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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_010910.5
        

               
Conread position:
               
156-511
               

               
Cow position:
               
chr13:15528788-15529156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 223
               

               
Conread position:
               
184-521
               

               
Cow position:
               
chr13:19223861-19223526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
85, 203
               

               
Conread position:
               
188-524
               

               
Cow position:
               
chr13:1959217-1958876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
189-367
               

               
Cow position:
               
chr13:1766975-1766800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
189-374
               

               
Cow position:
               
chr13:6894301-6894115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
78, 62
               

               
Conread position:
               
189-380
               

               
Cow position:
               
chr13:24539703-24539509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 184
               

               
Conread position:
               
189-429
               

               
Cow position:
               
chr13:19138644-19138415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
107, 71
               

               
Conread position:
               
189-432
               

               
Cow position:
               
chr13:11767835-11768076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
134, 78
               

               
Conread position:
               
189-433
               

               
Cow position:
               
chr13:9665282-9665026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 229
               

               
Conread position:
               
189-438
               

               
Cow position:
               
chr13:50690185-50690435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
189-438
               

               
Cow position:
               
chr13:57002938-57002688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
43, 196
               

               
Conread position:
               
189-438
               

               
Cow position:
               
chr13:60329957-60329720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
189-441
               

               
Cow position:
               
chr13:47216045-47216298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
92, 191
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr13:20466085-20466332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
134, 63
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr13:26383024-26383282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 179
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr13:29814748-29814491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
189-453
               

               
Cow position:
               
chr13:12574841-12574587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
189-501
               

               
Cow position:
               
chr13:46284413-46284716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
114, 32
               

               
Conread position:
               
189-506
               

               
Cow position:
               
chr13:7010676-7010360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
84, 134
               

               
Conread position:
               
189-511
               

               
Cow position:
               
chr13:6060800-6061127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
189-514
               

               
Cow position:
               
chr13:17800279-17799958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
189-520
               

               
Cow position:
               
chr13:16343893-16343566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
189-520
               

               
Cow position:
               
chr13:17347014-17346682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 63
               

               
Conread position:
               
189-520
               

               
Cow position:
               
chr13:17886708-17886390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
207, 90
               

               
Conread position:
               
189-523
               

               
Cow position:
               
chr13:54095013-54094679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
189-524
               

               
Cow position:
               
chr13:8245125-8245463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 112
               

               
Conread position:
               
189-524
               

               
Cow position:
               
chr13:15257171-15257499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 112
               

               
Conread position:
               
189-525
               

               
Cow position:
               
chr13:7076463-7076124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
189-525
               

               
Cow position:
               
chr13:35718927-35719271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
51, 157
               

               
Conread position:
               
189-526
               

               
Cow position:
               
chr13:26480007-26480338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
189-527
               

               
Cow position:
               
chr13:55843691-55843350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
189-528
               

               
Cow position:
               
chr13:18852283-18851945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 80
               

               
Conread position:
               
190-421
               

               
Cow position:
               
chr13:25248937-25249179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 183
               

               
Conread position:
               
190-487
               

               
Cow position:
               
chr13:6759584-6759884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
191-354
               

               
Cow position:
               
chr13:21402590-21402753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 130
               

               
Conread position:
               
191-373
               

               
Cow position:
               
chr13:54331224-54331043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
79, 150
               

               
Conread position:
               
191-392
               

               
Cow position:
               
chr13:46458827-46458626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 64
               

               
Conread position:
               
191-428
               

               
Cow position:
               
chr13:47863494-47863731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 148
               

               
Conread position:
               
191-433
               

               
Cow position:
               
chr13:5091456-5091702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 224
               

               
Conread position:
               
191-438
               

               
Cow position:
               
chr13:4208609-4208856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 117
               

               
Conread position:
               
191-438
               

               
Cow position:
               
chr13:21155284-21155532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 189
               

               
Conread position:
               
191-443
               

               
Cow position:
               
chr13:4604499-4604248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
191-446
               

               
Cow position:
               
chr13:37521175-37521422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
76, 82
               

               
Conread position:
               
191-447
               

               
Cow position:
               
chr13:41253820-41253574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
191-507
               

               
Cow position:
               
chr13:48626954-48626648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 85
               

               
Conread position:
               
191-508
               

               
Cow position:
               
chr13:17622489-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
191-514
               

               
Cow position:
               
chr13:13261213-13260881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 198
               

               
Conread position:
               
191-518
               

               
Cow position:
               
chr13:52285021-52284690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
41, 146
               

               
Conread position:
               
191-520
               

               
Cow position:
               
chr13:28683564-28683234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
239, 59
               

               
Conread position:
               
191-525
               

               
Cow position:
               
chr13:57475212-57475539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
191-527
               

               
Cow position:
               
chr13:45073730-45074049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
177, 46
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr13:2414231-2413893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
110, 60
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr13:6079214-6079549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr13:9593712-9593370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr13:17977534-17977218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
262, 57
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr13:21276060-21275723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr13:42200824-42200483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 138
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr13:44202194-44201874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
231, 73
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr13:51821687-51822010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
235, 73
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr13:51940936-51940598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 59
               

               
Conread position:
               
192-339
               

               
Cow position:
               
chr13:16155513-16155664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-339
               

               
Cow position:
               
chr13:50681605-50681752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
192-346
               

               
Cow position:
               
chr13:21524633-21524475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 148
               

               
Conread position:
               
192-350
               

               
Cow position:
               
chr13:52637486-52637334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
192-352
               

               
Cow position:
               
chr13:33054191-33054350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
192-357
               

               
Cow position:
               
chr13:37985546-37985719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-358
               

               
Cow position:
               
chr13:57323658-57323492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
192-359
               

               
Cow position:
               
chr13:11147510-11147340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 70
               

               
Conread position:
               
192-359
               

               
Cow position:
               
chr13:15740273-15740101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-360
               

               
Cow position:
               
chr13:20536704-20536537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
192-366
               

               
Cow position:
               
chr13:51014976-51015156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-372
               

               
Cow position:
               
chr13:34556129-34556312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr13:6606817-6606999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr13:21708385-21708209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr13:26261590-26261776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr13:26697899-26698083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr13:32017318-32017503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr13:37516932-37517114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 82
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr13:54381730-54381914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
192-376
               

               
Cow position:
               
chr13:16292750-16292563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 68
               

               
Conread position:
               
192-376
               

               
Cow position:
               
chr13:21210066-21209881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 141
               

               
Conread position:
               
192-380
               

               
Cow position:
               
chr13:53195088-53195273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
109, 56
               

               
Conread position:
               
192-382
               

               
Cow position:
               
chr13:15872653-15872461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
192-382
               

               
Cow position:
               
chr13:18551652-18551458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
192-387
               

               
Cow position:
               
chr13:27027564-27027765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
192-387
               

               
Cow position:
               
chr13:36948966-36949162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 148
               

               
Conread position:
               
192-401
               

               
Cow position:
               
chr13:11947524-11947743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-403
               

               
Cow position:
               
chr13:38012565-38012350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
80, 175
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr13:37795638-37795439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
192-408
               

               
Cow position:
               
chr13:15172203-15172422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
192-412
               

               
Cow position:
               
chr13:14544326-14544104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
77, 195
               

               
Conread position:
               
192-413
               

               
Cow position:
               
chr13:7257605-7257383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 139
               

               
Conread position:
               
192-415
               

               
Cow position:
               
chr13:54237550-54237338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
192-421
               

               
Cow position:
               
chr13:562934-563164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
46, 189
               

               
Conread position:
               
192-422
               

               
Cow position:
               
chr13:24060146-24060358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
192-424
               

               
Cow position:
               
chr13:51108695-51108467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
103, 63
               

               
Conread position:
               
192-426
               

               
Cow position:
               
chr13:52199293-52199060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr13:3003651-3003401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr13:25261604-25261840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 137
               

               
Conread position:
               
192-429
               

               
Cow position:
               
chr13:54093944-54093716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
192-431
               

               
Cow position:
               
chr13:3701637-3701408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
192-432
               

               
Cow position:
               
chr13:13266006-13265774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
192-435
               

               
Cow position:
               
chr13:20563201-20562958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
192-436
               

               
Cow position:
               
chr13:24376694-24376457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
192-437
               

               
Cow position:
               
chr13:43194379-43194138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
177, 69
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr13:1155504-1155742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr13:4464211-4463970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
80, 130
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr13:9906947-9906697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
73, 193
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr13:12682337-12682584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 163
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr13:16833874-16834113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr13:21039394-21039641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr13:33517720-33517963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr13:37521528-37521782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 181
               

               
Conread position:
               
192-440
               

               
Cow position:
               
chr13:61170511-61170758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 185
               

               
Conread position:
               
192-443
               

               
Cow position:
               
chr13:17815975-17815735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
81, 75
               

               
Conread position:
               
192-445
               

               
Cow position:
               
chr13:1011536-1011287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
192-445
               

               
Cow position:
               
chr13:20605915-20606162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 82
               

               
Conread position:
               
192-446
               

               
Cow position:
               
chr13:12408079-12408335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 41
               

               
Conread position:
               
192-446
               

               
Cow position:
               
chr13:15041268-15041519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
192-446
               

               
Cow position:
               
chr13:23166892-23167147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
192-446
               

               
Cow position:
               
chr13:58043833-58043582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
192-446
               

               
Cow position:
               
chr13:59687675-59687924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:1780037-1779782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:2463025-2463282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
110, 75
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:7059679-7059415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 185
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:9643678-9643934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
81, 152
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:12045129-12045385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 122
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:12614464-12614205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 182
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:15234116-15233879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:17855578-17855325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:18244060-18243815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:19023635-19023895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:20649779-20650033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:30693905-30693667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:31808716-31808474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:34035572-34035319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
52, 161
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:34941452-34941697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:40652137-40651887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:42114225-42113972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:44626584-44626321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 159
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:45604214-45604463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 124
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:49805179-49804928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 181
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:52227896-52228147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
112, 63
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:52284113-52283865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
120, 106
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:54344980-54344730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 185
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:55295421-55295674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:59170861-59170606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr13:60341018-60340759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
83, 173
               

               
Conread position:
               
192-449
               

               
Cow position:
               
chr13:52922292-52922046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
192-451
               

               
Cow position:
               
chr13:889975-890220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
192-451
               

               
Cow position:
               
chr13:2774328-2774080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
192-451
               

               
Cow position:
               
chr13:16024793-16024538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
192-451
               

               
Cow position:
               
chr13:19033750-19033507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
192-455
               

               
Cow position:
               
chr13:43184669-43184928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
192-458
               

               
Cow position:
               
chr13:25531584-25531847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 73
               

               
Conread position:
               
192-461
               

               
Cow position:
               
chr13:18989909-18989664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
192-462
               

               
Cow position:
               
chr13:22115908-22115630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
163, 73
               

               
Conread position:
               
192-462
               

               
Cow position:
               
chr13:24155745-24155466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
153, 73
               

               
Conread position:
               
192-474
               

               
Cow position:
               
chr13:19426494-19426775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
192-506
               

               
Cow position:
               
chr13:10932756-10932437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
192-508
               

               
Cow position:
               
chr13:6153575-6153900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
82, 196
               

               
Conread position:
               
192-508
               

               
Cow position:
               
chr13:47963997-47964297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
192-509
               

               
Cow position:
               
chr13:10988866-10989187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 187
               

               
Conread position:
               
192-511
               

               
Cow position:
               
chr13:8524418-8524742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
192-511
               

               
Cow position:
               
chr13:22085547-22085865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 61
               

               
Conread position:
               
192-512
               

               
Cow position:
               
chr13:15974814-15974497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
192-512
               

               
Cow position:
               
chr13:34263169-34263489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
192-513
               

               
Cow position:
               
chr13:43480265-43479938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 187
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr13:12202569-12202240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr13:17114176-17114499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 20
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr13:17745443-17745126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr13:18835390-18835082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
259, 45
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr13:20683918-20684250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr13:46525238-46525548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 50
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr13:51528242-51528560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
192-515
               

               
Cow position:
               
chr13:12670241-12670574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
192-517
               

               
Cow position:
               
chr13:7663225-7663546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
256, 51
               

               
Conread position:
               
192-519
               

               
Cow position:
               
chr13:18166934-18166605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 61
               

               
Conread position:
               
192-519
               

               
Cow position:
               
chr13:26098349-26098054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr13:11460829-11460505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 130
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr13:11820782-11820471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
249, 41
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr13:15884809-15885148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 190
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr13:20679549-20679211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr13:20839771-20839438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 187
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr13:20863814-20864124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr13:25926996-25926662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr13:34995122-34995457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 128
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr13:5713498-5713186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr13:11061191-11060858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr13:17970830-17971158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 48
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr13:23270009-23270334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr13:33256700-33256372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
196, 69
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr13:43594911-43595232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr13:55674001-55674337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 180
               

               
Conread position:
               
192-522
               

               
Cow position:
               
chr13:32167101-32167440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
192-523
               

               
Cow position:
               
chr13:25434925-25435254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
192-523
               

               
Cow position:
               
chr13:46112171-46111838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:8362542-8362875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 156
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:9265614-9265958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 176
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:9974864-9975208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
80, 208
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:12546701-12547040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
53, 182
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:15446250-15445915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:18172544-18172204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:19610372-19610696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
79, 113
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:21241888-21242216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:23960602-23960934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 187
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:25547389-25547714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
260, 59
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:27525057-27525392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 183
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:36877276-36876929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
177, 75
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:37484066-37484411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 155
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:37592734-37593079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:37804083-37803759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:41806980-41806640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:48037824-48037491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr13:57769815-57770119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 40
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr13:15869323-15868981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr13:40722506-40722840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr13:16015011-16014677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
257, 65
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr13:20705998-20706339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 183
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr13:25695564-25695901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr13:30026316-30025995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
110, 69
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr13:38329834-38329482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr13:52585816-52586170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
103, 115
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr13:60429874-60430211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr13:60974282-60973946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr13:971694-972032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 64
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr13:17821055-17821405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 188
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr13:20378133-20378457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr13:21235481-21235806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr13:36771221-36771555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr13:37981548-37981878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr13:38277933-38278282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 61
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr13:43762369-43762034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 59
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr13:44323106-44322767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 149
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr13:47007532-47007852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
259, 45
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr13:48251788-48252098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr13:56154957-56155286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:152155-151827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:1042752-1043098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 313
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:2192912-2192595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
112, 65
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:3315470-3315811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 95
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:4553003-4552681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:5263082-5263417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:6616544-6616895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 119
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:6974364-6974026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:8609343-8609683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
53, 39
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:9142488-9142145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 45
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:9246918-9246596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
193, 63
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:9587379-9587717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
77, 160
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:10924703-10925055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:12448785-12449122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:12875781-12876108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:13089228-13088894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 117
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:13765972-13765654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
265, 44
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:14063320-14063659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 77
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:14927443-14927126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
80, 168
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:15192690-15193022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
238, 69
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:17021516-17021861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 198
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:17439562-17439904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 183
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:20666182-20666522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 70
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:20784792-20784454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 73
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:20820636-20820973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
265, 65
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:20880723-20881063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:21107328-21107011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
142, 10
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:21287886-21288223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 67
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:23479233-23478894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:23856419-23856075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:24369788-24369446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 141
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:24586251-24585910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:24754088-24753751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:34261436-34261095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
123, 69
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:34281884-34281540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 183
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:34728633-34728973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:35526013-35526331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 48
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:35659957-35659623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 75
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:37069553-37069209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:37382014-37381665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 200
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:38872768-38873080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
257, 59
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:40943452-40943105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 193
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:42229532-42229177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 150
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:45023004-45023347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 170
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:45353250-45352895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
106, 75
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:48598108-48597771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr13:56686631-56686297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
193-352
               

               
Cow position:
               
chr13:33875865-33875711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
193-357
               

               
Cow position:
               
chr13:38485034-38484871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 74
               

               
Conread position:
               
193-374
               

               
Cow position:
               
chr13:30651378-30651200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
193-386
               

               
Cow position:
               
chr13:34508079-34507888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
193-412
               

               
Cow position:
               
chr13:42860367-42860582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 110
               

               
Conread position:
               
193-419
               

               
Cow position:
               
chr13:5278986-5279212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
107, 68
               

               
Conread position:
               
193-421
               

               
Cow position:
               
chr13:6975587-6975816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 153
               

               
Conread position:
               
193-429
               

               
Cow position:
               
chr13:47313110-47312888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
193-436
               

               
Cow position:
               
chr13:5752220-5752464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
193-447
               

               
Cow position:
               
chr13:25062613-25062366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 158
               

               
Conread position:
               
193-447
               

               
Cow position:
               
chr13:46324587-46324836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
193-519
               

               
Cow position:
               
chr13:12990050-12989723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
193-520
               

               
Cow position:
               
chr13:31814070-31813747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
258, 58
               

               
Conread position:
               
193-521
               

               
Cow position:
               
chr13:21176120-21176448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
193-521
               

               
Cow position:
               
chr13:23667466-23667124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
193-527
               

               
Cow position:
               
chr13:13465587-13465901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 73
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr13:6189427-6189736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
263, 47
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr13:17291927-17292268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr13:19393490-19393156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
182, 74
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr13:52894347-52894011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
194-418
               

               
Cow position:
               
chr13:9884970-9884749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
194-424
               

               
Cow position:
               
chr13:53536103-53536332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 73
               

               
Conread position:
               
194-429
               

               
Cow position:
               
chr13:34052399-34052618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
194-438
               

               
Cow position:
               
chr13:13339066-13338818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr13:5658528-5658773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr13:17613548-17613294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr13:61166256-61166498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
194-457
               

               
Cow position:
               
chr13:19178478-19178216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
194-514
               

               
Cow position:
               
chr13:57493981-57494311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 91
               

               
Conread position:
               
194-517
               

               
Cow position:
               
chr13:311632-311313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
194-517
               

               
Cow position:
               
chr13:47356829-47356527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
184, 60
               

               
Conread position:
               
194-521
               

               
Cow position:
               
chr13:61976761-61977078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 182
               

               
Conread position:
               
194-523
               

               
Cow position:
               
chr13:10845795-10845473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
271, 67
               

               
Conread position:
               
194-524
               

               
Cow position:
               
chr13:37818555-37818883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
194-524
               

               
Cow position:
               
chr13:52057741-52057425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
194-526
               

               
Cow position:
               
chr13:19022480-19022137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 50
               

               
Conread position:
               
194-527
               

               
Cow position:
               
chr13:10928788-10929123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 137
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr13:11096374-11096046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr13:15281734-15282070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr13:15288724-15289057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr13:32283329-32282992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr13:38283782-38284115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 141
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr13:55315987-55316333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
195-365
               

               
Cow position:
               
chr13:60393498-60393669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
195-388
               

               
Cow position:
               
chr13:60690521-60690718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
195-413
               

               
Cow position:
               
chr13:1170669-1170455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
195-413
               

               
Cow position:
               
chr13:16247854-16247644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
195-428
               

               
Cow position:
               
chr13:20041760-20041998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
195-429
               

               
Cow position:
               
chr13:4423279-4423518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
195-429
               

               
Cow position:
               
chr13:15958822-15958591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
195-438
               

               
Cow position:
               
chr13:30794022-30793779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 174
               

               
Conread position:
               
195-446
               

               
Cow position:
               
chr13:8838793-8839036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 78
               

               
Conread position:
               
195-447
               

               
Cow position:
               
chr13:23099912-23099659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 186
               

               
Conread position:
               
195-447
               

               
Cow position:
               
chr13:61188736-61188486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
195-457
               

               
Cow position:
               
chr13:20509933-20509687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
195-477
               

               
Cow position:
               
chr13:47756575-47756295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
84, 185
               

               
Conread position:
               
195-487
               

               
Cow position:
               
chr13:11954912-11955212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
155, 54
               

               
Conread position:
               
195-516
               

               
Cow position:
               
chr13:12283039-12282703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 211
               

               
Conread position:
               
195-520
               

               
Cow position:
               
chr13:15167024-15166690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 196
               

               
Conread position:
               
195-524
               

               
Cow position:
               
chr13:6086699-6087024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
75, 112
               

               
Conread position:
               
195-527
               

               
Cow position:
               
chr13:13501418-13501752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 107
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr13:547689-547359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
78, 47
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr13:4664661-4664992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr13:19882834-19883172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 51
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr13:25817714-25817391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 42
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr13:54702392-54702043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 192
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr13:56148742-56148385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
75, 205
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr13:56160225-56160582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
77, 205
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr13:61990133-61990460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
196-430
               

               
Cow position:
               
chr13:1231851-1231616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
85, 179
               

               
Conread position:
               
196-431
               

               
Cow position:
               
chr13:20497852-20497621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
196-435
               

               
Cow position:
               
chr13:52749288-52749509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
196-521
               

               
Cow position:
               
chr13:24230413-24230085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
196-526
               

               
Cow position:
               
chr13:13176849-13176513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
196-528
               

               
Cow position:
               
chr13:46181989-46181655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
197-520
               

               
Cow position:
               
chr13:17158672-17159006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 182
               

               
Conread position:
               
197-524
               

               
Cow position:
               
chr13:26369725-26369392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
198-525
               

               
Cow position:
               
chr13:12207241-12206916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
238, 67
               

               
Conread position:
               
199-447
               

               
Cow position:
               
chr13:8652240-8652489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
199-526
               

               
Cow position:
               
chr13:24715439-24715107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
199-528
               

               
Cow position:
               
chr13:53566796-53566465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 180
               

               
Conread position:
               
201-453
               

               
Cow position:
               
chr13:55583395-55583141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 180
               

               
Conread position:
               
201-528
               

               
Cow position:
               
chr13:2404939-2404626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
9, 168
               

               
Conread position:
               
205-363
               

               
Cow position:
               
chr13:22025518-22025675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
205-520
               

               
Cow position:
               
chr13:25537838-25537495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 200
               

               
Conread position:
               
207-366
               

               
Cow position:
               
chr13:22276977-22277140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 145
               

               
Conread position:
               
207-374
               

               
Cow position:
               
chr13:5079036-5079201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
207-418
               

               
Cow position:
               
chr13:32669021-32668809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 187
               

               
Conread position:
               
207-520
               

               
Cow position:
               
chr13:14771650-14771324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
66, 191
               

               
Conread position:
               
207-527
               

               
Cow position:
               
chr13:15195020-15195338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
207-528
               

               
Cow position:
               
chr13:15991033-15991367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
57, 176
               

               
Conread position:
               
207-528
               

               
Cow position:
               
chr13:21283517-21283840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
207-528
               

               
Cow position:
               
chr13:48165240-48165562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
164, 43
               

               
Conread position:
               
208-446
               

               
Cow position:
               
chr13:38089865-38090101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
64, 178
               

               
Conread position:
               
208-447
               

               
Cow position:
               
chr13:13306290-13306045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
67, 175
               

               
Conread position:
               
209-362
               

               
Cow position:
               
chr13:2113872-2113716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
209-447
               

               
Cow position:
               
chr13:13577843-13578080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
209-463
               

               
Cow position:
               
chr13:36396981-36397236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 160
               

               
Conread position:
               
209-505
               

               
Cow position:
               
chr13:40533073-40532785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
211-418
               

               
Cow position:
               
chr13:43839362-43839561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
211-447
               

               
Cow position:
               
chr13:12618924-12619162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 169
               

               
Conread position:
               
211-528
               

               
Cow position:
               
chr13:47186409-47186098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
210, 49
               

               
Conread position:
               
212-464
               

               
Cow position:
               
chr13:50546036-50545785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
212-526
               

               
Cow position:
               
chr13:6540129-6540449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
212-528
               

               
Cow position:
               
chr13:13320964-13320661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
213-414
               

               
Cow position:
               
chr13:21189464-21189260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
213-419
               

               
Cow position:
               
chr13:52858764-52858560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 146
               

               
Conread position:
               
213-441
               

               
Cow position:
               
chr13:62474616-62474840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
59, 103
               

               
Conread position:
               
213-514
               

               
Cow position:
               
chr13:49503345-49503654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 69
               

               
Conread position:
               
213-520
               

               
Cow position:
               
chr13:5082837-5082523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 94
               

               
Conread position:
               
214-521
               

               
Cow position:
               
chr13:19188486-19188172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 164
               

               
Conread position:
               
214-528
               

               
Cow position:
               
chr13:52055414-52055728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
215-518
               

               
Cow position:
               
chr13:5758164-5758469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
229, 40
               

               
Conread position:
               
216-447
               

               
Cow position:
               
chr13:34375449-34375212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
216-528
               

               
Cow position:
               
chr13:966257-965963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 116
               

               
Conread position:
               
218-508
               

               
Cow position:
               
chr13:49022692-49022984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 106
               

               
Conread position:
               
218-528
               

               
Cow position:
               
chr13:20231022-20231326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
219-514
               

               
Cow position:
               
chr13:15110501-15110192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
220-527
               

               
Cow position:
               
chr13:53574145-53573834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 43
               

               
Conread position:
               
224-528
               

               
Cow position:
               
chr13:20473515-20473821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
226-438
               

               
Cow position:
               
chr13:4420517-4420304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
227-354
               

               
Cow position:
               
chr13:58743120-58743246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
227-447
               

               
Cow position:
               
chr13:29831265-29831478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 16
               

               
Conread position:
               
231-512
               

               
Cow position:
               
chr13:15903182-15902904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
231-527
               

               
Cow position:
               
chr13:45726057-45725751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
237-447
               

               
Cow position:
               
chr13:14870693-14870485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
238-447
               

               
Cow position:
               
chr13:20440433-20440628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
240-382
               

               
Cow position:
               
chr13:22030249-22030104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
240-435
               

               
Cow position:
               
chr13:7790175-7789972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
5, 66
               

               
Conread position:
               
240-447
               

               
Cow position:
               
chr13:13954232-13954440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
240-458
               

               
Cow position:
               
chr13:28652959-28652745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
240-524
               

               
Cow position:
               
chr13:54583037-54582742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
241-447
               

               
Cow position:
               
chr13:41154877-41155080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
241-528
               

               
Cow position:
               
chr13:60375330-60375624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
10, 144
               

               
Conread position:
               
243-524
               

               
Cow position:
               
chr13:26366034-26365773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
244-455
               

               
Cow position:
               
chr13:36346127-36345918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 134
               

               
Conread position:
               
244-520
               

               
Cow position:
               
chr13:21135748-21136033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
247-523
               

               
Cow position:
               
chr13:26743276-26743016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
51, 131
               

               
Conread position:
               
248-528
               

               
Cow position:
               
chr13:37640738-37640454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
249-436
               

               
Cow position:
               
chr13:16711781-16711591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
249-520
               

               
Cow position:
               
chr13:54388870-54389149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 137
               

               
Conread position:
               
251-520
               

               
Cow position:
               
chr13:26698348-26698626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 139
               

               
Conread position:
               
251-524
               

               
Cow position:
               
chr13:18696991-18696709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
251-528
               

               
Cow position:
               
chr13:17568950-17569238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
252-447
               

               
Cow position:
               
chr13:23512515-23512323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 135
               

               
Conread position:
               
253-456
               

               
Cow position:
               
chr13:20128812-20128611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
253-522
               

               
Cow position:
               
chr13:6441953-6442235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
254-527
               

               
Cow position:
               
chr13:8374626-8374908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
255-518
               

               
Cow position:
               
chr13:17966064-17966335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
255-528
               

               
Cow position:
               
chr13:18058104-18058383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 258
               

               
Conread position:
               
257-528
               

               
Cow position:
               
chr13:11381579-11381859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
259-528
               

               
Cow position:
               
chr13:11260405-11260139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
260-447
               

               
Cow position:
               
chr13:6455508-6455328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
261-528
               

               
Cow position:
               
chr13:5910760-5911031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 112
               

               
Conread position:
               
270-528
               

               
Cow position:
               
chr13:20288457-20288202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
183, 103
               

               
Conread position:
               
271-528
               

               
Cow position:
               
chr13:1569049-1568796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
186, 146
               

               
Conread position:
               
272-465
               

               
Cow position:
               
chr13:12745796-12745608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
273-446
               

               
Cow position:
               
chr13:10098867-10099034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
273-514
               

               
Cow position:
               
chr13:15144248-15144487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
273-521
               

               
Cow position:
               
chr13:28552720-28552461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 238
               

               
Conread position:
               
273-524
               

               
Cow position:
               
chr13:6389504-6389264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 112
               

               
Conread position:
               
273-526
               

               
Cow position:
               
chr13:626684-626438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
273-528
               

               
Cow position:
               
chr13:20217264-20217534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
273-528
               

               
Cow position:
               
chr13:51115904-51116161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 50
               

               
Conread position:
               
276-504
               

               
Cow position:
               
chr13:34555711-34555940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
175, 69
               

               
Conread position:
               
278-520
               

               
Cow position:
               
chr13:18995247-18994998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
278-525
               

               
Cow position:
               
chr13:15194613-15194868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
129, 98
               

               
Conread position:
               
278-525
               

               
Cow position:
               
chr13:19279209-19278962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 7
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr13:14576325-14576077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
170, 65
               

               
Conread position:
               
283-514
               

               
Cow position:
               
chr13:56678129-56677893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
283-526
               

               
Cow position:
               
chr13:8402169-8401921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
286-520
               

               
Cow position:
               
chr13:19320646-19320404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
147, 97
               

               
Conread position:
               
288-447
               

               
Cow position:
               
chr13:32826347-32826505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
290-528
               

               
Cow position:
               
chr13:20155107-20154865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
292-528
               

               
Cow position:
               
chr13:8355302-8355069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
165, 30
               

               
Conread position:
               
292-528
               

               
Cow position:
               
chr13:12974907-12974678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
161, 18
               

               
Conread position:
               
300-524
               

               
Cow position:
               
chr13:16714165-16714396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 125
               

               
Conread position:
               
305-520
               

               
Cow position:
               
chr13:46329512-46329734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
149, 71
               

               
Conread position:
               
305-521
               

               
Cow position:
               
chr13:23526201-23525983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
151, 40
               

               
Conread position:
               
305-528
               

               
Cow position:
               
chr13:13297766-13297543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
146, 14
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr13:3211642-3211413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr13:52477555-52477782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
307-524
               

               
Cow position:
               
chr13:17110309-17110095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
307-528
               

               
Cow position:
               
chr13:45073167-45073391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 40
               

               
Conread position:
               
308-447
               

               
Cow position:
               
chr13:20871478-20871337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 87
               

               
Conread position:
               
309-505
               

               
Cow position:
               
chr13:48862008-48862208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
142, 67
               

               
Conread position:
               
309-526
               

               
Cow position:
               
chr13:50568329-50568538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
145, 67
               

               
Conread position:
               
315-514
               

               
Cow position:
               
chr13:11397377-11397570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
316-527
               

               
Cow position:
               
chr13:827323-827111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 60
               

               
Conread position:
               
317-435
               

               
Cow position:
               
chr13:7149308-7149191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
320-528
               

               
Cow position:
               
chr13:62008189-62007971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
322-519
               

               
Cow position:
               
chr13:20868681-20868878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
323-520
               

               
Cow position:
               
chr13:9981767-9981968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
118, 53
               

               
Conread position:
               
331-520
               

               
Cow position:
               
chr13:84648-84449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
333-520
               

               
Cow position:
               
chr13:20314555-20314750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
336-524
               

               
Cow position:
               
chr13:18197546-18197740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 40
               

               
Conread position:
               
338-514
               

               
Cow position:
               
chr13:18181714-18181897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
113, 47
               

               
Conread position:
               
338-528
               

               
Cow position:
               
chr13:35557046-35557247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
341-525
               

               
Cow position:
               
chr13:45108356-45108548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
342-520
               

               
Cow position:
               
chr13:19007987-19007807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
342-528
               

               
Cow position:
               
chr13:17350408-17350219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
347-528
               

               
Cow position:
               
chr13:17611500-17611691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
104, 31
               

               
Conread position:
               
354-519
               

               
Cow position:
               
chr13:28440492-28440662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
354-528
               

               
Cow position:
               
chr13:55494477-55494662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
361-520
               

               
Cow position:
               
chr13:16160458-16160291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
361-528
               

               
Cow position:
               
chr13:38035872-38035701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
365-528
               

               
Cow position:
               
chr13:45439560-45439394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
382-528
               

               
Cow position:
               
chr13:1462279-1462428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
384-524
               

               
Cow position:
               
chr13:37621344-37621489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
384-527
               

               
Cow position:
               
chr13:3209305-3209456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
386-528
               

               
Cow position:
               
chr13:15083673-15083529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 127
               

               
Conread position:
               
389-518
               

               
Cow position:
               
chr13:52880857-52880991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
418-528
               

               
Cow position:
               
chr13:21277485-21277603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               
Show alignments to all cow chromosomes.