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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_010910.5
        

               
Conread position:
               
182-438
               

               
Cow position:
               
chr22:19040601-19040343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 189
               

               
Conread position:
               
187-520
               

               
Cow position:
               
chr22:10632688-10633024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
87, 171
               

               
Conread position:
               
188-433
               

               
Cow position:
               
chr22:14986247-14986000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 183
               

               
Conread position:
               
189-363
               

               
Cow position:
               
chr22:3713040-3713213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
107, 80
               

               
Conread position:
               
189-371
               

               
Cow position:
               
chr22:15623093-15623280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 136
               

               
Conread position:
               
189-381
               

               
Cow position:
               
chr22:10683890-10683695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
81, 177
               

               
Conread position:
               
189-419
               

               
Cow position:
               
chr22:37554851-37554618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 130
               

               
Conread position:
               
189-429
               

               
Cow position:
               
chr22:28179618-28179869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
189-431
               

               
Cow position:
               
chr22:4994146-4993904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 210
               

               
Conread position:
               
189-438
               

               
Cow position:
               
chr22:14118749-14119001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 200
               

               
Conread position:
               
189-439
               

               
Cow position:
               
chr22:44835417-44835670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 194
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr22:1696630-1696888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 45
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr22:4650956-4651206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
134, 83
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr22:15951101-15950834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 17
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr22:36563248-36562990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 198
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr22:42605407-42605666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
189-483
               

               
Cow position:
               
chr22:19738803-19738508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
80, 217
               

               
Conread position:
               
189-494
               

               
Cow position:
               
chr22:30954814-30955101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
189-511
               

               
Cow position:
               
chr22:9520921-9521245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
178, 72
               

               
Conread position:
               
189-520
               

               
Cow position:
               
chr22:2913053-2913387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
134, 80
               

               
Conread position:
               
189-520
               

               
Cow position:
               
chr22:23861372-23861046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 83
               

               
Conread position:
               
189-520
               

               
Cow position:
               
chr22:26941573-26941899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
189-523
               

               
Cow position:
               
chr22:42612232-42612572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
90, 148
               

               
Conread position:
               
189-525
               

               
Cow position:
               
chr22:42933713-42933375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
81, 203
               

               
Conread position:
               
189-526
               

               
Cow position:
               
chr22:4161838-4161504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 124
               

               
Conread position:
               
189-528
               

               
Cow position:
               
chr22:11697433-11697077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 214
               

               
Conread position:
               
189-528
               

               
Cow position:
               
chr22:13840912-13841258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 83
               

               
Conread position:
               
189-528
               

               
Cow position:
               
chr22:30049798-30049448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 191
               

               
Conread position:
               
190-447
               

               
Cow position:
               
chr22:11746131-11745874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 133
               

               
Conread position:
               
191-335
               

               
Cow position:
               
chr22:34986325-34986186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
191-354
               

               
Cow position:
               
chr22:4026385-4026545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
191-354
               

               
Cow position:
               
chr22:14005929-14006091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
191-428
               

               
Cow position:
               
chr22:39303229-39302989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
191-438
               

               
Cow position:
               
chr22:39293970-39293723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
74, 165
               

               
Conread position:
               
191-446
               

               
Cow position:
               
chr22:5337821-5337570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
191-467
               

               
Cow position:
               
chr22:33918122-33917850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 82
               

               
Conread position:
               
191-513
               

               
Cow position:
               
chr22:19787903-19787581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
191-514
               

               
Cow position:
               
chr22:13300186-13300515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 164
               

               
Conread position:
               
191-519
               

               
Cow position:
               
chr22:5384432-5384761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
174, 60
               

               
Conread position:
               
191-523
               

               
Cow position:
               
chr22:2403649-2403993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr22:13286221-13286567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr22:37029826-37029490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 130
               

               
Conread position:
               
192-312
               

               
Cow position:
               
chr22:28120569-28120692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 119
               

               
Conread position:
               
192-320
               

               
Cow position:
               
chr22:13889694-13889819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
192-321
               

               
Cow position:
               
chr22:4138329-4138196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
192-329
               

               
Cow position:
               
chr22:40590667-40590806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-330
               

               
Cow position:
               
chr22:33985988-33985847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-330
               

               
Cow position:
               
chr22:41980304-41980163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
192-333
               

               
Cow position:
               
chr22:8357392-8357532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
192-343
               

               
Cow position:
               
chr22:852807-852956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
192-343
               

               
Cow position:
               
chr22:30583268-30583420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
192-347
               

               
Cow position:
               
chr22:15292918-15292768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
192-349
               

               
Cow position:
               
chr22:34930970-34930810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-352
               

               
Cow position:
               
chr22:15919857-15919692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
192-352
               

               
Cow position:
               
chr22:19376488-19376645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
104, 44
               

               
Conread position:
               
192-355
               

               
Cow position:
               
chr22:21526814-21526652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
192-357
               

               
Cow position:
               
chr22:35474130-35474297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 123
               

               
Conread position:
               
192-362
               

               
Cow position:
               
chr22:36761408-36761575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 48
               

               
Conread position:
               
192-363
               

               
Cow position:
               
chr22:11987439-11987266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-363
               

               
Cow position:
               
chr22:31194851-31195025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-367
               

               
Cow position:
               
chr22:21905272-21905447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
153, 80
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr22:1609978-1609799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 80
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr22:20687071-20687263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr22:25476841-25477019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr22:30472824-30473005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr22:34665829-34666007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 44
               

               
Conread position:
               
192-375
               

               
Cow position:
               
chr22:19848618-19848435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
192-383
               

               
Cow position:
               
chr22:1791766-1791960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
192-394
               

               
Cow position:
               
chr22:33949224-33949017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr22:4337882-4338099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-407
               

               
Cow position:
               
chr22:1342516-1342727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
192-408
               

               
Cow position:
               
chr22:8063548-8063331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 180
               

               
Conread position:
               
192-412
               

               
Cow position:
               
chr22:35902917-35902702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
195, 45
               

               
Conread position:
               
192-412
               

               
Cow position:
               
chr22:36546153-36545931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 195
               

               
Conread position:
               
192-413
               

               
Cow position:
               
chr22:2010577-2010797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
192-414
               

               
Cow position:
               
chr22:45685255-45685024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
192-415
               

               
Cow position:
               
chr22:14602617-14602394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 66
               

               
Conread position:
               
192-418
               

               
Cow position:
               
chr22:18654275-18654043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 160
               

               
Conread position:
               
192-420
               

               
Cow position:
               
chr22:29256537-29256308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 198
               

               
Conread position:
               
192-421
               

               
Cow position:
               
chr22:9734633-9734858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 69
               

               
Conread position:
               
192-423
               

               
Cow position:
               
chr22:1822097-1821866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
104, 176
               

               
Conread position:
               
192-426
               

               
Cow position:
               
chr22:14816647-14816423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
192-427
               

               
Cow position:
               
chr22:45271359-45271592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
192-427
               

               
Cow position:
               
chr22:47582684-47582908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr22:25341798-25342026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
103, 73
               

               
Conread position:
               
192-429
               

               
Cow position:
               
chr22:6360710-6360475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
192-431
               

               
Cow position:
               
chr22:1974373-1974136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 42
               

               
Conread position:
               
192-432
               

               
Cow position:
               
chr22:12777805-12777577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 55
               

               
Conread position:
               
192-432
               

               
Cow position:
               
chr22:33094339-33094577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
192-434
               

               
Cow position:
               
chr22:7153668-7153900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
192-435
               

               
Cow position:
               
chr22:23806768-23806524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 166
               

               
Conread position:
               
192-436
               

               
Cow position:
               
chr22:17307005-17307245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
42, 46
               

               
Conread position:
               
192-436
               

               
Cow position:
               
chr22:18126957-18126715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
106, 74
               

               
Conread position:
               
192-437
               

               
Cow position:
               
chr22:13670392-13670153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 58
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr22:23403863-23403626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr22:36539895-36539643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
83, 94
               

               
Conread position:
               
192-439
               

               
Cow position:
               
chr22:6960646-6960866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
192-442
               

               
Cow position:
               
chr22:11500556-11500803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
68, 187
               

               
Conread position:
               
192-442
               

               
Cow position:
               
chr22:17993252-17993007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
192-442
               

               
Cow position:
               
chr22:23865239-23865494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 184
               

               
Conread position:
               
192-442
               

               
Cow position:
               
chr22:28370724-28370970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
192-444
               

               
Cow position:
               
chr22:13950950-13951205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 204
               

               
Conread position:
               
192-445
               

               
Cow position:
               
chr22:4988781-4988533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 122
               

               
Conread position:
               
192-445
               

               
Cow position:
               
chr22:8418246-8418488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
192-445
               

               
Cow position:
               
chr22:39494425-39494170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 170
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:295159-294904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
103, 169
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:1266161-1265895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:1484640-1484892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:2470469-2470211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:3993388-3993639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:4043711-4043962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:4108961-4108701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:4990394-4990138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
80, 186
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:5290621-5290879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:5467591-5467332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:7838383-7838620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
175, 66
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:7851737-7851993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 172
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:8283759-8284010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:10920086-10919823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 190
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:10983122-10983379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 138
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:11146680-11146939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
84, 238
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:12682014-12681771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:16273408-16273669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 182
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:16812385-16812135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:19340977-19341230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
81, 185
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:22222970-22223216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:23854759-23855002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
237, 30
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:26097836-26097590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:26134457-26134195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 183
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:26339538-26339783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
174, 59
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:27291880-27292120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
238, 16
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:27825614-27825869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:29013655-29013910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:30515030-30515286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
234, 73
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:31196719-31196471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
201, 60
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:34476223-34475971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:34597708-34597963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
44, 153
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:36560883-36560629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 172
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr22:40374384-40374638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
192-449
               

               
Cow position:
               
chr22:226665-226423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
192-452
               

               
Cow position:
               
chr22:10585923-10585669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
192-452
               

               
Cow position:
               
chr22:41271213-41270967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
192-455
               

               
Cow position:
               
chr22:6123118-6122868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
192-458
               

               
Cow position:
               
chr22:25206192-25205932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
80, 153
               

               
Conread position:
               
192-464
               

               
Cow position:
               
chr22:22022664-22022937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 154
               

               
Conread position:
               
192-466
               

               
Cow position:
               
chr22:26490239-26490517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
192-466
               

               
Cow position:
               
chr22:30689409-30689689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
81, 155
               

               
Conread position:
               
192-467
               

               
Cow position:
               
chr22:23181258-23180995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
192-476
               

               
Cow position:
               
chr22:41045136-41044848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
192-484
               

               
Cow position:
               
chr22:30963909-30964202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
192-487
               

               
Cow position:
               
chr22:31593083-31592779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
192-494
               

               
Cow position:
               
chr22:43292123-43291818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
79, 187
               

               
Conread position:
               
192-499
               

               
Cow position:
               
chr22:22160498-22160815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 187
               

               
Conread position:
               
192-501
               

               
Cow position:
               
chr22:13011499-13011189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 127
               

               
Conread position:
               
192-511
               

               
Cow position:
               
chr22:12946387-12946081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
192-511
               

               
Cow position:
               
chr22:21355367-21355040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 183
               

               
Conread position:
               
192-511
               

               
Cow position:
               
chr22:36633010-36633324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
192-511
               

               
Cow position:
               
chr22:40720510-40720193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
192-512
               

               
Cow position:
               
chr22:27818781-27819102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
192-512
               

               
Cow position:
               
chr22:28146462-28146778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
192-513
               

               
Cow position:
               
chr22:7967475-7967805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
192-513
               

               
Cow position:
               
chr22:17152457-17152780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr22:845680-846007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr22:1289741-1289425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr22:1975390-1975712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
261, 75
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr22:4645555-4645875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 56
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr22:9977597-9977913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
259, 130
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr22:23115527-23115204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr22:25361268-25361588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 56
               

               
Conread position:
               
192-515
               

               
Cow position:
               
chr22:864740-864410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
192-517
               

               
Cow position:
               
chr22:22612890-22613212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 80
               

               
Conread position:
               
192-517
               

               
Cow position:
               
chr22:25629993-25629678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
40, 200
               

               
Conread position:
               
192-519
               

               
Cow position:
               
chr22:644983-644661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
102, 58
               

               
Conread position:
               
192-519
               

               
Cow position:
               
chr22:2148351-2148677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
80, 109
               

               
Conread position:
               
192-519
               

               
Cow position:
               
chr22:25943259-25943584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr22:1068138-1067804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
85, 185
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr22:7164732-7165073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr22:10161739-10162077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 145
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr22:13861366-13861686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr22:14366176-14365851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 124
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr22:15090518-15090852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 63
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr22:16532858-16533182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr22:27431905-27431595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
246, 57
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr22:28058265-28057940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 10
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr22:41982937-41982612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 75
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr22:59384-59721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
80, 94
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr22:10314855-10315188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 72
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr22:18196288-18196620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr22:21012168-21012495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
196, 66
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr22:25246687-25247023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr22:26141050-26141385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 187
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr22:33448297-33447970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr22:44180371-44180704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
103, 77
               

               
Conread position:
               
192-523
               

               
Cow position:
               
chr22:19775648-19775321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
257, 61
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr22:891362-891044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
82, 119
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr22:4563140-4563477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr22:10302788-10303130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
80, 204
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr22:22861134-22860798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
73, 186
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr22:26166837-26166510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
256, 51
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr22:32651285-32651605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr22:40121100-40120767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr22:3301546-3301224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr22:5616077-5616416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 191
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr22:8138480-8138149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
262, 82
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:10532272-10532616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 187
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:10685310-10684975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 73
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:14691198-14690855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 176
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:17950179-17949856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
256, 58
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:20626619-20626954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
175, 63
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:21890582-21890244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 143
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:23249935-23249612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
269, 73
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:27329106-27328777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:28665047-28665399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
72, 200
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:30483690-30484031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
56, 188
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:31646272-31646607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 80
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:36193639-36193949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
231, 47
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr22:42684678-42685007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:2502615-2502943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 75
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:6493948-6494278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:8324023-8324352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
81, 134
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:8481425-8481759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 63
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:10294828-10295152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 67
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:14179054-14178711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
53, 196
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:14371945-14372287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 186
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:15490437-15490771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
238, 69
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:15950599-15950269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:25743174-25742832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 156
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:27171480-27171147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:28356813-28357145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
82, 170
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:38980682-38981003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
265, 47
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:41971379-41971036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 51
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr22:43397795-43398117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 69
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:534271-534617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 189
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:1590798-1591143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:1986787-1987090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:2623737-2623404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 59
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:3325359-3325708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:3842405-3842735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
80, 98
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:3950019-3950370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 201
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:3960515-3960187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
80, 193
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:4017253-4017591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 69
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:4061165-4060829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 35
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:4076121-4075768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
80, 193
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:4119790-4119444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:4535549-4535212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
73, 180
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:6710000-6709676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
84, 108
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:8412302-8412647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 187
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:8446709-8447032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 187
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:8882803-8883129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 10
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:9127180-9127526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 195
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:10122166-10122497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 68
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:10323684-10323999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 56
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:11130649-11130988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:12572981-12573322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 237
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:12968292-12967952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:13957872-13957526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 109
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:15039407-15039065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:15568240-15567899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 115
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:16251789-16251455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
84, 181
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:16620951-16621299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
103, 74
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:17764155-17764498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:17852845-17852519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 71
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:18259006-18259336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
259, 56
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:18926129-18926474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 122
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:21295947-21295607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:21567777-21568110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:23176672-23176322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 169
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:26658833-26659161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:26786131-26786482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:28071332-28071676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 98
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:29641888-29642227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 51
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:29955221-29954889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:32661290-32661627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:32892473-32892812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:33485825-33485501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:34616087-34616424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
194, 51
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:34726450-34726783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:34750455-34750791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 152
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:34894750-34895082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:37201635-37201966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:38439380-38439038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 128
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:39508256-39507921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
265, 33
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:40048341-40048671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 69
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:40071747-40072095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:43119951-43119611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 55
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:43812640-43812321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 52
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:44717488-44717839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:44740881-44741193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
205, 72
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr22:45513743-45513411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
193-296
               

               
Cow position:
               
chr22:898535-898642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
193-376
               

               
Cow position:
               
chr22:45291112-45291297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 180
               

               
Conread position:
               
193-408
               

               
Cow position:
               
chr22:12974614-12974397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 178
               

               
Conread position:
               
193-428
               

               
Cow position:
               
chr22:2702007-2702241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 156
               

               
Conread position:
               
193-439
               

               
Cow position:
               
chr22:8877051-8877286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
79, 132
               

               
Conread position:
               
193-443
               

               
Cow position:
               
chr22:13849671-13849424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
193-446
               

               
Cow position:
               
chr22:16912015-16911766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
193-447
               

               
Cow position:
               
chr22:911881-912127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
203, 58
               

               
Conread position:
               
193-447
               

               
Cow position:
               
chr22:8732783-8732539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
193-447
               

               
Cow position:
               
chr22:15068204-15068456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
193-447
               

               
Cow position:
               
chr22:32326580-32326828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
193-514
               

               
Cow position:
               
chr22:7882329-7882656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 131
               

               
Conread position:
               
193-520
               

               
Cow position:
               
chr22:11370812-11370481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
79, 160
               

               
Conread position:
               
193-520
               

               
Cow position:
               
chr22:47555623-47555958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
193-521
               

               
Cow position:
               
chr22:23856827-23857157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
209, 152
               

               
Conread position:
               
193-521
               

               
Cow position:
               
chr22:26316252-26316567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
193-526
               

               
Cow position:
               
chr22:14245646-14245333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
197, 47
               

               
Conread position:
               
193-527
               

               
Cow position:
               
chr22:6215775-6215439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 33
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr22:3251211-3250877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr22:3964964-3965304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr22:29290358-29290025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
79, 132
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr22:40349129-40349462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
194-357
               

               
Cow position:
               
chr22:27700993-27701155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
194-373
               

               
Cow position:
               
chr22:5016288-5016470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 164
               

               
Conread position:
               
194-412
               

               
Cow position:
               
chr22:39472596-39472382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
194-414
               

               
Cow position:
               
chr22:38940169-38939953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
194-428
               

               
Cow position:
               
chr22:30712531-30712770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 204
               

               
Conread position:
               
194-435
               

               
Cow position:
               
chr22:1727659-1727891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
194-438
               

               
Cow position:
               
chr22:6202693-6202937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 122
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr22:1640529-1640271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 191
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr22:14844350-14844597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr22:26151340-26151083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
78, 123
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr22:34712494-34712755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr22:38930734-38930478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
194-477
               

               
Cow position:
               
chr22:36569762-36569492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 43
               

               
Conread position:
               
194-514
               

               
Cow position:
               
chr22:11613201-11613528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
194-515
               

               
Cow position:
               
chr22:30698959-30699283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
194-519
               

               
Cow position:
               
chr22:6149606-6149282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 147
               

               
Conread position:
               
194-521
               

               
Cow position:
               
chr22:1309948-1309623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
194-526
               

               
Cow position:
               
chr22:2216604-2216925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 78
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr22:7913257-7913579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr22:8733543-8733221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
258, 40
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr22:25237361-25237022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 56
               

               
Conread position:
               
195-335
               

               
Cow position:
               
chr22:17339982-17339844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
195-414
               

               
Cow position:
               
chr22:26106839-26107055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
195-421
               

               
Cow position:
               
chr22:10403715-10403498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 113
               

               
Conread position:
               
195-431
               

               
Cow position:
               
chr22:27480672-27480906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
70, 181
               

               
Conread position:
               
195-447
               

               
Cow position:
               
chr22:3987293-3987545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 185
               

               
Conread position:
               
195-447
               

               
Cow position:
               
chr22:15337895-15338144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 182
               

               
Conread position:
               
195-457
               

               
Cow position:
               
chr22:22146007-22146271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
53, 192
               

               
Conread position:
               
195-462
               

               
Cow position:
               
chr22:11686163-11685893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
74, 194
               

               
Conread position:
               
195-514
               

               
Cow position:
               
chr22:10937052-10936747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 141
               

               
Conread position:
               
195-523
               

               
Cow position:
               
chr22:26184380-26184048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 24
               

               
Conread position:
               
195-524
               

               
Cow position:
               
chr22:16044649-16044302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 308
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr22:6721286-6720962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
258, 71
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr22:17295150-17294819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 84
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr22:25222122-25221782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 308
               

               
Conread position:
               
196-368
               

               
Cow position:
               
chr22:16235869-16235696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
196-373
               

               
Cow position:
               
chr22:3944956-3945135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
196-447
               

               
Cow position:
               
chr22:14882328-14882083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
196-447
               

               
Cow position:
               
chr22:46610999-46610751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
98, 118
               

               
Conread position:
               
196-526
               

               
Cow position:
               
chr22:27581227-27581555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
196-527
               

               
Cow position:
               
chr22:28351874-28351552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
196-528
               

               
Cow position:
               
chr22:1326200-1326536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
196-528
               

               
Cow position:
               
chr22:17814010-17814350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
97, 52
               

               
Conread position:
               
197-427
               

               
Cow position:
               
chr22:5042103-5042323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
197-447
               

               
Cow position:
               
chr22:6622463-6622218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
100, 173
               

               
Conread position:
               
197-521
               

               
Cow position:
               
chr22:3316911-3317231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 48
               

               
Conread position:
               
197-527
               

               
Cow position:
               
chr22:24066451-24066116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 70
               

               
Conread position:
               
197-528
               

               
Cow position:
               
chr22:10339330-10339001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 76
               

               
Conread position:
               
198-519
               

               
Cow position:
               
chr22:30094029-30094348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
198-528
               

               
Cow position:
               
chr22:37324330-37324659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
255, 69
               

               
Conread position:
               
199-521
               

               
Cow position:
               
chr22:28640369-28640040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
72, 173
               

               
Conread position:
               
200-428
               

               
Cow position:
               
chr22:27512377-27512145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
202-524
               

               
Cow position:
               
chr22:34441847-34441515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
202-528
               

               
Cow position:
               
chr22:3533733-3534051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
202-528
               

               
Cow position:
               
chr22:18838038-18838373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 74
               

               
Conread position:
               
203-447
               

               
Cow position:
               
chr22:12800453-12800700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
205-528
               

               
Cow position:
               
chr22:21502530-21502862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 147
               

               
Conread position:
               
206-376
               

               
Cow position:
               
chr22:13017002-13016834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 119
               

               
Conread position:
               
207-365
               

               
Cow position:
               
chr22:30471895-30471740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
207-409
               

               
Cow position:
               
chr22:1081296-1081497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
207-438
               

               
Cow position:
               
chr22:41829437-41829220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
207-512
               

               
Cow position:
               
chr22:17125375-17125684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
207-526
               

               
Cow position:
               
chr22:9372308-9372637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
207-528
               

               
Cow position:
               
chr22:7302050-7301721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
207-528
               

               
Cow position:
               
chr22:10631165-10631506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 180
               

               
Conread position:
               
207-528
               

               
Cow position:
               
chr22:18219101-18218796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
208-365
               

               
Cow position:
               
chr22:44386607-44386456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
208-456
               

               
Cow position:
               
chr22:1601977-1602225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 163
               

               
Conread position:
               
209-363
               

               
Cow position:
               
chr22:44463326-44463482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
209-438
               

               
Cow position:
               
chr22:30710187-30710423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
209-446
               

               
Cow position:
               
chr22:5675377-5675152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
209-447
               

               
Cow position:
               
chr22:3366992-3367215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
209-447
               

               
Cow position:
               
chr22:3908713-3908959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 177
               

               
Conread position:
               
209-447
               

               
Cow position:
               
chr22:19653190-19652954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chr22:41245040-41245291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
209-519
               

               
Cow position:
               
chr22:46568094-46567785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
209-528
               

               
Cow position:
               
chr22:27322120-27322428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 50
               

               
Conread position:
               
210-357
               

               
Cow position:
               
chr22:11200833-11200978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
210-438
               

               
Cow position:
               
chr22:1279593-1279365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
210-447
               

               
Cow position:
               
chr22:27550151-27550386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
210-520
               

               
Cow position:
               
chr22:30998693-30998996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
211-440
               

               
Cow position:
               
chr22:4974623-4974401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
211-447
               

               
Cow position:
               
chr22:23689410-23689175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
211-511
               

               
Cow position:
               
chr22:3269682-3269387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
211-517
               

               
Cow position:
               
chr22:11458621-11458922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
61, 86
               

               
Conread position:
               
211-519
               

               
Cow position:
               
chr22:30269210-30269517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 54
               

               
Conread position:
               
211-528
               

               
Cow position:
               
chr22:41898652-41898332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
212-374
               

               
Cow position:
               
chr22:2945874-2945712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
212-447
               

               
Cow position:
               
chr22:10598195-10598414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
39, 53
               

               
Conread position:
               
212-519
               

               
Cow position:
               
chr22:43743532-43743237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
197, 60
               

               
Conread position:
               
212-524
               

               
Cow position:
               
chr22:27274895-27274586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
214-528
               

               
Cow position:
               
chr22:877311-877633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 171
               

               
Conread position:
               
215-428
               

               
Cow position:
               
chr22:16650402-16650189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 144
               

               
Conread position:
               
215-527
               

               
Cow position:
               
chr22:2523763-2524080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
216-527
               

               
Cow position:
               
chr22:10420833-10421150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
237, 45
               

               
Conread position:
               
216-528
               

               
Cow position:
               
chr22:14924927-14924614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
223, 24
               

               
Conread position:
               
217-521
               

               
Cow position:
               
chr22:12313222-12313535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 181
               

               
Conread position:
               
218-436
               

               
Cow position:
               
chr22:10678181-10677972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
218-514
               

               
Cow position:
               
chr22:4372845-4373146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 105
               

               
Conread position:
               
218-525
               

               
Cow position:
               
chr22:12315615-12315925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
219-387
               

               
Cow position:
               
chr22:7252843-7252670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
219-519
               

               
Cow position:
               
chr22:18021220-18020925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 87
               

               
Conread position:
               
219-520
               

               
Cow position:
               
chr22:15025299-15025000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
229, 27
               

               
Conread position:
               
219-528
               

               
Cow position:
               
chr22:1848869-1849192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
220-524
               

               
Cow position:
               
chr22:6327970-6327653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
46, 71
               

               
Conread position:
               
221-521
               

               
Cow position:
               
chr22:12803578-12803274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
221-524
               

               
Cow position:
               
chr22:2627377-2627694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 165
               

               
Conread position:
               
222-520
               

               
Cow position:
               
chr22:24734502-24734208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
201, 49
               

               
Conread position:
               
224-527
               

               
Cow position:
               
chr22:4583365-4583678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 288
               

               
Conread position:
               
225-468
               

               
Cow position:
               
chr22:39696099-39696337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
225-519
               

               
Cow position:
               
chr22:590146-590448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
226-528
               

               
Cow position:
               
chr22:36433158-36432855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 114
               

               
Conread position:
               
240-370
               

               
Cow position:
               
chr22:3541899-3541767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
240-446
               

               
Cow position:
               
chr22:15753192-15753412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
33, 152
               

               
Conread position:
               
240-449
               

               
Cow position:
               
chr22:33386682-33386473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
240-515
               

               
Cow position:
               
chr22:9283776-9283494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
240-520
               

               
Cow position:
               
chr22:4356915-4357199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
240-521
               

               
Cow position:
               
chr22:12388913-12389210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 145
               

               
Conread position:
               
240-521
               

               
Cow position:
               
chr22:16822929-16823201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
232, 25
               

               
Conread position:
               
242-404
               

               
Cow position:
               
chr22:26123503-26123338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
242-525
               

               
Cow position:
               
chr22:8090701-8090417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
243-447
               

               
Cow position:
               
chr22:32480654-32480451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
31, 114
               

               
Conread position:
               
243-520
               

               
Cow position:
               
chr22:45796168-45796454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
243-524
               

               
Cow position:
               
chr22:32698585-32698874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
243-526
               

               
Cow position:
               
chr22:6097198-6096901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
246-527
               

               
Cow position:
               
chr22:14638652-14638359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
249-520
               

               
Cow position:
               
chr22:20862927-20862646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
249-521
               

               
Cow position:
               
chr22:27729885-27730148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
204, 72
               

               
Conread position:
               
252-520
               

               
Cow position:
               
chr22:19047979-19047706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
197, 20
               

               
Conread position:
               
253-528
               

               
Cow position:
               
chr22:32895057-32895335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
140, 19
               

               
Conread position:
               
254-514
               

               
Cow position:
               
chr22:10292801-10293055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 135
               

               
Conread position:
               
254-524
               

               
Cow position:
               
chr22:24628814-24628544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
255-490
               

               
Cow position:
               
chr22:3241859-3241623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
255-528
               

               
Cow position:
               
chr22:19173536-19173820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
256-528
               

               
Cow position:
               
chr22:30818049-30818330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
257-528
               

               
Cow position:
               
chr22:40789411-40789683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
196, 83
               

               
Conread position:
               
261-464
               

               
Cow position:
               
chr22:1874536-1874737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
272-439
               

               
Cow position:
               
chr22:45019979-45019820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
272-527
               

               
Cow position:
               
chr22:25539848-25540116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
272-528
               

               
Cow position:
               
chr22:17224807-17224552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
185, 48
               

               
Conread position:
               
273-439
               

               
Cow position:
               
chr22:26506866-26506703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
273-484
               

               
Cow position:
               
chr22:27267398-27267607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 118
               

               
Conread position:
               
273-514
               

               
Cow position:
               
chr22:34735726-34735966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
184, 50
               

               
Conread position:
               
273-519
               

               
Cow position:
               
chr22:11767192-11766941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
273-521
               

               
Cow position:
               
chr22:45846004-45846252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
177, 95
               

               
Conread position:
               
273-524
               

               
Cow position:
               
chr22:1563392-1563139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
181, 71
               

               
Conread position:
               
273-528
               

               
Cow position:
               
chr22:2912724-2912472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
273-528
               

               
Cow position:
               
chr22:22553377-22553143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
274-438
               

               
Cow position:
               
chr22:27835389-27835555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
274-447
               

               
Cow position:
               
chr22:34631996-34632164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
274-517
               

               
Cow position:
               
chr22:45807699-45807940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
177, 102
               

               
Conread position:
               
274-521
               

               
Cow position:
               
chr22:3315970-3316206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
170, 73
               

               
Conread position:
               
274-526
               

               
Cow position:
               
chr22:31153815-31154071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
165, 69
               

               
Conread position:
               
275-520
               

               
Cow position:
               
chr22:21393459-21393216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
182, 109
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr22:15668614-15668358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 196
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr22:16095041-16094787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
171, 55
               

               
Conread position:
               
276-526
               

               
Cow position:
               
chr22:27066253-27066494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
108, 100
               

               
Conread position:
               
277-524
               

               
Cow position:
               
chr22:31510506-31510264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
176, 88
               

               
Conread position:
               
279-526
               

               
Cow position:
               
chr22:31599314-31599547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
281-527
               

               
Cow position:
               
chr22:25387190-25387445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 49
               

               
Conread position:
               
287-524
               

               
Cow position:
               
chr22:616993-617235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 99
               

               
Conread position:
               
289-528
               

               
Cow position:
               
chr22:9597706-9597462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
137, 87
               

               
Conread position:
               
293-519
               

               
Cow position:
               
chr22:12527247-12527013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
65, 110
               

               
Conread position:
               
293-528
               

               
Cow position:
               
chr22:10609232-10609474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
101, 200
               

               
Conread position:
               
294-507
               

               
Cow position:
               
chr22:4011063-4011281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
153, 75
               

               
Conread position:
               
294-526
               

               
Cow position:
               
chr22:43237528-43237292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
163, 82
               

               
Conread position:
               
295-526
               

               
Cow position:
               
chr22:6936145-6936372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
162, 32
               

               
Conread position:
               
298-524
               

               
Cow position:
               
chr22:13094281-13094506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
300-525
               

               
Cow position:
               
chr22:15020511-15020298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
305-520
               

               
Cow position:
               
chr22:1870991-1871208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
305-524
               

               
Cow position:
               
chr22:37947613-37947837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
152, 71
               

               
Conread position:
               
305-528
               

               
Cow position:
               
chr22:38320788-38320578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
183, 64
               

               
Conread position:
               
306-524
               

               
Cow position:
               
chr22:1983743-1983962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
137, 80
               

               
Conread position:
               
306-525
               

               
Cow position:
               
chr22:12341086-12341311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
143, 79
               

               
Conread position:
               
307-528
               

               
Cow position:
               
chr22:285467-285248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
150, 51
               

               
Conread position:
               
309-522
               

               
Cow position:
               
chr22:13222006-13222229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
314-528
               

               
Cow position:
               
chr22:34104776-34104554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
316-515
               

               
Cow position:
               
chr22:10669573-10669369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
321-528
               

               
Cow position:
               
chr22:24903495-24903710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
132, 62
               

               
Conread position:
               
322-524
               

               
Cow position:
               
chr22:4315535-4315743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
323-437
               

               
Cow position:
               
chr22:44262995-44263108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
324-528
               

               
Cow position:
               
chr22:17652342-17652553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
133, 52
               

               
Conread position:
               
325-525
               

               
Cow position:
               
chr22:1659072-1659278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
327-528
               

               
Cow position:
               
chr22:26122809-26123016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
127, 49
               

               
Conread position:
               
329-528
               

               
Cow position:
               
chr22:12678506-12678304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
330-528
               

               
Cow position:
               
chr22:10553770-10553567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
120, 53
               

               
Conread position:
               
330-528
               

               
Cow position:
               
chr22:14214448-14214248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
331-520
               

               
Cow position:
               
chr22:26056954-26056755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
332-520
               

               
Cow position:
               
chr22:1977663-1977859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
333-527
               

               
Cow position:
               
chr22:42617918-42618116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
335-526
               

               
Cow position:
               
chr22:9171325-9171524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
347-527
               

               
Cow position:
               
chr22:21526851-21527029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
117, 38
               

               
Conread position:
               
347-528
               

               
Cow position:
               
chr22:2101015-2100828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
347-528
               

               
Cow position:
               
chr22:6176358-6176168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
352-527
               

               
Cow position:
               
chr22:21235497-21235315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 137
               

               
Conread position:
               
370-524
               

               
Cow position:
               
chr22:12902895-12902741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
387-528
               

               
Cow position:
               
chr22:33985831-33985685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
388-528
               

               
Cow position:
               
chr22:24063060-24063210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
391-528
               

               
Cow position:
               
chr22:24134350-24134208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
392-528
               

               
Cow position:
               
chr22:4163953-4164096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               
Show alignments to all cow chromosomes.