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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_010852.5
        

               
Conread position:
               
8-230
               

               
Cow position:
               
chr11:70483964-70483738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
20-226
               

               
Cow position:
               
chr11:82289481-82289687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
26-326
               

               
Cow position:
               
chr11:4653064-4652768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
48-228
               

               
Cow position:
               
chr11:11533994-11533821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
50-226
               

               
Cow position:
               
chr11:58927513-58927688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
57-228
               

               
Cow position:
               
chr11:62663293-62663124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
58-232
               

               
Cow position:
               
chr11:29946972-29946798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
58-330
               

               
Cow position:
               
chr11:59702427-59702698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
107, 161
               

               
Conread position:
               
59-226
               

               
Cow position:
               
chr11:17721861-17721692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
59-330
               

               
Cow position:
               
chr11:22747387-22747125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
59-330
               

               
Cow position:
               
chr11:69119233-69119503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 161
               

               
Conread position:
               
64-203
               

               
Cow position:
               
chr11:63687675-63687534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
64-217
               

               
Cow position:
               
chr11:30925102-30925254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
64-218
               

               
Cow position:
               
chr11:3714772-3714921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
64-223
               

               
Cow position:
               
chr11:42296674-42296514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
64-224
               

               
Cow position:
               
chr11:46747914-46747754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
64-225
               

               
Cow position:
               
chr11:19592048-19591887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
65-212
               

               
Cow position:
               
chr11:76606619-76606767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
65-226
               

               
Cow position:
               
chr11:17889784-17889618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
65-226
               

               
Cow position:
               
chr11:33348240-33348079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
9, 132
               

               
Conread position:
               
65-226
               

               
Cow position:
               
chr11:42160108-42159949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
65-226
               

               
Cow position:
               
chr11:66041231-66041387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
65-237
               

               
Cow position:
               
chr11:50152867-50152693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
65-242
               

               
Cow position:
               
chr11:63920107-63919929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
65-249
               

               
Cow position:
               
chr11:70278165-70277982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
65-317
               

               
Cow position:
               
chr11:47772443-47772212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
34, 143
               

               
Conread position:
               
65-326
               

               
Cow position:
               
chr11:6202389-6202635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 160
               

               
Conread position:
               
65-328
               

               
Cow position:
               
chr11:3282977-3283222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
65-330
               

               
Cow position:
               
chr11:83579227-83578963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
67-225
               

               
Cow position:
               
chr11:61137226-61137067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
68-218
               

               
Cow position:
               
chr11:17278722-17278575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
68-223
               

               
Cow position:
               
chr11:63202300-63202143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
68-225
               

               
Cow position:
               
chr11:37804605-37804446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
68-226
               

               
Cow position:
               
chr11:31885667-31885831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
68-226
               

               
Cow position:
               
chr11:32436282-32436441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 104
               

               
Conread position:
               
69-216
               

               
Cow position:
               
chr11:70086285-70086431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
69-224
               

               
Cow position:
               
chr11:71110842-71110998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
69-226
               

               
Cow position:
               
chr11:36920627-36920467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
69-330
               

               
Cow position:
               
chr11:17321598-17321850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
70-203
               

               
Cow position:
               
chr11:58400204-58400334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
70-205
               

               
Cow position:
               
chr11:48306396-48306259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
70-205
               

               
Cow position:
               
chr11:48512116-48512251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
70-213
               

               
Cow position:
               
chr11:7307583-7307729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
70-213
               

               
Cow position:
               
chr11:86720466-86720322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
70-219
               

               
Cow position:
               
chr11:41603734-41603585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
70-222
               

               
Cow position:
               
chr11:71492908-71492757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
70-225
               

               
Cow position:
               
chr11:27913236-27913392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
70-225
               

               
Cow position:
               
chr11:48659885-48660042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
70-225
               

               
Cow position:
               
chr11:67804702-67804850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
70-226
               

               
Cow position:
               
chr11:54334280-54334437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
70-226
               

               
Cow position:
               
chr11:76114598-76114751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 102
               

               
Conread position:
               
70-230
               

               
Cow position:
               
chr11:25791743-25791582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
6, 41
               

               
Conread position:
               
70-231
               

               
Cow position:
               
chr11:16540814-16540974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
70-293
               

               
Cow position:
               
chr11:63917524-63917315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
70-321
               

               
Cow position:
               
chr11:6633663-6633900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
70-326
               

               
Cow position:
               
chr11:84775027-84775270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr11:4430180-4429941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr11:23138101-23137843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr11:36848877-36849140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
145, 31
               

               
Conread position:
               
70-333
               

               
Cow position:
               
chr11:7013789-7013542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
71-194
               

               
Cow position:
               
chr11:71482332-71482456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
71-199
               

               
Cow position:
               
chr11:52983628-52983757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
71-209
               

               
Cow position:
               
chr11:36986905-36987041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
71-215
               

               
Cow position:
               
chr11:19247246-19247102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
71-215
               

               
Cow position:
               
chr11:68913093-68913239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
71-216
               

               
Cow position:
               
chr11:19586411-19586558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
71-217
               

               
Cow position:
               
chr11:30934374-30934516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
71-219
               

               
Cow position:
               
chr11:19946388-19946531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
71-219
               

               
Cow position:
               
chr11:73512487-73512342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
71-221
               

               
Cow position:
               
chr11:4199224-4199374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
71-221
               

               
Cow position:
               
chr11:23128587-23128436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
71-224
               

               
Cow position:
               
chr11:21844179-21844032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
71-224
               

               
Cow position:
               
chr11:44636802-44636648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 138
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr11:7590145-7590296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr11:7924636-7924486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr11:13499970-13500124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr11:31227915-31228070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr11:31875045-31875200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr11:41313704-41313547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr11:51729239-51729394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr11:65607739-65607581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr11:71868650-71868495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr11:71935002-71934849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
71-226
               

               
Cow position:
               
chr11:18587643-18587489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
71-226
               

               
Cow position:
               
chr11:40608641-40608486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
71-226
               

               
Cow position:
               
chr11:46746584-46746747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
71-226
               

               
Cow position:
               
chr11:47004301-47004454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
71-226
               

               
Cow position:
               
chr11:62742689-62742537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
71-226
               

               
Cow position:
               
chr11:67600737-67600893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
71-226
               

               
Cow position:
               
chr11:71501179-71501025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
27, 133
               

               
Conread position:
               
71-227
               

               
Cow position:
               
chr11:62620326-62620486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
71-228
               

               
Cow position:
               
chr11:372752-372600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
71-234
               

               
Cow position:
               
chr11:48474656-48474820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
71-239
               

               
Cow position:
               
chr11:35573537-35573370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 57
               

               
Conread position:
               
71-241
               

               
Cow position:
               
chr11:30954953-30955124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
71-250
               

               
Cow position:
               
chr11:18698830-18699012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 157
               

               
Conread position:
               
71-253
               

               
Cow position:
               
chr11:25387019-25387211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
71-319
               

               
Cow position:
               
chr11:73924610-73924360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
71-325
               

               
Cow position:
               
chr11:62754366-62754120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
28, 143
               

               
Conread position:
               
71-326
               

               
Cow position:
               
chr11:79019106-79018831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
71-330
               

               
Cow position:
               
chr11:48649925-48650169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
25, 157
               

               
Conread position:
               
71-332
               

               
Cow position:
               
chr11:48272153-48272430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
71-346
               

               
Cow position:
               
chr11:69307466-69307729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 160
               

               
Conread position:
               
72-182
               

               
Cow position:
               
chr11:61858949-61858838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
72-203
               

               
Cow position:
               
chr11:34106716-34106584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
72-204
               

               
Cow position:
               
chr11:53553173-53553302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
72-206
               

               
Cow position:
               
chr11:49934777-49934642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
72-209
               

               
Cow position:
               
chr11:33527005-33527144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
72-210
               

               
Cow position:
               
chr11:64638571-64638433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
72-211
               

               
Cow position:
               
chr11:33409308-33409168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
72-212
               

               
Cow position:
               
chr11:70978780-70978641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
72-213
               

               
Cow position:
               
chr11:16320240-16320379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
72-213
               

               
Cow position:
               
chr11:22499410-22499271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
72-213
               

               
Cow position:
               
chr11:29659513-29659655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
72-213
               

               
Cow position:
               
chr11:65767153-65767295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
72-216
               

               
Cow position:
               
chr11:2084097-2084242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-216
               

               
Cow position:
               
chr11:58588300-58588443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
72-217
               

               
Cow position:
               
chr11:53510546-53510403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
72-217
               

               
Cow position:
               
chr11:81762816-81762967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
72-218
               

               
Cow position:
               
chr11:1362514-1362367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
72-218
               

               
Cow position:
               
chr11:70206275-70206418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
72-219
               

               
Cow position:
               
chr11:3234029-3234177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-219
               

               
Cow position:
               
chr11:30638996-30638848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-219
               

               
Cow position:
               
chr11:41809539-41809391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
72-222
               

               
Cow position:
               
chr11:22977920-22977770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
24, 123
               

               
Conread position:
               
72-222
               

               
Cow position:
               
chr11:67912199-67912047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
72-223
               

               
Cow position:
               
chr11:23407418-23407570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-223
               

               
Cow position:
               
chr11:70756436-70756584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
72-223
               

               
Cow position:
               
chr11:84890763-84890612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
72-224
               

               
Cow position:
               
chr11:27565287-27565437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
72-224
               

               
Cow position:
               
chr11:62789084-62789236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 147
               

               
Conread position:
               
72-224
               

               
Cow position:
               
chr11:64104953-64105104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
72-224
               

               
Cow position:
               
chr11:77319368-77319521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:3393255-3393102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:4207265-4207418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:4663093-4662940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:13592689-13592843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:30830660-30830506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:35109584-35109431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:35669998-35669845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:35926951-35926802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:39462577-39462731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:52690566-52690414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:55744421-55744575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:71807615-71807459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:78381107-78380957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
72-225
               

               
Cow position:
               
chr11:84385683-84385531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
72-226
               

               
Cow position:
               
chr11:6233926-6233771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-226
               

               
Cow position:
               
chr11:34646543-34646698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-226
               

               
Cow position:
               
chr11:36182644-36182803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
72-226
               

               
Cow position:
               
chr11:62812996-62812841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
72-226
               

               
Cow position:
               
chr11:63484900-63485046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
72-226
               

               
Cow position:
               
chr11:83926003-83926151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
72-228
               

               
Cow position:
               
chr11:1071137-1070980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-228
               

               
Cow position:
               
chr11:33345399-33345556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
72-228
               

               
Cow position:
               
chr11:84977405-84977248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 145
               

               
Conread position:
               
72-231
               

               
Cow position:
               
chr11:11125617-11125776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 132
               

               
Conread position:
               
72-232
               

               
Cow position:
               
chr11:29960252-29960410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
72-235
               

               
Cow position:
               
chr11:49152904-49153067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
72-240
               

               
Cow position:
               
chr11:66572543-66572375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
72-242
               

               
Cow position:
               
chr11:15382549-15382378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
72-242
               

               
Cow position:
               
chr11:34144960-34144800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
72-242
               

               
Cow position:
               
chr11:34963021-34963196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
72-242
               

               
Cow position:
               
chr11:72375729-72375551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
72-242
               

               
Cow position:
               
chr11:84498996-84498830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
72-243
               

               
Cow position:
               
chr11:33697595-33697762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
72-262
               

               
Cow position:
               
chr11:66518445-66518630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
72-266
               

               
Cow position:
               
chr11:70825902-70826097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
72-277
               

               
Cow position:
               
chr11:83033282-83033080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
72-306
               

               
Cow position:
               
chr11:62150937-62150697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
72-318
               

               
Cow position:
               
chr11:19606531-19606765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
26, 146
               

               
Conread position:
               
72-319
               

               
Cow position:
               
chr11:61958790-61958522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr11:48248262-48248023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr11:50072891-50073132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
72-326
               

               
Cow position:
               
chr11:33341191-33340940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 191
               

               
Conread position:
               
72-326
               

               
Cow position:
               
chr11:82731044-82730805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
72-329
               

               
Cow position:
               
chr11:41452044-41451796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr11:14466533-14466273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr11:16907095-16906848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr11:27932229-27932485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
26, 144
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr11:61454559-61454320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr11:62609562-62609822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 14
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr11:83230446-83230187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
72-333
               

               
Cow position:
               
chr11:69075865-69076119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
72-337
               

               
Cow position:
               
chr11:30888329-30888068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
72-354
               

               
Cow position:
               
chr11:10363431-10363139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
134, 118
               

               
Conread position:
               
73-186
               

               
Cow position:
               
chr11:70273261-70273375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
73-199
               

               
Cow position:
               
chr11:13040217-13040090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
73-204
               

               
Cow position:
               
chr11:31352597-31352465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
73-204
               

               
Cow position:
               
chr11:38639066-38639198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
73-210
               

               
Cow position:
               
chr11:39118710-39118850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
73-219
               

               
Cow position:
               
chr11:45631805-45631664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
73-221
               

               
Cow position:
               
chr11:8147943-8147796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
73-223
               

               
Cow position:
               
chr11:20602179-20602334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
6, 95
               

               
Conread position:
               
73-223
               

               
Cow position:
               
chr11:42083427-42083573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
73-224
               

               
Cow position:
               
chr11:18447537-18447384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
73-224
               

               
Cow position:
               
chr11:30210864-30211011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
73-224
               

               
Cow position:
               
chr11:77013739-77013887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
73-225
               

               
Cow position:
               
chr11:8684128-8683972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
73-225
               

               
Cow position:
               
chr11:38211600-38211753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
73-225
               

               
Cow position:
               
chr11:63435476-63435628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
73-226
               

               
Cow position:
               
chr11:17493433-17493591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 122
               

               
Conread position:
               
73-226
               

               
Cow position:
               
chr11:20205897-20205743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
73-226
               

               
Cow position:
               
chr11:34113220-34113375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
73-226
               

               
Cow position:
               
chr11:48295988-48296139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
73-226
               

               
Cow position:
               
chr11:52297264-52297111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 13
               

               
Conread position:
               
73-230
               

               
Cow position:
               
chr11:375414-375572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
73-230
               

               
Cow position:
               
chr11:26144140-26143983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
73-241
               

               
Cow position:
               
chr11:40573377-40573212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
73-242
               

               
Cow position:
               
chr11:17990282-17990120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
73-242
               

               
Cow position:
               
chr11:32398593-32398758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
73-255
               

               
Cow position:
               
chr11:36238735-36238914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
73-263
               

               
Cow position:
               
chr11:36658864-36658676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
73-277
               

               
Cow position:
               
chr11:63847801-63848000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 130
               

               
Conread position:
               
73-285
               

               
Cow position:
               
chr11:87155475-87155686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
73-326
               

               
Cow position:
               
chr11:41293863-41293625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr11:33310928-33311192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr11:34692808-34693060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 179
               

               
Conread position:
               
73-331
               

               
Cow position:
               
chr11:64351836-64351580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
23, 146
               

               
Conread position:
               
73-335
               

               
Cow position:
               
chr11:43430499-43430247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
73-345
               

               
Cow position:
               
chr11:1932537-1932290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
74-201
               

               
Cow position:
               
chr11:56654511-56654639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
74-201
               

               
Cow position:
               
chr11:75874799-75874671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
74-204
               

               
Cow position:
               
chr11:7414916-7414789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
74-204
               

               
Cow position:
               
chr11:69652825-69652695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
74-210
               

               
Cow position:
               
chr11:61130709-61130574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
74-211
               

               
Cow position:
               
chr11:36112379-36112513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
74-213
               

               
Cow position:
               
chr11:49148995-49149145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
74-216
               

               
Cow position:
               
chr11:40792751-40792606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
74-217
               

               
Cow position:
               
chr11:36799351-36799208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 116
               

               
Conread position:
               
74-217
               

               
Cow position:
               
chr11:62889938-62889794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
74-219
               

               
Cow position:
               
chr11:8988274-8988130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
74-223
               

               
Cow position:
               
chr11:40459063-40459214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
74-226
               

               
Cow position:
               
chr11:13043190-13043037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
74-227
               

               
Cow position:
               
chr11:31506805-31506960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
74-228
               

               
Cow position:
               
chr11:17083354-17083200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
29, 137
               

               
Conread position:
               
74-229
               

               
Cow position:
               
chr11:897629-897786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
74-230
               

               
Cow position:
               
chr11:48063845-48063688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
74-234
               

               
Cow position:
               
chr11:50472273-50472433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
74-240
               

               
Cow position:
               
chr11:29786544-29786376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 150
               

               
Conread position:
               
74-240
               

               
Cow position:
               
chr11:80413059-80412892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 143
               

               
Conread position:
               
74-242
               

               
Cow position:
               
chr11:46952903-46953070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 147
               

               
Conread position:
               
74-242
               

               
Cow position:
               
chr11:47837276-47837444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
74-243
               

               
Cow position:
               
chr11:42044036-42043871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
74-261
               

               
Cow position:
               
chr11:77128616-77128802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 163
               

               
Conread position:
               
74-263
               

               
Cow position:
               
chr11:71341509-71341319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
74-264
               

               
Cow position:
               
chr11:28644043-28644232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
24, 163
               

               
Conread position:
               
74-270
               

               
Cow position:
               
chr11:56290467-56290660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
24, 163
               

               
Conread position:
               
74-280
               

               
Cow position:
               
chr11:56518350-56518152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
197, 29
               

               
Conread position:
               
75-206
               

               
Cow position:
               
chr11:63434101-63433971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
75-217
               

               
Cow position:
               
chr11:20761804-20761942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
75-219
               

               
Cow position:
               
chr11:23232559-23232418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
75-223
               

               
Cow position:
               
chr11:43914250-43914399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
75-224
               

               
Cow position:
               
chr11:78820111-78820256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
75-225
               

               
Cow position:
               
chr11:28078460-28078601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
75-225
               

               
Cow position:
               
chr11:55761825-55761973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 123
               

               
Conread position:
               
75-226
               

               
Cow position:
               
chr11:38236208-38236360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
75-226
               

               
Cow position:
               
chr11:65826794-65826642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
75-227
               

               
Cow position:
               
chr11:81931155-81931007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
75-228
               

               
Cow position:
               
chr11:35536544-35536697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
75-234
               

               
Cow position:
               
chr11:53778573-53778735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
75-248
               

               
Cow position:
               
chr11:21852345-21852174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 140
               

               
Conread position:
               
75-267
               

               
Cow position:
               
chr11:80616200-80616384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
75-326
               

               
Cow position:
               
chr11:377685-377441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 141
               

               
Conread position:
               
75-331
               

               
Cow position:
               
chr11:26845637-26845385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
25, 129
               

               
Conread position:
               
76-205
               

               
Cow position:
               
chr11:21438166-21438296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
76-215
               

               
Cow position:
               
chr11:41549375-41549234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
76-217
               

               
Cow position:
               
chr11:42359072-42359219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
76-218
               

               
Cow position:
               
chr11:73354102-73353960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 140
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr11:15373796-15373944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 115
               

               
Conread position:
               
76-225
               

               
Cow position:
               
chr11:34136201-34136348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
76-225
               

               
Cow position:
               
chr11:34467529-34467674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
76-226
               

               
Cow position:
               
chr11:39060644-39060494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
76-226
               

               
Cow position:
               
chr11:41986088-41985937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
76-239
               

               
Cow position:
               
chr11:33753947-33753788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
76-249
               

               
Cow position:
               
chr11:71345366-71345193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
77-217
               

               
Cow position:
               
chr11:82940659-82940525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
77-222
               

               
Cow position:
               
chr11:9270766-9270622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
77-225
               

               
Cow position:
               
chr11:18509073-18508923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
77-226
               

               
Cow position:
               
chr11:60470233-60470090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
77-226
               

               
Cow position:
               
chr11:63482467-63482322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
77-226
               

               
Cow position:
               
chr11:66188358-66188208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
77-228
               

               
Cow position:
               
chr11:17227683-17227534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
77-228
               

               
Cow position:
               
chr11:55052829-55052982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
77-228
               

               
Cow position:
               
chr11:62155597-62155749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
77-273
               

               
Cow position:
               
chr11:63909705-63909508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
77-329
               

               
Cow position:
               
chr11:64868062-64867810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
77-330
               

               
Cow position:
               
chr11:17831262-17831023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
78-205
               

               
Cow position:
               
chr11:249522-249394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
78-226
               

               
Cow position:
               
chr11:23586598-23586747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
79-225
               

               
Cow position:
               
chr11:46427447-46427298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
79-226
               

               
Cow position:
               
chr11:30272970-30272831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
79-259
               

               
Cow position:
               
chr11:40478892-40478714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
20, 152
               

               
Conread position:
               
80-204
               

               
Cow position:
               
chr11:18608276-18608151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
80-298
               

               
Cow position:
               
chr11:62778406-62778616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
81-331
               

               
Cow position:
               
chr11:53717844-53717607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
82-330
               

               
Cow position:
               
chr11:58938781-58938533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 153
               

               
Conread position:
               
82-331
               

               
Cow position:
               
chr11:58173589-58173817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
16, 65
               

               
Conread position:
               
83-237
               

               
Cow position:
               
chr11:72292518-72292670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 5
               

               
Conread position:
               
84-216
               

               
Cow position:
               
chr11:30895037-30894905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
84-330
               

               
Cow position:
               
chr11:19788091-19788337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
85-264
               

               
Cow position:
               
chr11:5789933-5789753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
86-248
               

               
Cow position:
               
chr11:32691003-32690840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
87-225
               

               
Cow position:
               
chr11:62168362-62168224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
87-226
               

               
Cow position:
               
chr11:63382222-63382082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
87-226
               

               
Cow position:
               
chr11:67312749-67312889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
88-201
               

               
Cow position:
               
chr11:64090127-64090013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
88-225
               

               
Cow position:
               
chr11:67615275-67615139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
88-235
               

               
Cow position:
               
chr11:35213198-35213050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
88-312
               

               
Cow position:
               
chr11:65803901-65803681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
89-217
               

               
Cow position:
               
chr11:30355029-30355158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
89-232
               

               
Cow position:
               
chr11:64058372-64058230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
90-204
               

               
Cow position:
               
chr11:2900749-2900634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
90-205
               

               
Cow position:
               
chr11:28993765-28993652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
90-223
               

               
Cow position:
               
chr11:15683007-15682874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
90-265
               

               
Cow position:
               
chr11:9698874-9699046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
91-334
               

               
Cow position:
               
chr11:952243-952473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
92-212
               

               
Cow position:
               
chr11:32782910-32782789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
93-330
               

               
Cow position:
               
chr11:73984028-73983807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
94-230
               

               
Cow position:
               
chr11:56114915-56115053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
95-219
               

               
Cow position:
               
chr11:5201674-5201551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
95-225
               

               
Cow position:
               
chr11:63165669-63165539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
95-242
               

               
Cow position:
               
chr11:47784752-47784897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
95-316
               

               
Cow position:
               
chr11:35363459-35363666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
196, 110
               

               
Conread position:
               
95-330
               

               
Cow position:
               
chr11:47882781-47883006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
96-224
               

               
Cow position:
               
chr11:80586252-80586381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
97-225
               

               
Cow position:
               
chr11:17517378-17517506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
97-242
               

               
Cow position:
               
chr11:79466191-79466339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
98-215
               

               
Cow position:
               
chr11:42056087-42056204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
98-230
               

               
Cow position:
               
chr11:85186547-85186414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
99-230
               

               
Cow position:
               
chr11:66099881-66099750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
99-262
               

               
Cow position:
               
chr11:30805149-30804991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
100-219
               

               
Cow position:
               
chr11:29482453-29482334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
100-242
               

               
Cow position:
               
chr11:68918291-68918428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
100-343
               

               
Cow position:
               
chr11:74378857-74379087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
101-224
               

               
Cow position:
               
chr11:9699261-9699138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
101-227
               

               
Cow position:
               
chr11:81728665-81728539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
101-339
               

               
Cow position:
               
chr11:70517610-70517386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
102-226
               

               
Cow position:
               
chr11:44031996-44032120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
102-230
               

               
Cow position:
               
chr11:71767586-71767714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
102-242
               

               
Cow position:
               
chr11:74720709-74720848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
102-329
               

               
Cow position:
               
chr11:47164934-47164705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 101
               

               
Conread position:
               
102-330
               

               
Cow position:
               
chr11:81605843-81606061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
103-225
               

               
Cow position:
               
chr11:47586073-47585955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
103-225
               

               
Cow position:
               
chr11:62808520-62808399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
103-226
               

               
Cow position:
               
chr11:41983181-41983057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
103-226
               

               
Cow position:
               
chr11:79707699-79707818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
103-260
               

               
Cow position:
               
chr11:65843088-65842935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
103-318
               

               
Cow position:
               
chr11:6092368-6092572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
14, 10
               

               
Conread position:
               
103-330
               

               
Cow position:
               
chr11:37982592-37982365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-225
               

               
Cow position:
               
chr11:49396539-49396418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
105-333
               

               
Cow position:
               
chr11:70709771-70709998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
54, 135
               

               
Conread position:
               
108-242
               

               
Cow position:
               
chr11:16796215-16796346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 5
               

               
Conread position:
               
109-228
               

               
Cow position:
               
chr11:37923263-37923381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
110-246
               

               
Cow position:
               
chr11:25320178-25320317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
111-330
               

               
Cow position:
               
chr11:59916140-59916353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
111-331
               

               
Cow position:
               
chr11:11523464-11523257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
112-224
               

               
Cow position:
               
chr11:22468679-22468790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
114-337
               

               
Cow position:
               
chr11:35073597-35073377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
115-225
               

               
Cow position:
               
chr11:30192176-30192287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
115-326
               

               
Cow position:
               
chr11:56895977-56895753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr11:4436747-4436938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
117-333
               

               
Cow position:
               
chr11:31326006-31326205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
119-326
               

               
Cow position:
               
chr11:70513589-70513794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
121-242
               

               
Cow position:
               
chr11:35860586-35860705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
121-330
               

               
Cow position:
               
chr11:61178361-61178573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
109, 139
               

               
Conread position:
               
122-274
               

               
Cow position:
               
chr11:79991274-79991123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
139, 122
               

               
Conread position:
               
123-249
               

               
Cow position:
               
chr11:63199538-63199664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-304
               

               
Cow position:
               
chr11:42067059-42067228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
125-326
               

               
Cow position:
               
chr11:62225994-62226188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
125-333
               

               
Cow position:
               
chr11:64951834-64952041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
126-230
               

               
Cow position:
               
chr11:2284652-2284756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
126-333
               

               
Cow position:
               
chr11:13843456-13843659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
127-331
               

               
Cow position:
               
chr11:71443230-71443038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
120, 52
               

               
Conread position:
               
132-260
               

               
Cow position:
               
chr11:5200564-5200438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
132-330
               

               
Cow position:
               
chr11:75246363-75246553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
133-331
               

               
Cow position:
               
chr11:36251194-36250998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
134-317
               

               
Cow position:
               
chr11:45437295-45437478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
117, 172
               

               
Conread position:
               
135-330
               

               
Cow position:
               
chr11:34623188-34623397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
136-328
               

               
Cow position:
               
chr11:17574331-17574150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
140-322
               

               
Cow position:
               
chr11:6024562-6024387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
146-326
               

               
Cow position:
               
chr11:80600946-80601132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
151-322
               

               
Cow position:
               
chr11:2864037-2864198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
151-330
               

               
Cow position:
               
chr11:21817028-21816851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
156-330
               

               
Cow position:
               
chr11:55243559-55243380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 141
               

               
Conread position:
               
159-326
               

               
Cow position:
               
chr11:63549868-63550034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
97, 144
               

               
Conread position:
               
216-333
               

               
Cow position:
               
chr11:5607548-5607665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
237-330
               

               
Cow position:
               
chr11:48932499-48932406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-347
               

               
Cow position:
               
chr11:56901957-56901863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               
Show alignments to all cow chromosomes.