Cow genome map

Conread name: Ss1.1-rpigcf0_010852.5

Conread position: 32-330
Cow position: chr18:15025571-15025869 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 46

Conread position: 40-249
Cow position: chr18:38757933-38757719 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 44-225
Cow position: chr18:47920653-47920838 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 19

Conread position: 51-201
Cow position: chr18:18649772-18649626 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 22

Conread position: 56-206
Cow position: chr18:25281969-25281818 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 16

Conread position: 56-216
Cow position: chr18:50974372-50974210 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 58-235
Cow position: chr18:16686409-16686231 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 14

Conread position: 59-217
Cow position: chr18:12242202-12242359 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 81

Conread position: 59-224
Cow position: chr18:48713476-48713642 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 64-219
Cow position: chr18:56181531-56181370 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 115

Conread position: 64-224
Cow position: chr18:14586539-14586379 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 12

Conread position: 64-239
Cow position: chr18:47548057-47547881 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 12, 123

Conread position: 64-326
Cow position: chr18:3158666-3158421 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 89, 156

Conread position: 65-187
Cow position: chr18:31125294-31125174 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 66

Conread position: 65-199
Cow position: chr18:23476756-23476621 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 65-216
Cow position: chr18:3211809-3211961 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 65-216
Cow position: chr18:24266475-24266324 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 5

Conread position: 65-225
Cow position: chr18:25282621-25282463 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 33, 7

Conread position: 65-226
Cow position: chr18:24719244-24719406 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 65-226
Cow position: chr18:56191031-56190869 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 10, 68

Conread position: 66-204
Cow position: chr18:52406630-52406763 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 74

Conread position: 67-248
Cow position: chr18:26458415-26458235 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 10

Conread position: 68-225
Cow position: chr18:48961868-48962028 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 68-330
Cow position: chr18:43555590-43555347 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 147

Conread position: 69-218
Cow position: chr18:21192476-21192329 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 69-226
Cow position: chr18:33158877-33159035 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 44

Conread position: 69-333
Cow position: chr18:28768301-28768560 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 100

Conread position: 70-201
Cow position: chr18:56165918-56166049 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 113
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 58

Conread position: 70-205
Cow position: chr18:25006557-25006421 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 70-225
Cow position: chr18:4556230-4556078 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 70

Conread position: 70-225
Cow position: chr18:42427557-42427712 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 12

Conread position: 70-226
Cow position: chr18:21768557-21768706 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 70-230
Cow position: chr18:3180347-3180508 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 70-299
Cow position: chr18:39022192-39022419 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 28, 113

Conread position: 70-326
Cow position: chr18:21708191-21707941 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 151

Conread position: 71-213
Cow position: chr18:39623737-39623880 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 71-217
Cow position: chr18:2549366-2549219 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 71

Conread position: 71-218
Cow position: chr18:45558084-45558233 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 71-219
Cow position: chr18:5711713-5711567 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 71-224
Cow position: chr18:51383458-51383306 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 71-225
Cow position: chr18:5632205-5632360 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 71-226
Cow position: chr18:14225328-14225487 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 71-226
Cow position: chr18:29474681-29474836 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 98

Conread position: 71-226
Cow position: chr18:44262568-44262723 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 18

Conread position: 71-226
Cow position: chr18:48242127-48242285 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 46, 32

Conread position: 71-228
Cow position: chr18:40047561-40047406 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 88

Conread position: 71-234
Cow position: chr18:20175257-20175094 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 101

Conread position: 71-250
Cow position: chr18:52245130-52245326 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 71-260
Cow position: chr18:39434764-39434950 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 47

Conread position: 71-325
Cow position: chr18:35012380-35012115 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 71-326
Cow position: chr18:36458871-36459114 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 27, 49

Conread position: 71-329
Cow position: chr18:22055937-22055695 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 141

Conread position: 71-331
Cow position: chr18:9176840-9177093 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 27, 48

Conread position: 71-331
Cow position: chr18:18699078-18699331 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 101

Conread position: 72-202
Cow position: chr18:1607192-1607318 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 97

Conread position: 72-203
Cow position: chr18:11691470-11691339 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 80

Conread position: 72-204
Cow position: chr18:33299843-33299975 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 16

Conread position: 72-205
Cow position: chr18:11684920-11685054 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 72-205
Cow position: chr18:44801951-44801817 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 72-212
Cow position: chr18:53642810-53642671 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 81

Conread position: 72-213
Cow position: chr18:16659494-16659352 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 72-216
Cow position: chr18:56172072-56171931 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 59

Conread position: 72-217
Cow position: chr18:9008068-9008209 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 37

Conread position: 72-218
Cow position: chr18:47693004-47693150 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 144

Conread position: 72-219
Cow position: chr18:45104503-45104352 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 125

Conread position: 72-221
Cow position: chr18:31711626-31711474 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 131

Conread position: 72-222
Cow position: chr18:30586283-30586136 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 59

Conread position: 72-224
Cow position: chr18:11322534-11322687 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 72-224
Cow position: chr18:33157756-33157906 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 65

Conread position: 72-225
Cow position: chr18:4624209-4624058 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 36

Conread position: 72-225
Cow position: chr18:11867275-11867431 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 142

Conread position: 72-225
Cow position: chr18:12273596-12273750 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 72-225
Cow position: chr18:17005198-17005353 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 72-225
Cow position: chr18:24508298-24508139 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 72-225
Cow position: chr18:24759718-24759564 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 72-225
Cow position: chr18:35874018-35874170 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 38

Conread position: 72-225
Cow position: chr18:43283819-43283665 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 114

Conread position: 72-226
Cow position: chr18:912165-912013 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 59

Conread position: 72-226
Cow position: chr18:17391055-17390901 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 78

Conread position: 72-226
Cow position: chr18:18592411-18592566 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 72-226
Cow position: chr18:19787917-19788073 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 72-226
Cow position: chr18:47705173-47705328 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 72-226
Cow position: chr18:50359269-50359425 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 129
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 72-227
Cow position: chr18:22569128-22568973 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 139

Conread position: 72-228
Cow position: chr18:1571297-1571142 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 59

Conread position: 72-230
Cow position: chr18:51594866-51594706 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 72-230
Cow position: chr18:56183565-56183412 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 43

Conread position: 72-239
Cow position: chr18:247751-247590 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 60

Conread position: 72-240
Cow position: chr18:11754071-11754233 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 72-240
Cow position: chr18:37002570-37002739 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 72-240
Cow position: chr18:52413903-52414074 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 72-242
Cow position: chr18:4872010-4872172 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 26, 59

Conread position: 72-249
Cow position: chr18:51392701-51392527 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 26, 37

Conread position: 72-270
Cow position: chr18:4758094-4757903 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 66

Conread position: 72-271
Cow position: chr18:49324496-49324298 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 70

Conread position: 72-326
Cow position: chr18:24342780-24343025 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 9, 145

Conread position: 72-326
Cow position: chr18:35889157-35888926 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 72-327
Cow position: chr18:6399694-6399459 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 26, 59

Conread position: 72-329
Cow position: chr18:25647310-25647053 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 68

Conread position: 72-329
Cow position: chr18:33008001-33008249 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 159

Conread position: 72-330
Cow position: chr18:21266444-21266711 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 24, 250

Conread position: 72-330
Cow position: chr18:35692794-35693041 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 125

Conread position: 72-330
Cow position: chr18:41950147-41950379 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 17

Conread position: 72-333
Cow position: chr18:46072401-46072641 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 26, 166

Conread position: 73-200
Cow position: chr18:4182248-4182121 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 107

Conread position: 73-216
Cow position: chr18:22120946-22120802 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 73-218
Cow position: chr18:56301832-56301976 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 69

Conread position: 73-219
Cow position: chr18:48828835-48828689 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 70

Conread position: 73-223
Cow position: chr18:5078834-5078684 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 26, 122

Conread position: 73-223
Cow position: chr18:31672572-31672423 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 73-223
Cow position: chr18:35367253-35367107 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 58

Conread position: 73-223
Cow position: chr18:55499012-55499161 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 14

Conread position: 73-225
Cow position: chr18:49038401-49038554 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 16

Conread position: 73-225
Cow position: chr18:51643426-51643274 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 25, 121

Conread position: 73-226
Cow position: chr18:5072471-5072317 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 94

Conread position: 73-226
Cow position: chr18:16997193-16997347 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 73-226
Cow position: chr18:38937761-38937914 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 73-228
Cow position: chr18:10977273-10977116 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 65

Conread position: 73-234
Cow position: chr18:56044496-56044653 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 60

Conread position: 73-308
Cow position: chr18:4673247-4673467 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 60

Conread position: 73-318
Cow position: chr18:56157651-56157905 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 24, 156

Conread position: 73-325
Cow position: chr18:22274898-22274647 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 79

Conread position: 73-326
Cow position: chr18:51212781-51213016 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 58

Conread position: 73-329
Cow position: chr18:40759146-40759386 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 25, 113

Conread position: 73-330
Cow position: chr18:5701188-5701430 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 24, 56

Conread position: 73-343
Cow position: chr18:47966984-47966707 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 54

Conread position: 74-196
Cow position: chr18:2098804-2098681 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 74-204
Cow position: chr18:28923907-28923776 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 74-213
Cow position: chr18:47125460-47125320 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 74-216
Cow position: chr18:51676149-51676008 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 91

Conread position: 74-216
Cow position: chr18:52854995-52855138 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 74-218
Cow position: chr18:45903954-45903812 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 66

Conread position: 74-219
Cow position: chr18:51850617-51850478 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 74-224
Cow position: chr18:12058943-12059088 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 29

Conread position: 74-225
Cow position: chr18:4495946-4495794 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 74-225
Cow position: chr18:12584901-12584747 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 74-225
Cow position: chr18:23447121-23446970 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 13, 143

Conread position: 74-225
Cow position: chr18:47835766-47835916 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 14

Conread position: 74-225
Cow position: chr18:52251917-52251765 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 74-226
Cow position: chr18:5647753-5647906 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 74-226
Cow position: chr18:20174189-20174038 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 129

Conread position: 74-226
Cow position: chr18:51656102-51655948 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 74-226
Cow position: chr18:51691522-51691368 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 74-226
Cow position: chr18:56159402-56159554 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 27, 95

Conread position: 74-228
Cow position: chr18:20641556-20641401 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 74-228
Cow position: chr18:47416942-47417092 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 95

Conread position: 74-240
Cow position: chr18:52649407-52649239 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 74-242
Cow position: chr18:23162833-23162994 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 45

Conread position: 74-246
Cow position: chr18:6609918-6609738 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 74-262
Cow position: chr18:43020462-43020277 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 53

Conread position: 74-271
Cow position: chr18:21102832-21102637 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 55

Conread position: 74-281
Cow position: chr18:22214428-22214636 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 74-322
Cow position: chr18:19896511-19896266 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 22, 193

Conread position: 74-326
Cow position: chr18:16378863-16379105 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 25, 147

Conread position: 74-330
Cow position: chr18:24529929-24529671 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 26, 65

Conread position: 74-331
Cow position: chr18:12270442-12270679 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 14

Conread position: 75-203
Cow position: chr18:19295829-19295950 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 24, 65

Conread position: 75-205
Cow position: chr18:2146638-2146507 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 75-215
Cow position: chr18:11377306-11377446 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 79

Conread position: 75-218
Cow position: chr18:2864049-2863905 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 75-226
Cow position: chr18:19883473-19883626 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 128
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 75-242
Cow position: chr18:1954648-1954480 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 75-242
Cow position: chr18:42747533-42747696 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 56

Conread position: 75-268
Cow position: chr18:19273155-19272961 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 75-330
Cow position: chr18:27109351-27109088 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 23, 237

Conread position: 76-204
Cow position: chr18:47565769-47565895 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 52

Conread position: 76-213
Cow position: chr18:47525350-47525488 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 76-219
Cow position: chr18:10322748-10322893 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 76-223
Cow position: chr18:46048693-46048842 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 76-225
Cow position: chr18:2773450-2773300 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 76-225
Cow position: chr18:2776953-2776803 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 76-225
Cow position: chr18:22170560-22170710 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 76-225
Cow position: chr18:55692758-55692908 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 76-226
Cow position: chr18:32883249-32883394 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 64

Conread position: 76-226
Cow position: chr18:51192798-51192647 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 76-329
Cow position: chr18:18369417-18369184 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 44

Conread position: 77-203
Cow position: chr18:14888236-14888361 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 55

Conread position: 77-215
Cow position: chr18:4757627-4757490 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 118

Conread position: 77-217
Cow position: chr18:50082314-50082173 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 77-224
Cow position: chr18:28657968-28657820 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 77-225
Cow position: chr18:44917701-44917849 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 11

Conread position: 77-226
Cow position: chr18:33883727-33883873 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 54

Conread position: 77-226
Cow position: chr18:46647213-46647067 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 53

Conread position: 77-228
Cow position: chr18:7359688-7359840 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 77-330
Cow position: chr18:37023607-37023371 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 21, 156

Conread position: 78-228
Cow position: chr18:51405960-51405816 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 78-230
Cow position: chr18:30341236-30341086 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 42

Conread position: 78-259
Cow position: chr18:25984626-25984447 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 51

Conread position: 79-224
Cow position: chr18:4203983-4203839 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 57

Conread position: 79-235
Cow position: chr18:27388529-27388685 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 100

Conread position: 79-326
Cow position: chr18:10656383-10656616 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 18, 143

Conread position: 79-328
Cow position: chr18:51867604-51867352 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 177

Conread position: 80-206
Cow position: chr18:15301088-15301215 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 68

Conread position: 80-211
Cow position: chr18:6075449-6075317 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 80-228
Cow position: chr18:4851531-4851388 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 81-223
Cow position: chr18:18919011-18918870 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 16, 66

Conread position: 82-226
Cow position: chr18:19433712-19433855 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 111, 0

Conread position: 83-204
Cow position: chr18:52003481-52003601 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 69

Conread position: 83-225
Cow position: chr18:2765202-2765341 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 87-219
Cow position: chr18:39168485-39168617 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 61

Conread position: 88-217
Cow position: chr18:4535070-4534939 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 89-331
Cow position: chr18:47963580-47963806 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 41

Conread position: 90-228
Cow position: chr18:4489951-4489813 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 93-242
Cow position: chr18:42720030-42719887 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 132, 63

Conread position: 93-322
Cow position: chr18:4467027-4466809 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 5, 135

Conread position: 93-330
Cow position: chr18:51178769-51178546 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 6, 133

Conread position: 95-225
Cow position: chr18:15613898-15613769 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 95-225
Cow position: chr18:23648884-23649013 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 95-225
Cow position: chr18:47410505-47410635 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 95-226
Cow position: chr18:18843976-18844109 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 54

Conread position: 95-235
Cow position: chr18:11657619-11657758 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 95-241
Cow position: chr18:45985663-45985518 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 115, 0

Conread position: 95-329
Cow position: chr18:11672005-11672218 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 96-219
Cow position: chr18:19158361-19158236 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 96-226
Cow position: chr18:48407702-48407832 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 98-226
Cow position: chr18:41724853-41724726 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 98-229
Cow position: chr18:29390230-29390099 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 11

Conread position: 99-219
Cow position: chr18:47872007-47872125 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 99-226
Cow position: chr18:31159307-31159177 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 100-225
Cow position: chr18:45185838-45185964 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 100-228
Cow position: chr18:19809715-19809587 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 100-326
Cow position: chr18:14090949-14091163 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 101-226
Cow position: chr18:49603076-49602950 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 103-225
Cow position: chr18:23821862-23821740 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 103-225
Cow position: chr18:45897702-45897822 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 103-316
Cow position: chr18:49982700-49982929 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 126, 0

Conread position: 104-225
Cow position: chr18:39460191-39460312 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 105-226
Cow position: chr18:3098060-3097939 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 106-225
Cow position: chr18:2108220-2108338 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 106-226
Cow position: chr18:44206111-44205991 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 27

Conread position: 106-226
Cow position: chr18:53962453-53962335 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 108-270
Cow position: chr18:19962168-19962009 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 109-258
Cow position: chr18:4796333-4796480 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 128

Conread position: 111-226
Cow position: chr18:28322635-28322749 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 111-330
Cow position: chr18:4088443-4088658 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 18

Conread position: 112-316
Cow position: chr18:55736683-55736881 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 119

Conread position: 113-326
Cow position: chr18:50612551-50612354 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 109, 0

Conread position: 113-333
Cow position: chr18:35077231-35077450 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 128, 6

Conread position: 114-326
Cow position: chr18:1581916-1581723 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 116-224
Cow position: chr18:49197402-49197510 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 118-316
Cow position: chr18:11262822-11263019 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 121-223
Cow position: chr18:23027181-23027079 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 121-242
Cow position: chr18:23921714-23921593 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 123-318
Cow position: chr18:55127944-55128141 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 133

Conread position: 130-300
Cow position: chr18:2510037-2509869 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 131-326
Cow position: chr18:33606960-33607154 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 94, 118

Conread position: 132-251
Cow position: chr18:5457296-5457177 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 135-337
Cow position: chr18:38438789-38438584 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 114, 14

Conread position: 136-329
Cow position: chr18:39267482-39267302 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 136-333
Cow position: chr18:39190493-39190299 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 21

Conread position: 146-330
Cow position: chr18:30921231-30921398 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 148-324
Cow position: chr18:49543605-49543781 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 41

Conread position: 151-324
Cow position: chr18:19882159-19881997 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 151-328
Cow position: chr18:8390208-8390375 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 159-321
Cow position: chr18:35478533-35478684 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 159-330
Cow position: chr18:35059176-35059342 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 161, 34

Conread position: 212-333
Cow position: chr18:40356898-40356775 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 216-327
Cow position: chr18:30570396-30570285 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 217-340
Cow position: chr18:45079211-45079087 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 256-330
Cow position: chr18:41553273-41553199 (view UCSC Genome Browser custom track)
Alignm length: 75
Alignm identity: 70
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.