407-588
Cow position:
Alignm length: 185
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 101

Conread position: 407-588
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 51

Conread position: 408-587
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 409-582
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 89

Conread position: 409-584
Cow position:
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 409-587
Cow position:
Alignm length: 179
Alignm identity: 143
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 410-586
Cow position:
Alignm length: 178
Alignm identity: 144
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 16, 0

Conread position: 410-587
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 23, 105

Conread position: 410-588
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 87

Conread position: 410-588
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 138, 31

Conread position: 418-561
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 427-575
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 13, 132

Conread position: 427-588
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 432-584
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 137, 18

Conread position: 432-586
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 432-587
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 437-587
Cow position:
Alignm length: 151
Alignm identity: 124
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 441-588
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 95

Conread position: 448-576
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 448-588
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 462-584
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 462-588
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.