Cow genome map

Conread name: Ss1.1-rpigcf0_010852.5

Conread position: 58-330
Cow position: chr29:26672954-26672701 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 40, 13

Conread position: 60-226
Cow position: chr29:17109916-17110081 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 13, 70

Conread position: 60-330
Cow position: chr29:11042390-11042641 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 38, 16

Conread position: 64-226
Cow position: chr29:501157-501321 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 49

Conread position: 64-226
Cow position: chr29:19949271-19949431 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 8

Conread position: 64-226
Cow position: chr29:43251206-43251041 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 64-324
Cow position: chr29:22175645-22175882 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 65-210
Cow position: chr29:1229570-1229715 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 65-216
Cow position: chr29:32894226-32894377 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 16

Conread position: 65-219
Cow position: chr29:28195554-28195404 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 60

Conread position: 65-226
Cow position: chr29:13639405-13639242 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 65-242
Cow position: chr29:5995132-5994956 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 96

Conread position: 65-242
Cow position: chr29:13028407-13028580 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 5

Conread position: 65-242
Cow position: chr29:30918511-30918690 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 65-260
Cow position: chr29:11434080-11434280 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 65-330
Cow position: chr29:13373259-13373519 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 159

Conread position: 65-333
Cow position: chr29:11705081-11705334 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 59

Conread position: 65-345
Cow position: chr29:42760410-42760688 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 75

Conread position: 66-226
Cow position: chr29:34687798-34687959 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 67-226
Cow position: chr29:31934343-31934503 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 68-204
Cow position: chr29:8686295-8686432 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 68-226
Cow position: chr29:6286197-6286037 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 68-228
Cow position: chr29:18450170-18450014 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 68-249
Cow position: chr29:1022261-1022444 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 136

Conread position: 68-328
Cow position: chr29:25333494-25333246 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 8, 74

Conread position: 68-330
Cow position: chr29:31813909-31814176 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 25, 38

Conread position: 69-217
Cow position: chr29:26017538-26017387 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 69-221
Cow position: chr29:9912141-9912293 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 5, 122

Conread position: 69-225
Cow position: chr29:28979532-28979380 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 62

Conread position: 69-325
Cow position: chr29:22936238-22936478 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 53

Conread position: 70-204
Cow position: chr29:18012525-18012660 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 70-226
Cow position: chr29:32799738-32799587 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 140, 29

Conread position: 70-235
Cow position: chr29:8004957-8004794 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 38

Conread position: 70-250
Cow position: chr29:23697945-23698129 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 7

Conread position: 70-323
Cow position: chr29:2263025-2262790 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 28, 70

Conread position: 70-330
Cow position: chr29:11397960-11397715 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 6, 19

Conread position: 71-168
Cow position: chr29:2071604-2071505 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 71-205
Cow position: chr29:17154747-17154881 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 113
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 27, 66

Conread position: 71-206
Cow position: chr29:17222381-17222518 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 71-210
Cow position: chr29:27873572-27873709 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 71-213
Cow position: chr29:27819187-27819329 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 28, 129

Conread position: 71-215
Cow position: chr29:4120822-4120967 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 71-222
Cow position: chr29:24624218-24624369 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 41

Conread position: 71-222
Cow position: chr29:40117540-40117691 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 20

Conread position: 71-224
Cow position: chr29:36357097-36357248 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 64

Conread position: 71-225
Cow position: chr29:16278956-16279104 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 63

Conread position: 71-225
Cow position: chr29:37618272-37618429 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 71-226
Cow position: chr29:12025499-12025352 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 58

Conread position: 71-226
Cow position: chr29:31928957-31929111 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 27, 90

Conread position: 71-232
Cow position: chr29:5186525-5186363 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 71-232
Cow position: chr29:43544634-43544473 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 26, 41

Conread position: 71-240
Cow position: chr29:12680124-12680290 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 133

Conread position: 71-256
Cow position: chr29:31981799-31981985 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 157

Conread position: 72-204
Cow position: chr29:32290578-32290711 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 72-205
Cow position: chr29:12626007-12625873 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 72-217
Cow position: chr29:42630090-42630234 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 113

Conread position: 72-223
Cow position: chr29:32926072-32926225 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 72-223
Cow position: chr29:36217084-36217233 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 68

Conread position: 72-224
Cow position: chr29:7310646-7310795 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 68

Conread position: 72-225
Cow position: chr29:7103527-7103681 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 72-225
Cow position: chr29:17297105-17297259 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 122

Conread position: 72-225
Cow position: chr29:17804504-17804657 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 88

Conread position: 72-225
Cow position: chr29:22519158-22519004 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 109

Conread position: 72-225
Cow position: chr29:23874429-23874583 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 72-225
Cow position: chr29:39038300-39038144 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 17

Conread position: 72-226
Cow position: chr29:1325412-1325564 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 59

Conread position: 72-226
Cow position: chr29:4070597-4070748 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 59

Conread position: 72-226
Cow position: chr29:9310569-9310724 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 72-226
Cow position: chr29:34359008-34358854 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 16

Conread position: 72-226
Cow position: chr29:40852897-40853054 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 72-226
Cow position: chr29:41530819-41530973 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 26, 123

Conread position: 72-226
Cow position: chr29:42883988-42883833 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 9

Conread position: 72-227
Cow position: chr29:43183344-43183188 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 72-228
Cow position: chr29:40791279-40791429 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 59

Conread position: 72-229
Cow position: chr29:17409304-17409462 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 72-230
Cow position: chr29:15947136-15947295 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 72-231
Cow position: chr29:4085282-4085438 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 57

Conread position: 72-232
Cow position: chr29:39567655-39567809 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 61

Conread position: 72-239
Cow position: chr29:19428628-19428795 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 112

Conread position: 72-240
Cow position: chr29:29324451-29324288 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 68

Conread position: 72-242
Cow position: chr29:847673-847502 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 43

Conread position: 72-250
Cow position: chr29:23825639-23825819 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 147

Conread position: 72-321
Cow position: chr29:13867241-13866990 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 27, 150

Conread position: 72-326
Cow position: chr29:16365919-16365658 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 26, 10

Conread position: 72-326
Cow position: chr29:30188368-30188137 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 43

Conread position: 72-329
Cow position: chr29:10156332-10156069 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 27, 46

Conread position: 72-330
Cow position: chr29:16195811-16196053 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 25, 50

Conread position: 72-330
Cow position: chr29:42771616-42771851 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 43

Conread position: 72-333
Cow position: chr29:40096935-40097182 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 71

Conread position: 72-333
Cow position: chr29:40994921-40994678 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 70

Conread position: 73-192
Cow position: chr29:40903145-40903265 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 73-211
Cow position: chr29:35501684-35501544 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 73-217
Cow position: chr29:5520515-5520370 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 73-218
Cow position: chr29:21443368-21443222 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 117

Conread position: 73-219
Cow position: chr29:5210462-5210608 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 25, 75

Conread position: 73-224
Cow position: chr29:22613400-22613549 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 114

Conread position: 73-225
Cow position: chr29:16609718-16609871 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 73-225
Cow position: chr29:22068770-22068620 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 120

Conread position: 73-226
Cow position: chr29:25737444-25737289 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 73-226
Cow position: chr29:26540566-26540414 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 132, 13

Conread position: 73-328
Cow position: chr29:6844662-6844414 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 34

Conread position: 73-330
Cow position: chr29:8926491-8926252 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 20, 146

Conread position: 73-330
Cow position: chr29:24252209-24252465 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 41

Conread position: 74-198
Cow position: chr29:19559048-19558923 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 74-218
Cow position: chr29:5788999-5789145 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 6, 77

Conread position: 74-219
Cow position: chr29:21645289-21645426 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 54

Conread position: 74-225
Cow position: chr29:396384-396529 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 57

Conread position: 74-231
Cow position: chr29:21196681-21196519 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 74-241
Cow position: chr29:21285331-21285498 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 86

Conread position: 74-241
Cow position: chr29:28775488-28775324 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 57

Conread position: 74-242
Cow position: chr29:12783989-12783823 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 66

Conread position: 74-260
Cow position: chr29:6293507-6293325 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 106

Conread position: 74-330
Cow position: chr29:40299049-40298798 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 161

Conread position: 74-345
Cow position: chr29:683519-683244 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 22, 116

Conread position: 75-192
Cow position: chr29:41365083-41365199 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 61

Conread position: 75-216
Cow position: chr29:11053887-11053745 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 58

Conread position: 75-225
Cow position: chr29:23243905-23243755 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 75-234
Cow position: chr29:4874911-4874747 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 101

Conread position: 75-330
Cow position: chr29:11647067-11647312 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 24

Conread position: 76-203
Cow position: chr29:28868612-28868744 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 76-226
Cow position: chr29:22778202-22778048 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 65

Conread position: 76-230
Cow position: chr29:24188092-24187937 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 76-249
Cow position: chr29:26654073-26653895 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 76-330
Cow position: chr29:749932-749693 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 95

Conread position: 77-218
Cow position: chr29:34359847-34359705 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 11, 37

Conread position: 77-222
Cow position: chr29:4423465-4423318 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 77-266
Cow position: chr29:2056035-2056230 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 77-330
Cow position: chr29:39329629-39329385 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 158

Conread position: 77-333
Cow position: chr29:31200233-31200476 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 11

Conread position: 79-186
Cow position: chr29:31651387-31651496 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 79-225
Cow position: chr29:11915803-11915943 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 52

Conread position: 80-225
Cow position: chr29:34745680-34745536 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 27

Conread position: 80-231
Cow position: chr29:32656115-32655961 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 18, 112

Conread position: 81-340
Cow position: chr29:38580958-38581200 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 61

Conread position: 82-225
Cow position: chr29:1220152-1220008 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 83-225
Cow position: chr29:3292928-3293070 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 112

Conread position: 84-215
Cow position: chr29:37046720-37046588 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 84-324
Cow position: chr29:11527808-11527578 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 56

Conread position: 87-226
Cow position: chr29:9378621-9378761 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 88-204
Cow position: chr29:22162264-22162147 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 88-225
Cow position: chr29:16200493-16200355 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 88-225
Cow position: chr29:22723586-22723724 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 89-226
Cow position: chr29:16672478-16672613 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 133, 110

Conread position: 90-280
Cow position: chr29:19176925-19176726 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 67, 175

Conread position: 94-330
Cow position: chr29:18579842-18579621 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 95-223
Cow position: chr29:29308578-29308449 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 95-226
Cow position: chr29:19125315-19125446 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 95-226
Cow position: chr29:23825217-23825086 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 95-226
Cow position: chr29:36781311-36781180 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 95-248
Cow position: chr29:12452789-12452939 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 95-327
Cow position: chr29:34760420-34760206 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 95-328
Cow position: chr29:19061782-19061566 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 8, 91

Conread position: 96-219
Cow position: chr29:19244465-19244341 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 96-223
Cow position: chr29:4022998-4023119 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 96-238
Cow position: chr29:22735111-22734971 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 114, 43

Conread position: 98-226
Cow position: chr29:24051385-24051258 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 98-330
Cow position: chr29:28734140-28733911 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 31

Conread position: 100-217
Cow position: chr29:629536-629653 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 101-217
Cow position: chr29:18878482-18878366 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-232
Cow position: chr29:40615493-40615367 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 102-242
Cow position: chr29:19060082-19059943 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 102-332
Cow position: chr29:2730286-2730080 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 227, 28

Conread position: 103-203
Cow position: chr29:39285496-39285596 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 103-225
Cow position: chr29:19187027-19187149 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 105-336
Cow position: chr29:3590468-3590694 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 77, 51

Conread position: 108-330
Cow position: chr29:11673170-11673406 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 107, 34

Conread position: 111-225
Cow position: chr29:8190191-8190077 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 111-248
Cow position: chr29:703204-703068 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 111-343
Cow position: chr29:19742463-19742683 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 112-216
Cow position: chr29:5652950-5653054 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 112-331
Cow position: chr29:17022160-17022381 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 116-222
Cow position: chr29:26207989-26208095 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 116-242
Cow position: chr29:33393692-33393818 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 116-330
Cow position: chr29:29940654-29940866 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 102

Conread position: 118-330
Cow position: chr29:37990984-37990789 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 103

Conread position: 122-242
Cow position: chr29:26631061-26631181 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 131-248
Cow position: chr29:30424770-30424653 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 133-226
Cow position: chr29:17663730-17663637 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 147-331
Cow position: chr29:6034096-6033914 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 117, 0

Conread position: 151-356
Cow position: chr29:8767928-8768124 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 88

Conread position: 162-355
Cow position: chr29:31476767-31476584 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 14, 66

Conread position: 164-326
Cow position: chr29:2623444-2623286 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 172-324
Cow position: chr29:18294415-18294565 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 210-331
Cow position: chr29:29176284-29176164 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 216-333
Cow position: chr29:2523268-2523385 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 237-333
Cow position: chr29:2720950-2720854 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 238-333
Cow position: chr29:7395699-7395603 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 6, 0

Show alignments to all cow chromosomes.