Cow genome map

Conread name: Ss1.1-rpigcf0_010852.5

Conread position: 55-224
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 63-217
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 77

Conread position: 63-240
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 165

Conread position: 65-218
Cow position:
Alignm length: 157
Alignm identity: 126
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 11, 120

Conread position: 65-226
Cow position:
Alignm length: 163
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 65-314
Cow position:
Alignm length: 255
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 197

Conread position: 65-330
Cow position:
Alignm length: 269
Alignm identity: 191
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 56

Conread position: 65-330
Cow position:
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 66-228
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 67-210
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 68-196
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 97

Conread position: 68-217
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 8

Conread position: 68-218
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 150

Conread position: 68-229
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 65

Conread position: 68-263
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 114

Conread position: 68-331
Cow position:
Alignm length: 271
Alignm identity: 190
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 30, 215

Conread position: 69-187
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 72

Conread position: 70-226
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 77

Conread position: 70-230
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 61

Conread position: 70-249
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 59

Conread position: 71-204
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 71-217
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 71-219
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 25, 60

Conread position: 71-222
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 83

Conread position: 71-225
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 60

Conread position: 71-226
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 129

Conread position: 71-242
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 165

Conread position: 71-264
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 28, 183

Conread position: 71-273
Cow position:
Alignm length: 205
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 69

Conread position: 71-326
Cow position:
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 140

Conread position: 71-331
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 26, 14

Conread position: 72-205
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 59

Conread position: 72-214
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 72-215
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 97

Conread position: 72-216
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 72-218
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 72-219
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 126

Conread position: 72-224
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 72-224
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 72-224
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 72-224
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 20

Conread position: 72-225
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 72-225
Cow position:
Alignm length: 155
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 72-225
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 72-226
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 109

Conread position: 72-226
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 32

Conread position: 72-226
Cow position:
Alignm length: 156
Alignm identity: 125
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 72-226
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 64

Conread position: 72-228
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 72-228
Cow position:
Alignm length: 158
Alignm identity: 126
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 26, 145

Conread position: 72-230
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 68

Conread position: 72-233
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 78

Conread position: 72-270
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 142

Conread position: 72-270
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 26, 38

Conread position: 72-326
Cow position:
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 97

Conread position: 72-326
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 148

Conread position: 72-330
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 182

Conread position: 72-330
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 173

Conread position: 72-332
Cow position:
Alignm length: 262
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 75

Conread position: 72-333
Cow position:
Alignm length: 263
Alignm identity: 193
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 156

Conread position: 72-333
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 19

Conread position: 73-205
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 58

Conread position: 73-213
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 37

Conread position: 73-219
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 117

Conread position: 73-219
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 73-224
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 73-225
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 73-225
Cow position:
Alignm length: 155
Alignm identity: 125
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 73-226
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 57

Conread position: 73-241
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 144

Conread position: 73-242
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 54

Conread position: 73-250
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 153

Conread position: 73-280
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 134, 191

Conread position: 73-326
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 20, 165

Conread position: 73-329
Cow position:
Alignm length: 260
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 144

Conread position: 73-330
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 67

Conread position: 73-332
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 38

Conread position: 74-204
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 74-212
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 41

Conread position: 74-213
Cow position:
Alignm length: 141
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 74-214
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 117

Conread position: 74-218
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 74-224
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 57

Conread position: 74-226
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 55

Conread position: 74-226
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 74-326
Cow position:
Alignm length: 255
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 171

Conread position: 74-329
Cow position:
Alignm length: 276
Alignm identity: 202
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 73

Conread position: 75-210
Cow position:
Alignm length: 137
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 75-232
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 14

Conread position: 75-242
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 75

Conread position: 75-249
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 94

Conread position: 75-264
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 133

Conread position: 76-185
Cow position:
Alignm length: 111
Alignm identity: 93
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 76-212
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 119

Conread position: 76-225
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 92

Conread position: 76-326
Cow position:
Alignm length: 258
Alignm identity: 184
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 147

Conread position: 77-205
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 77-216
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 33

Conread position: 77-218
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 21, 98

Conread position: 77-242
Cow position:
Alignm length: 168
Alignm identity: 135
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 77-337
Cow position:
Alignm length: 270
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 104

Conread position: 79-226
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 79-253
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 43

Conread position: 79-330
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 118

Conread position: 79-330
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 100, 11

Conread position: 79-331
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 149

Conread position: 80-218
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 31

Conread position: 80-227
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 70

Conread position: 80-267
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 149

Conread position: 81-226
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 74

Conread position: 82-326
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 37, 21

Conread position: 83-219
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 92

Conread position: 83-319
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 14, 48

Conread position: 85-329
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 154

Conread position: 86-223
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 85

Conread position: 87-225
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 45

Conread position: 90-225
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 46

Conread position: 95-225
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 95-226
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 75

Conread position: 96-217
Cow position:
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 96-226
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 97-226
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 120, 37

Conread position: 97-237
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 100-239
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 103-226
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 77

Conread position: 103-330
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 136, 93

Conread position: 104-226
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 104-249
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 79

Conread position: 109-326
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 111-226
Cow position:
Alignm length: 116
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 111-316
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 111-331
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 116, 30

Conread position: 112-225
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 112-248
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 113-314
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 159

Conread position: 117-242
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 121-262
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 134, 58

Conread position: 122-288
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 123-328
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 6

Conread position: 123-333
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 120, 0

Conread position: 152-330
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 161-303
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 77

Show alignments to all cow chromosomes.