Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rpigcf0_010852.5
        

               Conread position:
               47-228
               

               Cow position:
               chr1:62964216-62964401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 16
               

               Conread position:
               49-230
               

               Cow position:
               chr1:3815732-3815549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               53-333
               

               Cow position:
               chr1:89342027-89341747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               55-226
               

               Cow position:
               chr1:75744821-75744996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               55-273
               

               Cow position:
               chr1:27380421-27380635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               59-218
               

               Cow position:
               chr1:97090289-97090450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               59-225
               

               Cow position:
               chr1:89448864-89449032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               59-226
               

               Cow position:
               chr1:24133096-24132930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 71
               

               Conread position:
               59-226
               

               Cow position:
               chr1:37322034-37321870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 81
               

               Conread position:
               59-226
               

               Cow position:
               chr1:81569065-81568896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               59-228
               

               Cow position:
               chr1:46764840-46765011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               39, 128
               

               Conread position:
               60-330
               

               Cow position:
               chr1:3790102-3789827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               176, 79
               

               Conread position:
               63-217
               

               Cow position:
               chr1:852136-852293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               63-218
               

               Cow position:
               chr1:92996921-92996767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               64-217
               

               Cow position:
               chr1:47402497-47402651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 113
               

               Conread position:
               64-230
               

               Cow position:
               chr1:16061034-16060869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               64-316
               

               Cow position:
               chr1:79087891-79087646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               64-330
               

               Cow position:
               chr1:64328889-64329137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               18, 69
               

               Conread position:
               65-209
               

               Cow position:
               chr1:37309551-37309404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               65-215
               

               Cow position:
               chr1:5751284-5751434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               65-222
               

               Cow position:
               chr1:65028503-65028659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 144
               

               Conread position:
               65-223
               

               Cow position:
               chr1:43505501-43505658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               65-223
               

               Cow position:
               chr1:102349777-102349623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               65-224
               

               Cow position:
               chr1:57575794-57575633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               65-224
               

               Cow position:
               chr1:62034859-62034699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               9, 97
               

               Conread position:
               65-225
               

               Cow position:
               chr1:4032602-4032763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               65-225
               

               Cow position:
               chr1:31357538-31357378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               65-225
               

               Cow position:
               chr1:47790692-47790535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               32, 100
               

               Conread position:
               65-225
               

               Cow position:
               chr1:57420760-57420605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               65-226
               

               Cow position:
               chr1:2462356-2462507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               65-226
               

               Cow position:
               chr1:80422247-80422404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               65-231
               

               Cow position:
               chr1:3923830-3923663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               65-240
               

               Cow position:
               chr1:98897723-98897549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               65-260
               

               Cow position:
               chr1:77880760-77880571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               65-322
               

               Cow position:
               chr1:98511895-98512134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               13, 127
               

               Conread position:
               65-333
               

               Cow position:
               chr1:83084536-83084800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 55
               

               Conread position:
               66-217
               

               Cow position:
               chr1:54258538-54258689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               32, 99
               

               Conread position:
               66-330
               

               Cow position:
               chr1:95153195-95153450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               67-225
               

               Cow position:
               chr1:55229948-55230107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               68-213
               

               Cow position:
               chr1:21823335-21823481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               68-225
               

               Cow position:
               chr1:8287658-8287500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               7, 123
               

               Conread position:
               69-225
               

               Cow position:
               chr1:87095240-87095083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               69-230
               

               Cow position:
               chr1:42887304-42887141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               69-230
               

               Cow position:
               chr1:72813591-72813752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               69-333
               

               Cow position:
               chr1:23512686-23512398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               12, 115
               

               Conread position:
               70-203
               

               Cow position:
               chr1:39427031-39426896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               70-204
               

               Cow position:
               chr1:63434830-63434696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               29, 7
               

               Conread position:
               70-206
               

               Cow position:
               chr1:97144491-97144354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               70-209
               

               Cow position:
               chr1:95215216-95215075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               70-213
               

               Cow position:
               chr1:97962619-97962762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               70-214
               

               Cow position:
               chr1:7971386-7971532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               70-216
               

               Cow position:
               chr1:78809852-78809998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-218
               

               Cow position:
               chr1:49433289-49433140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               70-219
               

               Cow position:
               chr1:6941435-6941593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               70-219
               

               Cow position:
               chr1:6958848-6959006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               70-221
               

               Cow position:
               chr1:93810401-93810556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               70-225
               

               Cow position:
               chr1:72422433-72422278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               28, 89
               

               Conread position:
               70-225
               

               Cow position:
               chr1:84104086-84103930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               70-226
               

               Cow position:
               chr1:31256246-31256094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               70-226
               

               Cow position:
               chr1:69695020-69694862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               9, 56
               

               Conread position:
               70-226
               

               Cow position:
               chr1:84255742-84255899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               70-228
               

               Cow position:
               chr1:68817822-68817665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               16, 21
               

               Conread position:
               70-230
               

               Cow position:
               chr1:84768904-84768743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               70-241
               

               Cow position:
               chr1:65881781-65881952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 88
               

               Conread position:
               70-250
               

               Cow position:
               chr1:33996949-33996768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               70-276
               

               Cow position:
               chr1:76436455-76436661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 195
               

               Conread position:
               70-317
               

               Cow position:
               chr1:96599316-96599067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 54
               

               Conread position:
               70-324
               

               Cow position:
               chr1:54732510-54732258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               70-330
               

               Cow position:
               chr1:85712415-85712666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 125
               

               Conread position:
               70-330
               

               Cow position:
               chr1:92684720-92684476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               29, 138
               

               Conread position:
               70-333
               

               Cow position:
               chr1:45007439-45007721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 252
               

               Conread position:
               71-205
               

               Cow position:
               chr1:26159269-26159143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               71-210
               

               Cow position:
               chr1:72286092-72285952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               71-213
               

               Cow position:
               chr1:37726444-37726300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               71-217
               

               Cow position:
               chr1:91811758-91811902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 51
               

               Conread position:
               71-219
               

               Cow position:
               chr1:86578941-86579087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               28, 69
               

               Conread position:
               71-223
               

               Cow position:
               chr1:15333873-15334020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               71-224
               

               Cow position:
               chr1:21787312-21787466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               71-224
               

               Cow position:
               chr1:64113815-64113661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               27, 141
               

               Conread position:
               71-224
               

               Cow position:
               chr1:89381252-89381405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 17
               

               Conread position:
               71-225
               

               Cow position:
               chr1:22729032-22729187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               71-225
               

               Cow position:
               chr1:28176985-28177135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               71-225
               

               Cow position:
               chr1:67654344-67654188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               71-225
               

               Cow position:
               chr1:71916143-71915989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               27, 51
               

               Conread position:
               71-225
               

               Cow position:
               chr1:86073572-86073727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               71-226
               

               Cow position:
               chr1:11729152-11729307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               71-226
               

               Cow position:
               chr1:15547448-15547602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               71-226
               

               Cow position:
               chr1:31272466-31272311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               26, 137
               

               Conread position:
               71-226
               

               Cow position:
               chr1:49825090-49824932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               71-226
               

               Cow position:
               chr1:62997775-62997928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               28, 59
               

               Conread position:
               71-226
               

               Cow position:
               chr1:63530534-63530692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               71-226
               

               Cow position:
               chr1:95618617-95618774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               71-228
               

               Cow position:
               chr1:43872343-43872186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 15
               

               Conread position:
               71-228
               

               Cow position:
               chr1:99609347-99609502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               71-230
               

               Cow position:
               chr1:3323844-3324007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 122
               

               Conread position:
               71-237
               

               Cow position:
               chr1:84203490-84203654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 67
               

               Conread position:
               71-240
               

               Cow position:
               chr1:88359854-88360024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               71-280
               

               Cow position:
               chr1:54478305-54478512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 144
               

               Conread position:
               71-297
               

               Cow position:
               chr1:18780358-18780128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               29, 151
               

               Conread position:
               71-318
               

               Cow position:
               chr1:81913175-81912949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               27, 64
               

               Conread position:
               71-330
               

               Cow position:
               chr1:11226270-11226024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               27, 96
               

               Conread position:
               71-330
               

               Cow position:
               chr1:58036995-58037264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 76
               

               Conread position:
               72-198
               

               Cow position:
               chr1:56635076-56635202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-199
               

               Cow position:
               chr1:45288894-45288766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               72-201
               

               Cow position:
               chr1:75141974-75142104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               72-201
               

               Cow position:
               chr1:81355728-81355596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-204
               

               Cow position:
               chr1:4581353-4581220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-204
               

               Cow position:
               chr1:44506948-44507083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               72-205
               

               Cow position:
               chr1:724717-724851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               72-205
               

               Cow position:
               chr1:19482104-19481971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 126
               

               Conread position:
               72-205
               

               Cow position:
               chr1:81868752-81868619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 126
               

               Conread position:
               72-210
               

               Cow position:
               chr1:5006139-5006277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 78
               

               Conread position:
               72-210
               

               Cow position:
               chr1:30504478-30504617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-211
               

               Cow position:
               chr1:53425153-53425294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-212
               

               Cow position:
               chr1:19515642-19515501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-212
               

               Cow position:
               chr1:31390612-31390470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               72-214
               

               Cow position:
               chr1:45223558-45223701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-215
               

               Cow position:
               chr1:81629871-81629729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 123
               

               Conread position:
               72-216
               

               Cow position:
               chr1:22192746-22192891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               72-216
               

               Cow position:
               chr1:39510080-39509936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               72-217
               

               Cow position:
               chr1:5135733-5135587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               72-217
               

               Cow position:
               chr1:42178717-42178868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               72-217
               

               Cow position:
               chr1:55428980-55428833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-217
               

               Cow position:
               chr1:81582090-81582237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 121
               

               Conread position:
               72-217
               

               Cow position:
               chr1:87936875-87937020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               72-218
               

               Cow position:
               chr1:65318552-65318698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 123
               

               Conread position:
               72-219
               

               Cow position:
               chr1:30418064-30417923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               72-219
               

               Cow position:
               chr1:81613366-81613514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-221
               

               Cow position:
               chr1:5637082-5636930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-222
               

               Cow position:
               chr1:73721337-73721489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               24, 130
               

               Conread position:
               72-222
               

               Cow position:
               chr1:76019717-76019570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 64
               

               Conread position:
               72-223
               

               Cow position:
               chr1:7739925-7740076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 65
               

               Conread position:
               72-223
               

               Cow position:
               chr1:85550101-85549950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               26, 135
               

               Conread position:
               72-224
               

               Cow position:
               chr1:21093094-21093246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 115
               

               Conread position:
               72-224
               

               Cow position:
               chr1:27881587-27881736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               25, 68
               

               Conread position:
               72-224
               

               Cow position:
               chr1:72105389-72105536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               72-224
               

               Cow position:
               chr1:101507337-101507489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 118
               

               Conread position:
               72-225
               

               Cow position:
               chr1:31934484-31934638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 123
               

               Conread position:
               72-225
               

               Cow position:
               chr1:36688401-36688248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 119
               

               Conread position:
               72-225
               

               Cow position:
               chr1:41027052-41027206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 58
               

               Conread position:
               72-225
               

               Cow position:
               chr1:43389070-43388921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               72-225
               

               Cow position:
               chr1:53374411-53374558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               72-225
               

               Cow position:
               chr1:59518899-59519045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               21, 59
               

               Conread position:
               72-225
               

               Cow position:
               chr1:60986965-60987120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-225
               

               Cow position:
               chr1:67529032-67529186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-225
               

               Cow position:
               chr1:81481405-81481251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-225
               

               Cow position:
               chr1:90904778-90904625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               72-225
               

               Cow position:
               chr1:93554813-93554969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               72-225
               

               Cow position:
               chr1:94226577-94226424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               72-225
               

               Cow position:
               chr1:95835821-95835667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-225
               

               Cow position:
               chr1:100474211-100474365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-226
               

               Cow position:
               chr1:6731158-6731312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-226
               

               Cow position:
               chr1:26894999-26894840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               72-226
               

               Cow position:
               chr1:51394395-51394549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 132
               

               Conread position:
               72-226
               

               Cow position:
               chr1:53308412-53308262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 78
               

               Conread position:
               72-226
               

               Cow position:
               chr1:54156757-54156601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               72-226
               

               Cow position:
               chr1:61741990-61741836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 68
               

               Conread position:
               72-226
               

               Cow position:
               chr1:61884890-61885043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 134
               

               Conread position:
               72-226
               

               Cow position:
               chr1:64302267-64302110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               72-226
               

               Cow position:
               chr1:70538588-70538743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-226
               

               Cow position:
               chr1:78096904-78097059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               72-226
               

               Cow position:
               chr1:78857352-78857197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               72-226
               

               Cow position:
               chr1:80841624-80841778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               72-226
               

               Cow position:
               chr1:81290484-81290637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 72
               

               Conread position:
               72-226
               

               Cow position:
               chr1:101834796-101834948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               72-227
               

               Cow position:
               chr1:67688605-67688450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 80
               

               Conread position:
               72-228
               

               Cow position:
               chr1:1956356-1956201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               72-228
               

               Cow position:
               chr1:84811962-84811806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 139
               

               Conread position:
               72-229
               

               Cow position:
               chr1:56477569-56477726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 155
               

               Conread position:
               72-230
               

               Cow position:
               chr1:99642390-99642234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               72-230
               

               Cow position:
               chr1:101866519-101866362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               72-232
               

               Cow position:
               chr1:43352677-43352518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               26, 48
               

               Conread position:
               72-232
               

               Cow position:
               chr1:53520888-53521053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               72-232
               

               Cow position:
               chr1:73020685-73020524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               72-233
               

               Cow position:
               chr1:78697793-78697632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               72-234
               

               Cow position:
               chr1:96081457-96081620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               26, 98
               

               Conread position:
               72-235
               

               Cow position:
               chr1:30189127-30189293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               25, 61
               

               Conread position:
               72-235
               

               Cow position:
               chr1:82337799-82337639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 59
               

               Conread position:
               72-239
               

               Cow position:
               chr1:52912919-52912753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               21, 16
               

               Conread position:
               72-239
               

               Cow position:
               chr1:98413749-98413917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               72-241
               

               Cow position:
               chr1:500152-500322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               72-241
               

               Cow position:
               chr1:71796333-71796165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 73
               

               Conread position:
               72-242
               

               Cow position:
               chr1:9143699-9143866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               25, 59
               

               Conread position:
               72-242
               

               Cow position:
               chr1:24778012-24777845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               72-248
               

               Cow position:
               chr1:25281680-25281502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               72-262
               

               Cow position:
               chr1:97938940-97939125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               72-280
               

               Cow position:
               chr1:75382958-75383159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               72-281
               

               Cow position:
               chr1:90868464-90868261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               26, 118
               

               Conread position:
               72-316
               

               Cow position:
               chr1:48730852-48730617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               72-326
               

               Cow position:
               chr1:36932133-36932397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               146, 42
               

               Conread position:
               72-329
               

               Cow position:
               chr1:67305262-67305006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               72-329
               

               Cow position:
               chr1:98576025-98576278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               72-330
               

               Cow position:
               chr1:14106641-14106403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               72-330
               

               Cow position:
               chr1:21835912-21836166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               72-330
               

               Cow position:
               chr1:39068979-39068707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               26, 241
               

               Conread position:
               72-330
               

               Cow position:
               chr1:69264787-69265032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 43
               

               Conread position:
               72-330
               

               Cow position:
               chr1:77892116-77892372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 67
               

               Conread position:
               72-330
               

               Cow position:
               chr1:95676312-95676043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               145, 131
               

               Conread position:
               72-331
               

               Cow position:
               chr1:48214178-48213939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               25, 68
               

               Conread position:
               72-331
               

               Cow position:
               chr1:50991910-50992165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 139
               

               Conread position:
               72-331
               

               Cow position:
               chr1:52995001-52995256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               27, 151
               

               Conread position:
               72-331
               

               Cow position:
               chr1:71253576-71253328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               27, 58
               

               Conread position:
               72-331
               

               Cow position:
               chr1:98551697-98551938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               26, 124
               

               Conread position:
               72-333
               

               Cow position:
               chr1:42537346-42537093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 116
               

               Conread position:
               72-333
               

               Cow position:
               chr1:98594550-98594799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 40
               

               Conread position:
               72-337
               

               Cow position:
               chr1:86340487-86340243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               72-341
               

               Cow position:
               chr1:8624472-8624210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               25, 118
               

               Conread position:
               73-192
               

               Cow position:
               chr1:78079697-78079817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               73-200
               

               Cow position:
               chr1:102346058-102345929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 67
               

               Conread position:
               73-201
               

               Cow position:
               chr1:19227079-19226950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               73-205
               

               Cow position:
               chr1:83072419-83072552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               73-205
               

               Cow position:
               chr1:85647802-85647671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               26, 114
               

               Conread position:
               73-212
               

               Cow position:
               chr1:64804124-64803984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               73-213
               

               Cow position:
               chr1:26427883-26427742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               73-213
               

               Cow position:
               chr1:31499603-31499744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               73-215
               

               Cow position:
               chr1:2976017-2975871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               73-215
               

               Cow position:
               chr1:42138836-42138979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               73-216
               

               Cow position:
               chr1:52435250-52435394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               73-218
               

               Cow position:
               chr1:3352720-3352576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 56
               

               Conread position:
               73-222
               

               Cow position:
               chr1:66752651-66752501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               73-223
               

               Cow position:
               chr1:90621528-90621376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               73-223
               

               Cow position:
               chr1:94261515-94261664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               73-224
               

               Cow position:
               chr1:68826926-68826782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 55
               

               Conread position:
               73-224
               

               Cow position:
               chr1:89742022-89741865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               73-224
               

               Cow position:
               chr1:100551948-100552105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               73-225
               

               Cow position:
               chr1:4291144-4291295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 68
               

               Conread position:
               73-225
               

               Cow position:
               chr1:57089701-57089550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 106
               

               Conread position:
               73-225
               

               Cow position:
               chr1:71119498-71119650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 108
               

               Conread position:
               73-225
               

               Cow position:
               chr1:73960681-73960831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               24, 91
               

               Conread position:
               73-225
               

               Cow position:
               chr1:88913298-88913450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 79
               

               Conread position:
               73-225
               

               Cow position:
               chr1:90976110-90975956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               26, 122
               

               Conread position:
               73-226
               

               Cow position:
               chr1:22035590-22035743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               73-226
               

               Cow position:
               chr1:22525856-22526011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               73-226
               

               Cow position:
               chr1:22730712-22730866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               25, 135
               

               Conread position:
               73-226
               

               Cow position:
               chr1:28470804-28470962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               73-226
               

               Cow position:
               chr1:42868958-42868808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               73-226
               

               Cow position:
               chr1:50930997-50930847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 41
               

               Conread position:
               73-226
               

               Cow position:
               chr1:51445866-51446018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               73-226
               

               Cow position:
               chr1:54157272-54157428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               73-226
               

               Cow position:
               chr1:62036781-62036935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               73-226
               

               Cow position:
               chr1:69481970-69481818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 130
               

               Conread position:
               73-228
               

               Cow position:
               chr1:10778541-10778697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               73-232
               

               Cow position:
               chr1:45555344-45555503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               25, 122
               

               Conread position:
               73-232
               

               Cow position:
               chr1:73936167-73936006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               73-240
               

               Cow position:
               chr1:13414009-13414170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 69
               

               Conread position:
               73-240
               

               Cow position:
               chr1:53458676-53458839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               73-240
               

               Cow position:
               chr1:101177493-101177661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 92
               

               Conread position:
               73-241
               

               Cow position:
               chr1:96273044-96272881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               73-242
               

               Cow position:
               chr1:10716476-10716644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               73-245
               

               Cow position:
               chr1:21955394-21955223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               144, 116
               

               Conread position:
               73-293
               

               Cow position:
               chr1:68672619-68672399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               24, 46
               

               Conread position:
               73-304
               

               Cow position:
               chr1:48581107-48581335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               20, 105
               

               Conread position:
               73-311
               

               Cow position:
               chr1:48769780-48770036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               73-320
               

               Cow position:
               chr1:98708613-98708843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 45
               

               Conread position:
               73-326
               

               Cow position:
               chr1:24445649-24445378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 55
               

               Conread position:
               73-326
               

               Cow position:
               chr1:57297460-57297709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               30, 139
               

               Conread position:
               73-330
               

               Cow position:
               chr1:8347101-8347357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 182
               

               Conread position:
               73-330
               

               Cow position:
               chr1:80336271-80336012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               24, 234
               

               Conread position:
               73-330
               

               Cow position:
               chr1:85162569-85162323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 143
               

               Conread position:
               73-333
               

               Cow position:
               chr1:40531122-40530877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               73-345
               

               Cow position:
               chr1:84010750-84011008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 96
               

               Conread position:
               74-201
               

               Cow position:
               chr1:64678673-64678802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               74-203
               

               Cow position:
               chr1:101634692-101634821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               74-204
               

               Cow position:
               chr1:89349944-89350075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               74-205
               

               Cow position:
               chr1:70434978-70435108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               74-206
               

               Cow position:
               chr1:61542939-61542807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               74-213
               

               Cow position:
               chr1:6826317-6826180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               74-213
               

               Cow position:
               chr1:62235467-62235328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               74-217
               

               Cow position:
               chr1:34856649-34856505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               74-217
               

               Cow position:
               chr1:53370064-53370206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               24, 46
               

               Conread position:
               74-218
               

               Cow position:
               chr1:24406918-24406773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               74-218
               

               Cow position:
               chr1:56225764-56225908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 134
               

               Conread position:
               74-219
               

               Cow position:
               chr1:3914939-3914794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               23, 58
               

               Conread position:
               74-219
               

               Cow position:
               chr1:82880625-82880769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               74-222
               

               Cow position:
               chr1:6972508-6972654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               74-223
               

               Cow position:
               chr1:52662193-52662045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 31
               

               Conread position:
               74-223
               

               Cow position:
               chr1:101632358-101632207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               74-225
               

               Cow position:
               chr1:7023100-7023252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               74-225
               

               Cow position:
               chr1:55753236-55753085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 38
               

               Conread position:
               74-225
               

               Cow position:
               chr1:68127211-68127058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               74-225
               

               Cow position:
               chr1:72068856-72068703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               74-226
               

               Cow position:
               chr1:20864036-20864185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               74-226
               

               Cow position:
               chr1:36875009-36875158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               74-226
               

               Cow position:
               chr1:43312052-43311899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               74-226
               

               Cow position:
               chr1:56225448-56225602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               9, 15
               

               Conread position:
               74-226
               

               Cow position:
               chr1:67919114-67919267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               74-226
               

               Cow position:
               chr1:71078981-71078829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               24, 131
               

               Conread position:
               74-226
               

               Cow position:
               chr1:93528678-93528833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               19, 46
               

               Conread position:
               74-228
               

               Cow position:
               chr1:42541577-42541731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 143
               

               Conread position:
               74-231
               

               Cow position:
               chr1:101268022-101267867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               74-232
               

               Cow position:
               chr1:79660423-79660264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               74-238
               

               Cow position:
               chr1:34771524-34771359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               74-238
               

               Cow position:
               chr1:95974379-95974543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 142
               

               Conread position:
               74-241
               

               Cow position:
               chr1:28563588-28563425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               7, 70
               

               Conread position:
               74-264
               

               Cow position:
               chr1:67821242-67821051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               78, 8
               

               Conread position:
               74-328
               

               Cow position:
               chr1:99221372-99221139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               24, 57
               

               Conread position:
               74-329
               

               Cow position:
               chr1:97231939-97232175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               24, 134
               

               Conread position:
               74-333
               

               Cow position:
               chr1:8670752-8670995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               24, 142
               

               Conread position:
               74-343
               

               Cow position:
               chr1:45670614-45670859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               75-204
               

               Cow position:
               chr1:74956037-74955911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               75-205
               

               Cow position:
               chr1:64572495-64572626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               75-205
               

               Cow position:
               chr1:98636685-98636812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               23, 115
               

               Conread position:
               75-221
               

               Cow position:
               chr1:42545799-42545652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               75-223
               

               Cow position:
               chr1:102768161-102768306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               75-224
               

               Cow position:
               chr1:74927864-74928014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               75-225
               

               Cow position:
               chr1:63078990-63079138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               75-225
               

               Cow position:
               chr1:77739702-77739852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 115
               

               Conread position:
               75-225
               

               Cow position:
               chr1:97611680-97611526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               75-226
               

               Cow position:
               chr1:20667762-20667611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               24, 123
               

               Conread position:
               75-226
               

               Cow position:
               chr1:49980690-49980841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               23, 75
               

               Conread position:
               75-226
               

               Cow position:
               chr1:78794252-78794099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               75-228
               

               Cow position:
               chr1:76613155-76612999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               75-229
               

               Cow position:
               chr1:24534274-24534121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 65
               

               Conread position:
               75-230
               

               Cow position:
               chr1:97696727-97696881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               23, 65
               

               Conread position:
               75-235
               

               Cow position:
               chr1:68676341-68676503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               75-240
               

               Cow position:
               chr1:81515213-81515378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 120
               

               Conread position:
               75-242
               

               Cow position:
               chr1:186294-186133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               75-261
               

               Cow position:
               chr1:5580041-5580227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               26, 56
               

               Conread position:
               75-280
               

               Cow position:
               chr1:68863015-68863215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               75-307
               

               Cow position:
               chr1:98360416-98360195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 65
               

               Conread position:
               75-324
               

               Cow position:
               chr1:5023782-5023537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 113
               

               Conread position:
               75-333
               

               Cow position:
               chr1:43148568-43148330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 157
               

               Conread position:
               75-335
               

               Cow position:
               chr1:45553260-45553001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               76-199
               

               Cow position:
               chr1:42555247-42555371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               76-204
               

               Cow position:
               chr1:88111856-88111981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               76-218
               

               Cow position:
               chr1:76739928-76739786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               76-220
               

               Cow position:
               chr1:41252426-41252284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               17, 56
               

               Conread position:
               76-224
               

               Cow position:
               chr1:87197801-87197950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               76-225
               

               Cow position:
               chr1:22823886-22824036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               76-226
               

               Cow position:
               chr1:34159816-34159967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               22, 145
               

               Conread position:
               76-226
               

               Cow position:
               chr1:81858921-81858769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               21, 142
               

               Conread position:
               76-226
               

               Cow position:
               chr1:95072313-95072464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               76-227
               

               Cow position:
               chr1:6854323-6854175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               76-245
               

               Cow position:
               chr1:7908018-7908186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               22, 145
               

               Conread position:
               76-248
               

               Cow position:
               chr1:19885365-19885535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               76-333
               

               Cow position:
               chr1:65909494-65909752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 27
               

               Conread position:
               76-352
               

               Cow position:
               chr1:81580159-81580438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 71
               

               Conread position:
               77-204
               

               Cow position:
               chr1:26616094-26615964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               77-206
               

               Cow position:
               chr1:66430275-66430403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               77-211
               

               Cow position:
               chr1:74081999-74081864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               77-214
               

               Cow position:
               chr1:35162392-35162530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               77-221
               

               Cow position:
               chr1:8349336-8349197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               22, 54
               

               Conread position:
               77-224
               

               Cow position:
               chr1:25383651-25383800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               77-224
               

               Cow position:
               chr1:42360268-42360418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 115
               

               Conread position:
               77-226
               

               Cow position:
               chr1:47233496-47233346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               77-228
               

               Cow position:
               chr1:69539673-69539824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 139
               

               Conread position:
               77-260
               

               Cow position:
               chr1:6240298-6240117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               77-318
               

               Cow position:
               chr1:31855264-31855036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               77-326
               

               Cow position:
               chr1:98461268-98461516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               23, 174
               

               Conread position:
               77-330
               

               Cow position:
               chr1:45478877-45478640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               77-331
               

               Cow position:
               chr1:78068087-78067844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               21, 123
               

               Conread position:
               78-213
               

               Cow position:
               chr1:69940840-69940704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               78-217
               

               Cow position:
               chr1:52052734-52052594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               78-224
               

               Cow position:
               chr1:72011830-72011683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               78-225
               

               Cow position:
               chr1:52039621-52039767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 66
               

               Conread position:
               78-226
               

               Cow position:
               chr1:91066168-91066020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               78-240
               

               Cow position:
               chr1:76735495-76735335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 58
               

               Conread position:
               78-247
               

               Cow position:
               chr1:68763701-68763535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               78-270
               

               Cow position:
               chr1:73719444-73719637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 168
               

               Conread position:
               78-328
               

               Cow position:
               chr1:40207138-40206882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 167
               

               Conread position:
               78-330
               

               Cow position:
               chr1:68253576-68253839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               79-212
               

               Cow position:
               chr1:72141561-72141690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               79-219
               

               Cow position:
               chr1:65638899-65639035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               79-223
               

               Cow position:
               chr1:242541-242686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               79-226
               

               Cow position:
               chr1:56711615-56711469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               79-238
               

               Cow position:
               chr1:6381756-6381915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               79-253
               

               Cow position:
               chr1:19978185-19978356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               79-336
               

               Cow position:
               chr1:3417332-3417591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               19, 159
               

               Conread position:
               80-214
               

               Cow position:
               chr1:95516024-95516159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               80-222
               

               Cow position:
               chr1:39418126-39417987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 105
               

               Conread position:
               80-223
               

               Cow position:
               chr1:61011166-61011310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               80-224
               

               Cow position:
               chr1:43311787-43311641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               80-226
               

               Cow position:
               chr1:24570962-24570815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               80-226
               

               Cow position:
               chr1:95156978-95156832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               80-325
               

               Cow position:
               chr1:45874093-45873847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               19, 145
               

               Conread position:
               80-326
               

               Cow position:
               chr1:77683337-77683575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 126
               

               Conread position:
               80-330
               

               Cow position:
               chr1:17317371-17317138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               80-330
               

               Cow position:
               chr1:19304556-19304805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               81-216
               

               Cow position:
               chr1:8601-8737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               81-322
               

               Cow position:
               chr1:53640702-53640946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               160, 60
               

               Conread position:
               81-326
               

               Cow position:
               chr1:59659548-59659297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               82-326
               

               Cow position:
               chr1:98683861-98684091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               11, 67
               

               Conread position:
               83-220
               

               Cow position:
               chr1:20000760-20000622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               14, 105
               

               Conread position:
               84-224
               

               Cow position:
               chr1:22827146-22827285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 125
               

               Conread position:
               84-228
               

               Cow position:
               chr1:64019532-64019387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               87-213
               

               Cow position:
               chr1:83301960-83301831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               88-226
               

               Cow position:
               chr1:759425-759286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               88-226
               

               Cow position:
               chr1:89509928-89509789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               88-226
               

               Cow position:
               chr1:91874919-91874785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               88-230
               

               Cow position:
               chr1:61005569-61005427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 64
               

               Conread position:
               88-267
               

               Cow position:
               chr1:97750626-97750445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               88-326
               

               Cow position:
               chr1:68845176-68844955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 120
               

               Conread position:
               89-223
               

               Cow position:
               chr1:45315642-45315507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               89-225
               

               Cow position:
               chr1:93590592-93590455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               89-225
               

               Cow position:
               chr1:101525931-101525794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               89-237
               

               Cow position:
               chr1:69445323-69445475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               91-225
               

               Cow position:
               chr1:95152868-95153002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               91-226
               

               Cow position:
               chr1:19997975-19997843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               92-216
               

               Cow position:
               chr1:73551512-73551386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               92-219
               

               Cow position:
               chr1:43499298-43499172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               92-225
               

               Cow position:
               chr1:51371814-51371687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               92-330
               

               Cow position:
               chr1:79844463-79844684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               192, 129
               

               Conread position:
               92-330
               

               Cow position:
               chr1:95678035-95678272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               105, 153
               

               Conread position:
               93-228
               

               Cow position:
               chr1:98583751-98583887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               94-224
               

               Cow position:
               chr1:81364260-81364390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-205
               

               Cow position:
               chr1:99605186-99605076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-217
               

               Cow position:
               chr1:23633931-23633807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               30, 102
               

               Conread position:
               95-218
               

               Cow position:
               chr1:92603020-92603143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-226
               

               Cow position:
               chr1:32014199-32014328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               95-226
               

               Cow position:
               chr1:49839486-49839616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               95-226
               

               Cow position:
               chr1:100852710-100852841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               95-226
               

               Cow position:
               chr1:101789088-101788961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               95-227
               

               Cow position:
               chr1:22461237-22461105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               95-315
               

               Cow position:
               chr1:82877186-82877413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               95-320
               

               Cow position:
               chr1:83783929-83783704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               120, 142
               

               Conread position:
               95-328
               

               Cow position:
               chr1:3431359-3431138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 44
               

               Conread position:
               96-219
               

               Cow position:
               chr1:83606448-83606325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-263
               

               Cow position:
               chr1:3882457-3882289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               96-330
               

               Cow position:
               chr1:69185720-69185478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               121, 34
               

               Conread position:
               97-226
               

               Cow position:
               chr1:30948995-30949122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               97-230
               

               Cow position:
               chr1:84594891-84595024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-311
               

               Cow position:
               chr1:36613257-36613058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               98-330
               

               Cow position:
               chr1:18550115-18549883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               120, 5
               

               Conread position:
               99-218
               

               Cow position:
               chr1:31630282-31630163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-224
               

               Cow position:
               chr1:87149810-87149685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-330
               

               Cow position:
               chr1:44269096-44269313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 40
               

               Conread position:
               100-217
               

               Cow position:
               chr1:64706499-64706615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               100-222
               

               Cow position:
               chr1:45283200-45283324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               100-226
               

               Cow position:
               chr1:100812285-100812160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               91, 39
               

               Conread position:
               100-230
               

               Cow position:
               chr1:102730756-102730626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-330
               

               Cow position:
               chr1:55194240-55194025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               101-206
               

               Cow position:
               chr1:22153701-22153805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               101-225
               

               Cow position:
               chr1:19855164-19855283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               101-242
               

               Cow position:
               chr1:9437282-9437142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               101-330
               

               Cow position:
               chr1:23055054-23055265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               102-225
               

               Cow position:
               chr1:70483326-70483203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               102-230
               

               Cow position:
               chr1:69411690-69411561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               103-225
               

               Cow position:
               chr1:39684136-39684015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               5, 75
               

               Conread position:
               103-225
               

               Cow position:
               chr1:46172614-46172735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               103-226
               

               Cow position:
               chr1:43296709-43296587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               103-226
               

               Cow position:
               chr1:98557110-98556987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               103-232
               

               Cow position:
               chr1:89298101-89297973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               103-232
               

               Cow position:
               chr1:89301710-89301582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               103-234
               

               Cow position:
               chr1:68730010-68730141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               14, 10
               

               Conread position:
               103-238
               

               Cow position:
               chr1:73494587-73494452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               103-242
               

               Cow position:
               chr1:98090781-98090652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               103-330
               

               Cow position:
               chr1:46100831-46100594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               117, 203
               

               Conread position:
               103-330
               

               Cow position:
               chr1:49299669-49299892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               9, 126
               

               Conread position:
               103-330
               

               Cow position:
               chr1:92095381-92095588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               104-225
               

               Cow position:
               chr1:25022065-25021944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               104-228
               

               Cow position:
               chr1:63460888-63461011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               104-330
               

               Cow position:
               chr1:76658055-76657843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               213, 9
               

               Conread position:
               104-333
               

               Cow position:
               chr1:81638558-81638787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               119, 150
               

               Conread position:
               105-225
               

               Cow position:
               chr1:45673765-45673885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               105-249
               

               Cow position:
               chr1:78185857-78185712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               106-324
               

               Cow position:
               chr1:42822283-42822492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               136, 110
               

               Conread position:
               106-330
               

               Cow position:
               chr1:6986729-6986520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               107-260
               

               Cow position:
               chr1:49358061-49358210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               108-268
               

               Cow position:
               chr1:63905245-63905083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               100, 122
               

               Conread position:
               108-330
               

               Cow position:
               chr1:75080542-75080334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 68
               

               Conread position:
               109-330
               

               Cow position:
               chr1:98347872-98347667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               203, 65
               

               Conread position:
               110-329
               

               Cow position:
               chr1:96322938-96323174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               111-225
               

               Cow position:
               chr1:55685961-55685845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               111-225
               

               Cow position:
               chr1:84288420-84288535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               111-226
               

               Cow position:
               chr1:70416743-70416627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               111-240
               

               Cow position:
               chr1:64457982-64458111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               111-259
               

               Cow position:
               chr1:99024214-99024066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               112-226
               

               Cow position:
               chr1:32035692-32035578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               113-329
               

               Cow position:
               chr1:77440575-77440795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               111, 80
               

               Conread position:
               116-224
               

               Cow position:
               chr1:42353183-42353290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               94, 25
               

               Conread position:
               116-330
               

               Cow position:
               chr1:32857060-32857267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               117-224
               

               Cow position:
               chr1:98396862-98396755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-249
               

               Cow position:
               chr1:34318763-34318633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               117-326
               

               Cow position:
               chr1:52506149-52505928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               117-330
               

               Cow position:
               chr1:47883593-47883390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               120-333
               

               Cow position:
               chr1:70291813-70292011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               121-225
               

               Cow position:
               chr1:40077821-40077925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-330
               

               Cow position:
               chr1:1875413-1875616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 98
               

               Conread position:
               121-330
               

               Cow position:
               chr1:76080834-76081042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               108, 41
               

               Conread position:
               123-330
               

               Cow position:
               chr1:57331456-57331254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               91, 28
               

               Conread position:
               126-333
               

               Cow position:
               chr1:37886780-37886579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               126-333
               

               Cow position:
               chr1:53671718-53671521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               131-325
               

               Cow position:
               chr1:6962927-6963106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               131-330
               

               Cow position:
               chr1:69269007-69268804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               75, 62
               

               Conread position:
               131-332
               

               Cow position:
               chr1:92999068-92999257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               132-330
               

               Cow position:
               chr1:44678325-44678518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 51
               

               Conread position:
               136-319
               

               Cow position:
               chr1:98402611-98402784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               140-343
               

               Cow position:
               chr1:93228599-93228800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 87
               

               Conread position:
               148-262
               

               Cow position:
               chr1:15167885-15167770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               156-330
               

               Cow position:
               chr1:8359850-8359676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               86, 9
               

               Conread position:
               159-326
               

               Cow position:
               chr1:51654713-51654874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               160-330
               

               Cow position:
               chr1:74266972-74266795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               172-325
               

               Cow position:
               chr1:61030834-61030985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               181-330
               

               Cow position:
               chr1:92384374-92384522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               36, 5
               

               Conread position:
               216-330
               

               Cow position:
               chr1:65883305-65883419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               216-337
               

               Cow position:
               chr1:32019318-32019438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               216-337
               

               Cow position:
               chr1:59698742-59698864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               222-326
               

               Cow position:
               chr1:101779663-101779558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               238-332
               

               Cow position:
               chr1:34767409-34767501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               12, 0
               
Show alignments to all cow chromosomes.
Conread position:	47-228
Cow position:	chr1:62964216-62964401 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	135
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	8, 16
Conread position:	49-230
Cow position:	chr1:3815732-3815549 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	134
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	53, 31
Conread position:	53-333
Cow position:	chr1:89342027-89341747 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	210
Alignm E-value:	4.99983e-42
Alignm gaps (pig, cow):	45, 19
Conread position:	55-226
Cow position:	chr1:75744821-75744996 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	124
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	21, 0
Conread position:	55-273
Cow position:	chr1:27380421-27380635 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	147
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	17, 0
Conread position:	59-218
Cow position:	chr1:97090289-97090450 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	123
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	13, 0
Conread position:	59-225
Cow position:	chr1:89448864-89449032 (view UCSC Genome Browser custom track)
Alignm length:	169
Alignm identity:	125
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	27, 0
Conread position:	59-226
Cow position:	chr1:24133096-24132930 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	125
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	41, 71
Conread position:	59-228
Cow position:	chr1:46764840-46765011 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	135
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	39, 128
Conread position:	60-330
Cow position:	chr1:3790102-3789827 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	193
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	176, 79
Conread position:	63-217
Cow position:	chr1:852136-852293 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	118
Alignm E-value:	8e-25
Alignm gaps (pig, cow):	9, 0
Conread position:	63-218
Cow position:	chr1:92996921-92996767 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	115
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	35, 7
Conread position:	64-217
Cow position:	chr1:47402497-47402651 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	123
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	34, 113
Conread position:	64-230
Cow position:	chr1:16061034-16060869 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	120
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	34, 12
Conread position:	64-316
Cow position:	chr1:79087891-79087646 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	179
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	33, 12
Conread position:	64-330
Cow position:	chr1:64328889-64329137 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	205
Alignm E-value:	1e-39
Alignm gaps (pig, cow):	18, 69
Conread position:	65-209
Cow position:	chr1:37309551-37309404 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	117
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	12, 0
Conread position:	65-215
Cow position:	chr1:5751284-5751434 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	112
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	32, 15
Conread position:	65-222
Cow position:	chr1:65028503-65028659 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	120
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	7, 144
Conread position:	65-223
Cow position:	chr1:43505501-43505658 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	116
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	33, 15