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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_010910.5
        

               
Conread position:
               
151-429
               

               
Cow position:
               
chr23:20996213-20996481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 95
               

               
Conread position:
               
181-381
               

               
Cow position:
               
chr23:1489828-1490022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
181-527
               

               
Cow position:
               
chr23:21764688-21765042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 204
               

               
Conread position:
               
185-429
               

               
Cow position:
               
chr23:4942330-4942094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
188-519
               

               
Cow position:
               
chr23:9711809-9711470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
189-373
               

               
Cow position:
               
chr23:5617356-5617541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
189-418
               

               
Cow position:
               
chr23:19538214-19537988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 112
               

               
Conread position:
               
189-438
               

               
Cow position:
               
chr23:4608602-4608356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 93
               

               
Conread position:
               
189-438
               

               
Cow position:
               
chr23:7221234-7220987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
75, 162
               

               
Conread position:
               
189-438
               

               
Cow position:
               
chr23:31607379-31607124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr23:20171355-20171614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr23:21788991-21788732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 167
               

               
Conread position:
               
189-458
               

               
Cow position:
               
chr23:20781604-20781866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
183, 129
               

               
Conread position:
               
189-504
               

               
Cow position:
               
chr23:16237480-16237157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 188
               

               
Conread position:
               
189-505
               

               
Cow position:
               
chr23:20752792-20753107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
134, 219
               

               
Conread position:
               
189-505
               

               
Cow position:
               
chr23:41590131-41589822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
262, 151
               

               
Conread position:
               
189-524
               

               
Cow position:
               
chr23:5389482-5389818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
189-524
               

               
Cow position:
               
chr23:30307688-30308027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
190-507
               

               
Cow position:
               
chr23:19636483-19636160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
190-520
               

               
Cow position:
               
chr23:37224285-37223958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
191-374
               

               
Cow position:
               
chr23:14189778-14189592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
191-380
               

               
Cow position:
               
chr23:3715547-3715739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
191-380
               

               
Cow position:
               
chr23:16610028-16609836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 64
               

               
Conread position:
               
191-394
               

               
Cow position:
               
chr23:25408617-25408816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
191-415
               

               
Cow position:
               
chr23:10415244-10415021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 85
               

               
Conread position:
               
191-425
               

               
Cow position:
               
chr23:38854952-38854722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
191-451
               

               
Cow position:
               
chr23:416942-417186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
191-478
               

               
Cow position:
               
chr23:22588488-22588197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
191-519
               

               
Cow position:
               
chr23:40781108-40781444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
191, 76
               

               
Conread position:
               
191-520
               

               
Cow position:
               
chr23:40891143-40891478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
258, 83
               

               
Conread position:
               
191-526
               

               
Cow position:
               
chr23:29345978-29345648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
78, 144
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr23:1398256-1397915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr23:5603489-5603162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
176, 57
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr23:14838954-14838621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
247, 60
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr23:20435269-20434940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
228, 81
               

               
Conread position:
               
192-327
               

               
Cow position:
               
chr23:1664471-1664608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
192-329
               

               
Cow position:
               
chr23:29742168-29742303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 107
               

               
Conread position:
               
192-339
               

               
Cow position:
               
chr23:1610635-1610784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
192-339
               

               
Cow position:
               
chr23:14896021-14895871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
192-342
               

               
Cow position:
               
chr23:28118320-28118167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
192-343
               

               
Cow position:
               
chr23:5395642-5395487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 118
               

               
Conread position:
               
192-349
               

               
Cow position:
               
chr23:38414175-38414023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
192-352
               

               
Cow position:
               
chr23:5151771-5151923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
192-354
               

               
Cow position:
               
chr23:7596548-7596387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
192-357
               

               
Cow position:
               
chr23:221853-222016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
192-358
               

               
Cow position:
               
chr23:41348866-41348696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr23:361127-360952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr23:39793237-39793415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
175, 22
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr23:25189124-25189309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr23:26319200-26319382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
80, 126
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr23:35254455-35254274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr23:36199076-36199256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
175, 101
               

               
Conread position:
               
192-380
               

               
Cow position:
               
chr23:21343467-21343280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
192-388
               

               
Cow position:
               
chr23:3727619-3727420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
79, 182
               

               
Conread position:
               
192-394
               

               
Cow position:
               
chr23:12290065-12290270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
192-397
               

               
Cow position:
               
chr23:1991644-1991442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
106, 55
               

               
Conread position:
               
192-402
               

               
Cow position:
               
chr23:1430012-1429809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
192-404
               

               
Cow position:
               
chr23:587178-587392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
80, 203
               

               
Conread position:
               
192-412
               

               
Cow position:
               
chr23:2259817-2259592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-413
               

               
Cow position:
               
chr23:10868544-10868764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
170, 65
               

               
Conread position:
               
192-414
               

               
Cow position:
               
chr23:406378-406170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
192-419
               

               
Cow position:
               
chr23:32961586-32961356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr23:808949-809180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr23:18367478-18367716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 66
               

               
Conread position:
               
192-432
               

               
Cow position:
               
chr23:36076038-36075797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr23:1068530-1068295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
92, 73
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr23:27862114-27862350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr23:40862122-40862367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
81, 219
               

               
Conread position:
               
192-434
               

               
Cow position:
               
chr23:36129119-36128887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
192-436
               

               
Cow position:
               
chr23:3208836-3208595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr23:1647411-1647644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr23:2055485-2055730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr23:8006023-8006269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr23:8293284-8293527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
80, 97
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr23:21659720-21659971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 198
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr23:40778045-40778291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
77, 194
               

               
Conread position:
               
192-439
               

               
Cow position:
               
chr23:10852835-10853081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
192-441
               

               
Cow position:
               
chr23:4338824-4338582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
80, 143
               

               
Conread position:
               
192-445
               

               
Cow position:
               
chr23:7402489-7402734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
192-446
               

               
Cow position:
               
chr23:4980761-4980512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:1605006-1605263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 142
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:3918315-3918062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
98, 80
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:4579252-4579004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:6720494-6720246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:8959379-8959630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 117
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:10416640-10416386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 56
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:12050148-12050391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
104, 66
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:16664767-16664535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:18698242-18697991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 60
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:18802490-18802235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
114, 63
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:26849118-26848865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:27996916-27997163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 130
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:29521252-29521507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
73, 117
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:31601675-31601416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 184
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:33695992-33695737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 126
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:40502730-40502481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr23:40526189-40525948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
192-448
               

               
Cow position:
               
chr23:19979164-19978916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
192-452
               

               
Cow position:
               
chr23:670403-670659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 123
               

               
Conread position:
               
192-457
               

               
Cow position:
               
chr23:11380475-11380210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 189
               

               
Conread position:
               
192-466
               

               
Cow position:
               
chr23:11080864-11081131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
192-467
               

               
Cow position:
               
chr23:1803573-1803840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
192-479
               

               
Cow position:
               
chr23:29471336-29471065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
192-487
               

               
Cow position:
               
chr23:25378438-25378729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
109, 24
               

               
Conread position:
               
192-495
               

               
Cow position:
               
chr23:39806655-39806960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 55
               

               
Conread position:
               
192-502
               

               
Cow position:
               
chr23:4562666-4562983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
192-506
               

               
Cow position:
               
chr23:3262716-3262396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
192-511
               

               
Cow position:
               
chr23:11845071-11845382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr23:16881374-16881053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 27
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr23:24509485-24509794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 8
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr23:1690571-1690889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
79, 161
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr23:6244804-6244481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr23:6592911-6592593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr23:9268372-9268695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 170
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr23:9874454-9874769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
103, 77
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr23:19002286-19001954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr23:29242729-29243052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
80, 162
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr23:29626197-29626538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr23:1885393-1885056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
80, 187
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr23:16583126-16582793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
256, 177
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr23:27563926-27563589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
192-523
               

               
Cow position:
               
chr23:27544615-27544947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 63
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr23:1878088-1877776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr23:4504610-4504932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 134
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr23:11315234-11314914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
259, 48
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr23:20558076-20557725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
75, 193
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr23:39775513-39775845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
229, 69
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr23:39778196-39778521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
261, 35
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr23:5162215-5162550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr23:8063337-8063664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr23:26632582-26632925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 194
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr23:1254460-1254809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr23:6223783-6224095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
175, 58
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr23:13599124-13599462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 183
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr23:17404633-17404960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
260, 52
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr23:22298234-22297917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr23:38455402-38455056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr23:1536110-1536444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
109, 48
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr23:11045267-11045608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 50
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr23:14164617-14164272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr23:16700256-16699919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr23:20195135-20194802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
103, 230
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr23:26986491-26986149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 42
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr23:38208493-38208849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
81, 64
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:186954-187302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
41, 185
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:344395-344065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
81, 195
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:534012-534351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 75
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:1290077-1290421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:1883176-1883520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:2502066-2501730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 56
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:4529109-4528756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:6367388-6367728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 113
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:6767673-6768030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:6995191-6994859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
258, 70
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:7845072-7845420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 186
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:9734197-9734532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
105, 73
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:10554229-10553885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 178
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:11129017-11129356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:13511516-13511849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 32
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:15287351-15287016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
81, 150
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:20744806-20744471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 74
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:21336706-21336361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:22530635-22530315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
81, 165
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:22804506-22804848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:24704062-24704415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:30662845-30662516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
83, 91
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:31493661-31493991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
181, 48
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:33601741-33601415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:33717761-33717419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 195
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:37065620-37065973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr23:39752897-39753237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 155
               

               
Conread position:
               
193-372
               

               
Cow position:
               
chr23:1640595-1640774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 140
               

               
Conread position:
               
193-431
               

               
Cow position:
               
chr23:14191333-14191573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
79, 182
               

               
Conread position:
               
193-438
               

               
Cow position:
               
chr23:9595044-9594807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
193-446
               

               
Cow position:
               
chr23:479311-479564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 183
               

               
Conread position:
               
193-449
               

               
Cow position:
               
chr23:3247372-3247623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
193-512
               

               
Cow position:
               
chr23:353794-353498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
193-527
               

               
Cow position:
               
chr23:1905812-1906165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 202
               

               
Conread position:
               
193-527
               

               
Cow position:
               
chr23:1924052-1923715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 72
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr23:4968736-4968406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr23:8698227-8698544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 123
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr23:18402502-18402167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
194-357
               

               
Cow position:
               
chr23:3140649-3140811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 107
               

               
Conread position:
               
194-358
               

               
Cow position:
               
chr23:5870398-5870231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
194-414
               

               
Cow position:
               
chr23:37992774-37992983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr23:615126-614866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
194-511
               

               
Cow position:
               
chr23:25669285-25668985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
229, 59
               

               
Conread position:
               
194-520
               

               
Cow position:
               
chr23:6172877-6172562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
194-520
               

               
Cow position:
               
chr23:14739233-14739564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
167, 104
               

               
Conread position:
               
194-520
               

               
Cow position:
               
chr23:15056857-15056535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 71
               

               
Conread position:
               
194-524
               

               
Cow position:
               
chr23:5706785-5707113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
194-524
               

               
Cow position:
               
chr23:15742884-15743209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
257, 40
               

               
Conread position:
               
194-524
               

               
Cow position:
               
chr23:29459304-29458979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 76
               

               
Conread position:
               
194-526
               

               
Cow position:
               
chr23:5723328-5723656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr23:9599287-9599617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
201, 51
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr23:24867087-24867433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr23:25864899-25864575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
232, 46
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr23:29034098-29034438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 185
               

               
Conread position:
               
195-337
               

               
Cow position:
               
chr23:29824280-29824135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
195-421
               

               
Cow position:
               
chr23:32105658-32105879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
195-431
               

               
Cow position:
               
chr23:7835713-7835472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
195-438
               

               
Cow position:
               
chr23:1009616-1009375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
101, 181
               

               
Conread position:
               
195-520
               

               
Cow position:
               
chr23:1721198-1720867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
195-520
               

               
Cow position:
               
chr23:2457248-2457558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
77, 145
               

               
Conread position:
               
195-526
               

               
Cow position:
               
chr23:13555642-13555317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
199, 49
               

               
Conread position:
               
195-526
               

               
Cow position:
               
chr23:21452947-21452608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr23:3967764-3967436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
80, 42
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr23:18902265-18901931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 180
               

               
Conread position:
               
196-374
               

               
Cow position:
               
chr23:4523192-4523014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
63, 147
               

               
Conread position:
               
196-457
               

               
Cow position:
               
chr23:3955208-3955462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
196-494
               

               
Cow position:
               
chr23:18322633-18322337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
76, 181
               

               
Conread position:
               
196-521
               

               
Cow position:
               
chr23:26795117-26794801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 76
               

               
Conread position:
               
196-522
               

               
Cow position:
               
chr23:11473720-11473386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 50
               

               
Conread position:
               
196-524
               

               
Cow position:
               
chr23:2799353-2799699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 171
               

               
Conread position:
               
196-526
               

               
Cow position:
               
chr23:20057080-20056759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 197
               

               
Conread position:
               
196-528
               

               
Cow position:
               
chr23:40648941-40648607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
197-447
               

               
Cow position:
               
chr23:1337517-1337269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
75, 183
               

               
Conread position:
               
197-526
               

               
Cow position:
               
chr23:36309213-36309544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
229, 51
               

               
Conread position:
               
197-528
               

               
Cow position:
               
chr23:18296595-18296931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
197-528
               

               
Cow position:
               
chr23:40789773-40790096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
227, 72
               

               
Conread position:
               
198-511
               

               
Cow position:
               
chr23:22399190-22399512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
75, 145
               

               
Conread position:
               
199-527
               

               
Cow position:
               
chr23:1742147-1742476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
199-528
               

               
Cow position:
               
chr23:23409536-23409857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
202-432
               

               
Cow position:
               
chr23:22674646-22674416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
202-435
               

               
Cow position:
               
chr23:41285720-41285942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
202-519
               

               
Cow position:
               
chr23:1776838-1776528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 43
               

               
Conread position:
               
202-528
               

               
Cow position:
               
chr23:1700703-1701014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 101
               

               
Conread position:
               
204-447
               

               
Cow position:
               
chr23:36017937-36018185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 178
               

               
Conread position:
               
206-438
               

               
Cow position:
               
chr23:792235-792004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
207-413
               

               
Cow position:
               
chr23:29786555-29786339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
207-447
               

               
Cow position:
               
chr23:3191326-3191090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
207-447
               

               
Cow position:
               
chr23:16631062-16631304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 111
               

               
Conread position:
               
207-447
               

               
Cow position:
               
chr23:30585864-30585616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
207-447
               

               
Cow position:
               
chr23:33711564-33711795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
207-451
               

               
Cow position:
               
chr23:20248902-20248656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
65, 173
               

               
Conread position:
               
207-528
               

               
Cow position:
               
chr23:4646311-4646634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
66, 119
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr23:14417887-14417679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 162
               

               
Conread position:
               
208-429
               

               
Cow position:
               
chr23:39028583-39028797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
208-447
               

               
Cow position:
               
chr23:16563641-16563873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
208-447
               

               
Cow position:
               
chr23:39309316-39309075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
208-526
               

               
Cow position:
               
chr23:30773881-30773567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 163
               

               
Conread position:
               
209-357
               

               
Cow position:
               
chr23:20259377-20259225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
209-357
               

               
Cow position:
               
chr23:20443498-20443346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
209-429
               

               
Cow position:
               
chr23:1394279-1394060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 161
               

               
Conread position:
               
209-446
               

               
Cow position:
               
chr23:24930273-24930038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
66, 99
               

               
Conread position:
               
209-447
               

               
Cow position:
               
chr23:40443665-40443895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 119
               

               
Conread position:
               
209-509
               

               
Cow position:
               
chr23:33940355-33940052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
252, 89
               

               
Conread position:
               
209-528
               

               
Cow position:
               
chr23:1428616-1428933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
234, 39
               

               
Conread position:
               
210-429
               

               
Cow position:
               
chr23:1189101-1188889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
55, 111
               

               
Conread position:
               
211-358
               

               
Cow position:
               
chr23:27029729-27029879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
211-494
               

               
Cow position:
               
chr23:30999377-30999654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
62, 164
               

               
Conread position:
               
211-524
               

               
Cow position:
               
chr23:5451123-5451437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
55, 178
               

               
Conread position:
               
212-428
               

               
Cow position:
               
chr23:11626674-11626466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
156, 51
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chr23:1942524-1942744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 171
               

               
Conread position:
               
212-438
               

               
Cow position:
               
chr23:38973649-38973876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
212-528
               

               
Cow position:
               
chr23:2282375-2282059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
212-528
               

               
Cow position:
               
chr23:21445920-21446240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
213-447
               

               
Cow position:
               
chr23:16847766-16848004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
58, 149
               

               
Conread position:
               
213-508
               

               
Cow position:
               
chr23:5426231-5426537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
213-520
               

               
Cow position:
               
chr23:4726591-4726907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
213-528
               

               
Cow position:
               
chr23:1585585-1585274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
214-447
               

               
Cow position:
               
chr23:8923408-8923637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
215-446
               

               
Cow position:
               
chr23:22496761-22496526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
215-447
               

               
Cow position:
               
chr23:25675887-25675665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
215-494
               

               
Cow position:
               
chr23:19371265-19370985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
215-526
               

               
Cow position:
               
chr23:25358545-25358834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
268, 31
               

               
Conread position:
               
216-511
               

               
Cow position:
               
chr23:10014342-10014633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
59, 163
               

               
Conread position:
               
219-447
               

               
Cow position:
               
chr23:15872891-15872659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 152
               

               
Conread position:
               
219-447
               

               
Cow position:
               
chr23:33569945-33570169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
219-528
               

               
Cow position:
               
chr23:34356443-34356764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
54, 174
               

               
Conread position:
               
220-447
               

               
Cow position:
               
chr23:40844460-40844685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
220-521
               

               
Cow position:
               
chr23:5539981-5540264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
233, 25
               

               
Conread position:
               
221-525
               

               
Cow position:
               
chr23:3394685-3394375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 110
               

               
Conread position:
               
221-528
               

               
Cow position:
               
chr23:2488173-2487867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
52, 86
               

               
Conread position:
               
231-526
               

               
Cow position:
               
chr23:22414491-22414186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
235-528
               

               
Cow position:
               
chr23:7360939-7361231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
238-421
               

               
Cow position:
               
chr23:18107520-18107335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 147
               

               
Conread position:
               
238-528
               

               
Cow position:
               
chr23:1636102-1636391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
13, 144
               

               
Conread position:
               
239-528
               

               
Cow position:
               
chr23:4104231-4104519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
240-526
               

               
Cow position:
               
chr23:4996267-4995975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
240-528
               

               
Cow position:
               
chr23:3282289-3281997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 102
               

               
Conread position:
               
240-528
               

               
Cow position:
               
chr23:12334037-12334333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
241-526
               

               
Cow position:
               
chr23:1583359-1583646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
243-518
               

               
Cow position:
               
chr23:16744377-16744660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 130
               

               
Conread position:
               
244-444
               

               
Cow position:
               
chr23:1921390-1921195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
244-521
               

               
Cow position:
               
chr23:1767661-1767947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
245-521
               

               
Cow position:
               
chr23:18416216-18415939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
248-447
               

               
Cow position:
               
chr23:12091524-12091326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
253-447
               

               
Cow position:
               
chr23:33622312-33622115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
255-438
               

               
Cow position:
               
chr23:23113871-23114058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 123
               

               
Conread position:
               
255-447
               

               
Cow position:
               
chr23:4329839-4329640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
255-524
               

               
Cow position:
               
chr23:16072478-16072225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
255-528
               

               
Cow position:
               
chr23:13945871-13946161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
257-438
               

               
Cow position:
               
chr23:26942284-26942468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
257-514
               

               
Cow position:
               
chr23:35938191-35938455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
263-524
               

               
Cow position:
               
chr23:12363763-12363498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 9
               

               
Conread position:
               
269-445
               

               
Cow position:
               
chr23:1634545-1634715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
273-520
               

               
Cow position:
               
chr23:26050899-26051154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 112
               

               
Conread position:
               
273-521
               

               
Cow position:
               
chr23:3409041-3408788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
180, 50
               

               
Conread position:
               
273-528
               

               
Cow position:
               
chr23:4966683-4966942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
274-526
               

               
Cow position:
               
chr23:32480172-32479896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
274-528
               

               
Cow position:
               
chr23:21502773-21502507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 59
               

               
Conread position:
               
274-528
               

               
Cow position:
               
chr23:30950824-30951081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
175, 45
               

               
Conread position:
               
275-435
               

               
Cow position:
               
chr23:33153324-33153170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
276-423
               

               
Cow position:
               
chr23:24809799-24809652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-528
               

               
Cow position:
               
chr23:5732417-5732673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 116
               

               
Conread position:
               
278-524
               

               
Cow position:
               
chr23:3434042-3433793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
175, 81
               

               
Conread position:
               
280-526
               

               
Cow position:
               
chr23:18286068-18286314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
169, 42
               

               
Conread position:
               
281-447
               

               
Cow position:
               
chr23:2801813-2801648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
281-514
               

               
Cow position:
               
chr23:4908383-4908610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
176, 74
               

               
Conread position:
               
282-528
               

               
Cow position:
               
chr23:16076287-16076041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
151, 33
               

               
Conread position:
               
284-527
               

               
Cow position:
               
chr23:5795352-5795600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
154, 92
               

               
Conread position:
               
286-514
               

               
Cow position:
               
chr23:1438173-1438402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
118, 31
               

               
Conread position:
               
288-528
               

               
Cow position:
               
chr23:6148179-6147914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
72, 255
               

               
Conread position:
               
288-528
               

               
Cow position:
               
chr23:40334269-40334042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
290-524
               

               
Cow position:
               
chr23:1701051-1701291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
157, 86
               

               
Conread position:
               
292-528
               

               
Cow position:
               
chr23:33628810-33629053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
300-521
               

               
Cow position:
               
chr23:1876601-1876828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
152, 76
               

               
Conread position:
               
300-528
               

               
Cow position:
               
chr23:5436750-5436519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
300-528
               

               
Cow position:
               
chr23:39275780-39276020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
151, 56
               

               
Conread position:
               
300-528
               

               
Cow position:
               
chr23:39780647-39780878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
149, 15
               

               
Conread position:
               
302-520
               

               
Cow position:
               
chr23:24685144-24685359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
151, 69
               

               
Conread position:
               
304-526
               

               
Cow position:
               
chr23:1697570-1697795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
305-528
               

               
Cow position:
               
chr23:11212401-11212631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
90, 73
               

               
Conread position:
               
306-514
               

               
Cow position:
               
chr23:385414-385202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
55, 5
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr23:20539280-20539509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
147, 26
               

               
Conread position:
               
307-521
               

               
Cow position:
               
chr23:1222342-1222120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
307-528
               

               
Cow position:
               
chr23:10497606-10497821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
147, 47
               

               
Conread position:
               
311-516
               

               
Cow position:
               
chr23:1403903-1403694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 65
               

               
Conread position:
               
315-514
               

               
Cow position:
               
chr23:4795078-4795279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 76
               

               
Conread position:
               
322-447
               

               
Cow position:
               
chr23:23104807-23104682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
322-528
               

               
Cow position:
               
chr23:8917762-8917555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
323-528
               

               
Cow position:
               
chr23:3293605-3293818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
323-528
               

               
Cow position:
               
chr23:20002168-20002377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
132, 204
               

               
Conread position:
               
323-528
               

               
Cow position:
               
chr23:24926725-24926938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
324-527
               

               
Cow position:
               
chr23:17486912-17486701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
81, 52
               

               
Conread position:
               
326-512
               

               
Cow position:
               
chr23:5237512-5237312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
326-527
               

               
Cow position:
               
chr23:19872758-19872560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
128, 52
               

               
Conread position:
               
327-528
               

               
Cow position:
               
chr23:21440084-21439877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
328-507
               

               
Cow position:
               
chr23:4470582-4470397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
329-520
               

               
Cow position:
               
chr23:24966545-24966347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
122, 56
               

               
Conread position:
               
330-509
               

               
Cow position:
               
chr23:19769508-19769689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
331-527
               

               
Cow position:
               
chr23:3430990-3431190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 105
               

               
Conread position:
               
333-528
               

               
Cow position:
               
chr23:5881595-5881394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
118, 45
               

               
Conread position:
               
336-528
               

               
Cow position:
               
chr23:1863398-1863593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
337-447
               

               
Cow position:
               
chr23:18749138-18749029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
338-524
               

               
Cow position:
               
chr23:40637184-40637376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
341-520
               

               
Cow position:
               
chr23:35965074-35965262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
341-524
               

               
Cow position:
               
chr23:3830269-3830081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
110, 35
               

               
Conread position:
               
341-528
               

               
Cow position:
               
chr23:16961227-16961421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
342-528
               

               
Cow position:
               
chr23:349018-348824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
344-528
               

               
Cow position:
               
chr23:40995106-40995294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
345-524
               

               
Cow position:
               
chr23:40275609-40275428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
345-528
               

               
Cow position:
               
chr23:1981719-1981539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
345-528
               

               
Cow position:
               
chr23:18822927-18823113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
345-528
               

               
Cow position:
               
chr23:22105496-22105684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
347-514
               

               
Cow position:
               
chr23:5400603-5400771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
347-525
               

               
Cow position:
               
chr23:1589523-1589710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
347-527
               

               
Cow position:
               
chr23:13202424-13202236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
351-528
               

               
Cow position:
               
chr23:3137266-3137431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
360-519
               

               
Cow position:
               
chr23:2160685-2160525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
382-526
               

               
Cow position:
               
chr23:18605437-18605285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
387-527
               

               
Cow position:
               
chr23:1760871-1760720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
394-524
               

               
Cow position:
               
chr23:4090409-4090534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               
Show alignments to all cow chromosomes.