Cow genome map

Conread name: Ss1.1-rpigcf0_010852.5

Conread position: 23-225
Cow position: chr5:9170631-9170433 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 47

Conread position: 32-332
Cow position: chr5:59873128-59872808 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 56-242
Cow position: chr5:46509886-46509696 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 57-333
Cow position: chr5:3204818-3205086 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 11

Conread position: 59-225
Cow position: chr5:56070843-56071011 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 59-226
Cow position: chr5:57230354-57230185 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 64-217
Cow position: chr5:5257297-5257145 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 15

Conread position: 64-228
Cow position: chr5:57686748-57686583 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 65-205
Cow position: chr5:44848034-44847890 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 65-213
Cow position: chr5:57767994-57767848 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 46

Conread position: 65-217
Cow position: chr5:18062329-18062176 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 65-218
Cow position: chr5:36868728-36868879 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 5

Conread position: 65-221
Cow position: chr5:50871802-50871964 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 65-222
Cow position: chr5:11229682-11229525 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 54

Conread position: 65-224
Cow position: chr5:34915062-34914903 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 11

Conread position: 65-225
Cow position: chr5:3589019-3589178 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 82

Conread position: 65-225
Cow position: chr5:50723034-50723197 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 65-225
Cow position: chr5:53710699-53710538 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 65-226
Cow position: chr5:62172402-62172564 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 24

Conread position: 65-226
Cow position: chr5:66366500-66366667 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 82

Conread position: 65-227
Cow position: chr5:14904078-14903916 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 11

Conread position: 65-230
Cow position: chr5:63234834-63234674 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 53

Conread position: 65-249
Cow position: chr5:458477-458663 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 16, 94

Conread position: 65-333
Cow position: chr5:40559623-40559906 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 66-226
Cow position: chr5:43858431-43858268 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 84

Conread position: 67-225
Cow position: chr5:33560742-33560583 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 68-222
Cow position: chr5:71494814-71494969 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 68-225
Cow position: chr5:30276683-30276841 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 68-230
Cow position: chr5:72045681-72045521 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 72

Conread position: 68-240
Cow position: chr5:29771520-29771692 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 12, 154

Conread position: 68-249
Cow position: chr5:45273508-45273328 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 30, 127

Conread position: 68-313
Cow position: chr5:58555129-58555365 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 15, 154

Conread position: 68-330
Cow position: chr5:13537131-13537384 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 6, 82

Conread position: 69-230
Cow position: chr5:56028546-56028385 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 59

Conread position: 69-235
Cow position: chr5:19752301-19752463 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 62

Conread position: 69-245
Cow position: chr5:36855198-36855377 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 83

Conread position: 69-249
Cow position: chr5:54060272-54060451 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 45

Conread position: 69-264
Cow position: chr5:55129337-55129533 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 29, 0

Conread position: 69-323
Cow position: chr5:60599212-60598968 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 123

Conread position: 70-219
Cow position: chr5:4220975-4221122 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 18

Conread position: 70-222
Cow position: chr5:1396594-1396747 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 125

Conread position: 70-225
Cow position: chr5:57150659-57150818 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 70-226
Cow position: chr5:26549145-26548985 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 70-226
Cow position: chr5:50824587-50824743 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 146

Conread position: 70-331
Cow position: chr5:24069385-24069639 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 26, 43

Conread position: 71-195
Cow position: chr5:58793611-58793486 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 71-215
Cow position: chr5:57419798-57419653 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 71-218
Cow position: chr5:56287505-56287358 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 11

Conread position: 71-218
Cow position: chr5:56613568-56613419 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 71-224
Cow position: chr5:54350365-54350211 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 71-225
Cow position: chr5:30253736-30253892 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 71-225
Cow position: chr5:35126051-35126206 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 71-226
Cow position: chr5:16206157-16206003 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 47

Conread position: 71-226
Cow position: chr5:20288267-20288108 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 71-226
Cow position: chr5:47601808-47601964 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 71-229
Cow position: chr5:45574614-45574775 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 71-235
Cow position: chr5:6683367-6683207 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 60

Conread position: 71-235
Cow position: chr5:43929739-43929575 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 47

Conread position: 71-240
Cow position: chr5:46023068-46022897 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 10

Conread position: 71-242
Cow position: chr5:35969529-35969700 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 22, 41

Conread position: 71-242
Cow position: chr5:65776389-65776216 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 71-253
Cow position: chr5:15479122-15479304 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 109

Conread position: 71-253
Cow position: chr5:26477021-26476839 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 35

Conread position: 71-259
Cow position: chr5:60908662-60908849 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 43

Conread position: 71-266
Cow position: chr5:69731502-69731694 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 152, 38

Conread position: 71-281
Cow position: chr5:50526258-50526474 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 71-321
Cow position: chr5:41545897-41545650 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 59

Conread position: 71-322
Cow position: chr5:51490249-51489999 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 47

Conread position: 71-322
Cow position: chr5:57156320-57156082 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 123

Conread position: 71-322
Cow position: chr5:58446803-58447046 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 137

Conread position: 71-323
Cow position: chr5:54767912-54767664 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 149, 0

Conread position: 71-324
Cow position: chr5:46322802-46322565 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 25, 47

Conread position: 71-326
Cow position: chr5:13717572-13717338 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 35

Conread position: 71-326
Cow position: chr5:23678703-23678459 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 69

Conread position: 71-326
Cow position: chr5:49440875-49440630 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 29, 119

Conread position: 71-328
Cow position: chr5:31640421-31640670 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 127

Conread position: 71-333
Cow position: chr5:27293888-27293619 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 72-205
Cow position: chr5:40237211-40237342 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 22

Conread position: 72-205
Cow position: chr5:64758770-64758636 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 72-206
Cow position: chr5:6528680-6528817 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 72-210
Cow position: chr5:57935111-57934972 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 72-210
Cow position: chr5:62142673-62142812 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 72-211
Cow position: chr5:65679973-65679836 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 66

Conread position: 72-213
Cow position: chr5:37757838-37757700 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 33

Conread position: 72-213
Cow position: chr5:76366298-76366156 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 72-216
Cow position: chr5:28035741-28035884 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 71

Conread position: 72-216
Cow position: chr5:43402902-43403045 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 123

Conread position: 72-217
Cow position: chr5:69383252-69383396 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 17

Conread position: 72-219
Cow position: chr5:22242775-22242620 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 76

Conread position: 72-219
Cow position: chr5:37808666-37808518 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 123
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 72-219
Cow position: chr5:47323461-47323607 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 26, 8

Conread position: 72-221
Cow position: chr5:52000220-52000365 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 59

Conread position: 72-222
Cow position: chr5:64027022-64026871 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 72-223
Cow position: chr5:4280443-4280597 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 72-223
Cow position: chr5:29828043-29828193 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 129
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 26, 114

Conread position: 72-223
Cow position: chr5:41165085-41165237 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 72-224
Cow position: chr5:14629813-14629655 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 72-224
Cow position: chr5:49474548-49474394 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 72-225
Cow position: chr5:2309559-2309407 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 125

Conread position: 72-225
Cow position: chr5:26097290-26097439 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 72-225
Cow position: chr5:35247113-35246959 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 21

Conread position: 72-225
Cow position: chr5:42064202-42064356 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 72-225
Cow position: chr5:52165180-52165028 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 24, 82

Conread position: 72-225
Cow position: chr5:57062532-57062375 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 139

Conread position: 72-225
Cow position: chr5:67212358-67212513 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 125

Conread position: 72-226
Cow position: chr5:15470931-15471081 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 72-226
Cow position: chr5:30629162-30629005 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 125

Conread position: 72-226
Cow position: chr5:30805162-30805316 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 68

Conread position: 72-226
Cow position: chr5:44054055-44053902 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 135, 88

Conread position: 72-226
Cow position: chr5:51053655-51053496 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 72-226
Cow position: chr5:56334511-56334360 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 68

Conread position: 72-226
Cow position: chr5:56860444-56860593 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 73

Conread position: 72-226
Cow position: chr5:57074334-57074178 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 72-226
Cow position: chr5:60183800-60183958 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 72-226
Cow position: chr5:64592098-64591943 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 19

Conread position: 72-226
Cow position: chr5:69337817-69337972 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 72-227
Cow position: chr5:26990393-26990541 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 37

Conread position: 72-228
Cow position: chr5:16939597-16939438 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 72-229
Cow position: chr5:60715366-60715213 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 72-230
Cow position: chr5:39937113-39937271 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 46

Conread position: 72-232
Cow position: chr5:58519419-58519258 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 72-242
Cow position: chr5:44994043-44993879 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 24, 56

Conread position: 72-243
Cow position: chr5:39447538-39447364 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 26, 168

Conread position: 72-244
Cow position: chr5:21039981-21039816 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 64

Conread position: 72-245
Cow position: chr5:32394596-32394772 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 72-248
Cow position: chr5:57489948-57489777 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 145
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 25, 59

Conread position: 72-250
Cow position: chr5:28224449-28224627 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 6, 93

Conread position: 72-255
Cow position: chr5:9090026-9089849 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 26, 108

Conread position: 72-256
Cow position: chr5:9369273-9369089 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 9

Conread position: 72-280
Cow position: chr5:30561929-30562145 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 192

Conread position: 72-324
Cow position: chr5:61875540-61875774 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 72-326
Cow position: chr5:51935187-51935442 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 82

Conread position: 72-330
Cow position: chr5:5111077-5110817 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 209

Conread position: 72-330
Cow position: chr5:41294078-41294324 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 7, 46

Conread position: 72-330
Cow position: chr5:49342052-49341809 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 26, 146

Conread position: 72-330
Cow position: chr5:63987448-63987191 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 75

Conread position: 72-331
Cow position: chr5:29912415-29912666 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 117

Conread position: 72-331
Cow position: chr5:45148369-45148116 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 68

Conread position: 72-333
Cow position: chr5:23168829-23168574 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 189

Conread position: 72-333
Cow position: chr5:45420140-45419860 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 0

Conread position: 72-333
Cow position: chr5:53855697-53855948 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 162

Conread position: 72-333
Cow position: chr5:59325841-59325589 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 55, 13

Conread position: 72-333
Cow position: chr5:63656474-63656755 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 106, 252

Conread position: 72-345
Cow position: chr5:50821781-50822046 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 25, 16

Conread position: 73-201
Cow position: chr5:56467689-56467817 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 92

Conread position: 73-201
Cow position: chr5:60188988-60189120 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 73-206
Cow position: chr5:48867466-48867332 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 73-208
Cow position: chr5:23527633-23527496 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 73-212
Cow position: chr5:26262676-26262541 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 58

Conread position: 73-213
Cow position: chr5:7723663-7723804 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 73-216
Cow position: chr5:34624957-34625102 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 73-217
Cow position: chr5:34528549-34528689 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 59

Conread position: 73-219
Cow position: chr5:38717308-38717454 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 63

Conread position: 73-223
Cow position: chr5:17384152-17384007 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 64

Conread position: 73-224
Cow position: chr5:5855856-5856008 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 73-224
Cow position: chr5:20995094-20994936 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 73-225
Cow position: chr5:2469209-2469061 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 96

Conread position: 73-225
Cow position: chr5:6520009-6520161 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 116

Conread position: 73-225
Cow position: chr5:45225815-45225665 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 26, 72

Conread position: 73-225
Cow position: chr5:55756422-55756264 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 73-225
Cow position: chr5:67634519-67634361 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 73-226
Cow position: chr5:17602202-17602053 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 73-226
Cow position: chr5:21828866-21829019 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 94

Conread position: 73-226
Cow position: chr5:39035778-39035930 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 117

Conread position: 73-226
Cow position: chr5:50575782-50575935 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 98

Conread position: 73-226
Cow position: chr5:55955906-55956064 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 137

Conread position: 73-226
Cow position: chr5:59626973-59626820 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 117

Conread position: 73-226
Cow position: chr5:67118418-67118572 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 73-233
Cow position: chr5:57101524-57101365 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 56

Conread position: 73-240
Cow position: chr5:2827372-2827538 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 69

Conread position: 73-293
Cow position: chr5:57737097-57737310 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 146

Conread position: 73-330
Cow position: chr5:43992322-43992577 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 164

Conread position: 73-330
Cow position: chr5:58856101-58856374 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 24, 75

Conread position: 73-331
Cow position: chr5:56428313-56428064 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 23, 63

Conread position: 74-204
Cow position: chr5:45574366-45574235 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 74-219
Cow position: chr5:65552709-65552572 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 74-224
Cow position: chr5:55795968-55795816 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 74-225
Cow position: chr5:4031990-4031835 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 74-226
Cow position: chr5:20779396-20779245 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 44

Conread position: 74-226
Cow position: chr5:52852970-52853123 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 74-230
Cow position: chr5:63627527-63627381 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 63

Conread position: 74-234
Cow position: chr5:11668187-11668025 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 74-239
Cow position: chr5:66972428-66972594 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 74-241
Cow position: chr5:33273693-33273858 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 5, 71

Conread position: 74-242
Cow position: chr5:52108269-52108100 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 107

Conread position: 74-245
Cow position: chr5:54086540-54086712 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 30

Conread position: 74-264
Cow position: chr5:63427006-63426814 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 156

Conread position: 74-318
Cow position: chr5:56339022-56338777 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 226

Conread position: 74-326
Cow position: chr5:54311335-54311578 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 177

Conread position: 74-347
Cow position: chr5:37646544-37646279 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 95

Conread position: 75-210
Cow position: chr5:4267670-4267806 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 75-216
Cow position: chr5:16214687-16214829 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 75-218
Cow position: chr5:44163369-44163224 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 75-219
Cow position: chr5:49501824-49501679 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 126
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 23, 0

Conread position: 75-223
Cow position: chr5:27306307-27306454 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 136, 18

Conread position: 75-225
Cow position: chr5:61049332-61049483 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 119

Conread position: 75-225
Cow position: chr5:65752860-65753012 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 75-226
Cow position: chr5:40109493-40109644 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 75

Conread position: 75-233
Cow position: chr5:17566438-17566279 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 39, 30

Conread position: 75-319
Cow position: chr5:34300919-34301159 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 23, 56

Conread position: 75-326
Cow position: chr5:44874193-44874444 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 117

Conread position: 75-341
Cow position: chr5:3771850-3772113 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 35

Conread position: 75-353
Cow position: chr5:4166642-4166914 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 24, 69

Conread position: 76-217
Cow position: chr5:72564765-72564907 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 76-221
Cow position: chr5:56153618-56153762 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 52

Conread position: 76-225
Cow position: chr5:18574176-18574325 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 74

Conread position: 76-225
Cow position: chr5:38168897-38169046 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 9

Conread position: 76-226
Cow position: chr5:29353124-29352974 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 114

Conread position: 76-247
Cow position: chr5:14920928-14920756 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 17

Conread position: 76-249
Cow position: chr5:41981373-41981543 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 56

Conread position: 76-256
Cow position: chr5:41713300-41713479 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 43

Conread position: 76-262
Cow position: chr5:4710150-4709964 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 60

Conread position: 76-293
Cow position: chr5:55019293-55019521 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 10, 184

Conread position: 77-215
Cow position: chr5:28230164-28230305 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 77-224
Cow position: chr5:39258510-39258656 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 63

Conread position: 77-224
Cow position: chr5:59627102-59627250 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 77-226
Cow position: chr5:30949913-30949763 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 77-226
Cow position: chr5:50943153-50943004 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 14

Conread position: 77-326
Cow position: chr5:43844661-43844418 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 133

Conread position: 77-330
Cow position: chr5:11562721-11562466 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 52

Conread position: 77-330
Cow position: chr5:26726226-26725967 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 87

Conread position: 78-218
Cow position: chr5:44796730-44796589 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 78-225
Cow position: chr5:5016432-5016576 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 53

Conread position: 78-234
Cow position: chr5:55068709-55068866 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 79-241
Cow position: chr5:3743326-3743487 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 121

Conread position: 79-330
Cow position: chr5:31434290-31434529 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 104

Conread position: 80-333
Cow position: chr5:49685266-49685038 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 92

Conread position: 81-326
Cow position: chr5:42623171-42622918 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 11

Conread position: 82-226
Cow position: chr5:60948140-60948284 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 60

Conread position: 82-318
Cow position: chr5:56361803-56362025 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 58

Conread position: 82-331
Cow position: chr5:26723455-26723697 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 86

Conread position: 84-225
Cow position: chr5:2240980-2240840 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 38

Conread position: 85-226
Cow position: chr5:54436767-54436905 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 88-331
Cow position: chr5:9859406-9859150 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 88-331
Cow position: chr5:24136728-24136961 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 15, 82

Conread position: 88-342
Cow position: chr5:44726321-44726077 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 11, 134

Conread position: 88-351
Cow position: chr5:35647356-35647623 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 11, 244

Conread position: 89-238
Cow position: chr5:25035240-25035094 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 18

Conread position: 90-225
Cow position: chr5:7177166-7177302 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 93-331
Cow position: chr5:29148910-29149129 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 94-328
Cow position: chr5:34115998-34116213 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 94-330
Cow position: chr5:30235902-30236135 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 8

Conread position: 95-224
Cow position: chr5:44446844-44446715 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 95-224
Cow position: chr5:54375481-54375352 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 95-225
Cow position: chr5:38040543-38040413 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 95-225
Cow position: chr5:54312622-54312752 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 95-242
Cow position: chr5:5847824-5847678 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 95-333
Cow position: chr5:55849906-55850129 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 96-225
Cow position: chr5:35190132-35190261 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 96-331
Cow position: chr5:38382777-38382549 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 106, 0

Conread position: 97-227
Cow position: chr5:37842256-37842125 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 97-228
Cow position: chr5:44722489-44722359 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 98-244
Cow position: chr5:44752284-44752135 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 98-333
Cow position: chr5:56539275-56539488 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 99-226
Cow position: chr5:51490577-51490450 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 99-228
Cow position: chr5:51277828-51277700 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 100-225
Cow position: chr5:16185404-16185529 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 100-226
Cow position: chr5:36822913-36823035 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 100-328
Cow position: chr5:45037276-45037487 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 100-333
Cow position: chr5:20882598-20882387 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 101-217
Cow position: chr5:17644599-17644485 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 101-227
Cow position: chr5:44734698-44734572 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 102-217
Cow position: chr5:30638551-30638435 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 102-226
Cow position: chr5:49821456-49821579 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 102-228
Cow position: chr5:16668725-16668849 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 102-330
Cow position: chr5:57744896-57744684 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 120

Conread position: 103-225
Cow position: chr5:57497396-57497273 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 103-226
Cow position: chr5:19079281-19079401 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 104-226
Cow position: chr5:51125979-51125856 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 104-240
Cow position: chr5:64843941-64843805 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 105-224
Cow position: chr5:4347673-4347554 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 105-226
Cow position: chr5:4864574-4864694 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 105-245
Cow position: chr5:70353953-70353812 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 106-226
Cow position: chr5:17086988-17086868 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 45

Conread position: 106-330
Cow position: chr5:4956580-4956356 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 110-330
Cow position: chr5:54068005-54067775 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 45, 5

Conread position: 110-330
Cow position: chr5:56485110-56485318 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 111-330
Cow position: chr5:38647677-38647882 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 116, 0

Conread position: 113-223
Cow position: chr5:1946870-1946979 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 113-324
Cow position: chr5:36671640-36671854 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 117-226
Cow position: chr5:29979915-29979806 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 117-240
Cow position: chr5:60126733-60126856 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 118-328
Cow position: chr5:4336336-4336549 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 116, 208

Conread position: 118-328
Cow position: chr5:52063323-52063119 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 121-333
Cow position: chr5:25531259-25531457 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 121-333
Cow position: chr5:52887234-52887029 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 122-219
Cow position: chr5:65745717-65745621 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 125-230
Cow position: chr5:60207759-60207863 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 125-233
Cow position: chr5:52029458-52029563 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 126-226
Cow position: chr5:58401621-58401721 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 131-353
Cow position: chr5:29860389-29860625 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 72

Conread position: 132-264
Cow position: chr5:54154144-54154016 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 133-324
Cow position: chr5:14354134-14354312 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 133-330
Cow position: chr5:33256415-33256228 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 133-344
Cow position: chr5:28324394-28324601 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 65, 29

Conread position: 136-260
Cow position: chr5:1090760-1090636 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 136-326
Cow position: chr5:66237898-66238084 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 142-330
Cow position: chr5:50799815-50800001 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 68, 111

Conread position: 146-327
Cow position: chr5:32086976-32086801 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 151-330
Cow position: chr5:68593987-68594161 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 155-326
Cow position: chr5:51018758-51018929 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 99, 65

Conread position: 156-333
Cow position: chr5:29831461-29831288 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 160-331
Cow position: chr5:34922900-34922736 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 161-327
Cow position: chr5:5028816-5028979 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 172-326
Cow position: chr5:43166325-43166468 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 177-332
Cow position: chr5:61811293-61811444 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 0

Show alignments to all cow chromosomes.