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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_010910.5
        

               
Conread position:
               
148-528
               

               
Cow position:
               
chr3:27940418-27940046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
169-438
               

               
Cow position:
               
chr3:83201793-83201526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
101, 188
               

               
Conread position:
               
186-447
               

               
Cow position:
               
chr3:6689746-6690008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 190
               

               
Conread position:
               
188-348
               

               
Cow position:
               
chr3:77276651-77276494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 55
               

               
Conread position:
               
188-369
               

               
Cow position:
               
chr3:17284591-17284779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
188-374
               

               
Cow position:
               
chr3:51604853-51604665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
87, 150
               

               
Conread position:
               
188-421
               

               
Cow position:
               
chr3:49119277-49119044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 192
               

               
Conread position:
               
188-526
               

               
Cow position:
               
chr3:53538278-53538607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 113
               

               
Conread position:
               
189-352
               

               
Cow position:
               
chr3:19717332-19717175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
189-353
               

               
Cow position:
               
chr3:74699640-74699473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
189-359
               

               
Cow position:
               
chr3:52147925-52147746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
84, 132
               

               
Conread position:
               
189-365
               

               
Cow position:
               
chr3:22170945-22171117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 61
               

               
Conread position:
               
189-365
               

               
Cow position:
               
chr3:34316209-34316028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
189-365
               

               
Cow position:
               
chr3:82473810-82473988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 133
               

               
Conread position:
               
189-371
               

               
Cow position:
               
chr3:70130057-70129875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
189-380
               

               
Cow position:
               
chr3:48433700-48433895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
189-422
               

               
Cow position:
               
chr3:72168966-72168734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
86, 190
               

               
Conread position:
               
189-431
               

               
Cow position:
               
chr3:15387966-15388205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 152
               

               
Conread position:
               
189-432
               

               
Cow position:
               
chr3:59366302-59366548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
69, 208
               

               
Conread position:
               
189-436
               

               
Cow position:
               
chr3:15655397-15655149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
75, 165
               

               
Conread position:
               
189-438
               

               
Cow position:
               
chr3:23092228-23091976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 220
               

               
Conread position:
               
189-438
               

               
Cow position:
               
chr3:31907391-31907140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 120
               

               
Conread position:
               
189-438
               

               
Cow position:
               
chr3:48629830-48629590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
134, 77
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr3:12255235-12255489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr3:36100583-36100846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
84, 186
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr3:42584297-42584551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 121
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr3:53588635-53588375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr3:69417033-69416773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 199
               

               
Conread position:
               
189-447
               

               
Cow position:
               
chr3:72473662-72473923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 191
               

               
Conread position:
               
189-457
               

               
Cow position:
               
chr3:56704099-56703833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
189-466
               

               
Cow position:
               
chr3:54881511-54881795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
189-504
               

               
Cow position:
               
chr3:62883958-62884276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
189-514
               

               
Cow position:
               
chr3:51146911-51146588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
189-515
               

               
Cow position:
               
chr3:54862667-54862335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
189-519
               

               
Cow position:
               
chr3:48241376-48241702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
257, 64
               

               
Conread position:
               
189-520
               

               
Cow position:
               
chr3:24852832-24852510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 112
               

               
Conread position:
               
189-520
               

               
Cow position:
               
chr3:41718143-41718480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
121, 77
               

               
Conread position:
               
189-522
               

               
Cow position:
               
chr3:23111750-23111421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 114
               

               
Conread position:
               
189-522
               

               
Cow position:
               
chr3:74611317-74611654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 153
               

               
Conread position:
               
189-523
               

               
Cow position:
               
chr3:8457411-8457746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
189-523
               

               
Cow position:
               
chr3:50614394-50614733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
178, 78
               

               
Conread position:
               
189-524
               

               
Cow position:
               
chr3:51255539-51255873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 212
               

               
Conread position:
               
189-528
               

               
Cow position:
               
chr3:12712168-12711818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 191
               

               
Conread position:
               
189-528
               

               
Cow position:
               
chr3:39171729-39171391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
234, 187
               

               
Conread position:
               
189-528
               

               
Cow position:
               
chr3:54340659-54340325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 133
               

               
Conread position:
               
190-354
               

               
Cow position:
               
chr3:26493470-26493302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
190-389
               

               
Cow position:
               
chr3:22021217-22021019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 113
               

               
Conread position:
               
190-527
               

               
Cow position:
               
chr3:56637422-56637746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 115
               

               
Conread position:
               
191-354
               

               
Cow position:
               
chr3:51609573-51609740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
191-363
               

               
Cow position:
               
chr3:56704780-56704616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
191-366
               

               
Cow position:
               
chr3:32399497-32399324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
132, 70
               

               
Conread position:
               
191-367
               

               
Cow position:
               
chr3:79592132-79591950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
191-381
               

               
Cow position:
               
chr3:48370888-48371083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
191-421
               

               
Cow position:
               
chr3:67161688-67161926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 204
               

               
Conread position:
               
191-426
               

               
Cow position:
               
chr3:72172-72409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
191-428
               

               
Cow position:
               
chr3:77467691-77467929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
128, 177
               

               
Conread position:
               
191-435
               

               
Cow position:
               
chr3:42483657-42483904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
191-437
               

               
Cow position:
               
chr3:84000369-84000611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
191-438
               

               
Cow position:
               
chr3:19708344-19708105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
191-438
               

               
Cow position:
               
chr3:80082061-80081814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
180, 62
               

               
Conread position:
               
191-445
               

               
Cow position:
               
chr3:57754727-57754470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 171
               

               
Conread position:
               
191-447
               

               
Cow position:
               
chr3:20437889-20437648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
191-447
               

               
Cow position:
               
chr3:26553955-26553707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
104, 62
               

               
Conread position:
               
191-477
               

               
Cow position:
               
chr3:81473762-81474049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
84, 192
               

               
Conread position:
               
191-502
               

               
Cow position:
               
chr3:12286992-12287293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
191-517
               

               
Cow position:
               
chr3:38346958-38347276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
104, 86
               

               
Conread position:
               
191-519
               

               
Cow position:
               
chr3:66292422-66292088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 170
               

               
Conread position:
               
191-520
               

               
Cow position:
               
chr3:13577429-13577113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
176, 70
               

               
Conread position:
               
191-520
               

               
Cow position:
               
chr3:61143850-61144183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
191-520
               

               
Cow position:
               
chr3:67744871-67744539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
191-524
               

               
Cow position:
               
chr3:27532905-27532562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 294
               

               
Conread position:
               
191-525
               

               
Cow position:
               
chr3:35852711-35852377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 99
               

               
Conread position:
               
191-525
               

               
Cow position:
               
chr3:60265480-60265160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
191-526
               

               
Cow position:
               
chr3:48296466-48296793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 82
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr3:13330016-13329689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr3:17935166-17934842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
263, 45
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr3:18686673-18687003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr3:58540776-58540425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
75, 230
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr3:59630742-59630416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
253, 62
               

               
Conread position:
               
191-528
               

               
Cow position:
               
chr3:75158122-75158452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 46
               

               
Conread position:
               
192-289
               

               
Cow position:
               
chr3:2335040-2335140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
192-326
               

               
Cow position:
               
chr3:22908076-22907940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
192-338
               

               
Cow position:
               
chr3:18607127-18607275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 123
               

               
Conread position:
               
192-343
               

               
Cow position:
               
chr3:51012775-51012624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
192-346
               

               
Cow position:
               
chr3:56523743-56523590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
145, 35
               

               
Conread position:
               
192-347
               

               
Cow position:
               
chr3:65020092-65020248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
192-351
               

               
Cow position:
               
chr3:34392339-34392181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
192-354
               

               
Cow position:
               
chr3:11640192-11640352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
192-357
               

               
Cow position:
               
chr3:48852210-48852039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
192-357
               

               
Cow position:
               
chr3:58158709-58158547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 141
               

               
Conread position:
               
192-358
               

               
Cow position:
               
chr3:35074439-35074606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
192-363
               

               
Cow position:
               
chr3:55970983-55971154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
192-365
               

               
Cow position:
               
chr3:58383726-58383896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
192-368
               

               
Cow position:
               
chr3:53903944-53904111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
192-368
               

               
Cow position:
               
chr3:79148518-79148336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
192-370
               

               
Cow position:
               
chr3:15661942-15661765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
192-371
               

               
Cow position:
               
chr3:35975347-35975171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
192-372
               

               
Cow position:
               
chr3:8717004-8717189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
192-372
               

               
Cow position:
               
chr3:15080981-15080809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
192-372
               

               
Cow position:
               
chr3:16547434-16547613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 60
               

               
Conread position:
               
192-372
               

               
Cow position:
               
chr3:83920956-83921134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 133
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr3:42588107-42588295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr3:74088416-74088232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
82, 144
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr3:79220608-79220792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 73
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr3:79902261-79902444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
114, 63
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr3:82359803-82359980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr3:22872294-22872108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr3:25691507-25691693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-374
               

               
Cow position:
               
chr3:55117214-55117026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
192-388
               

               
Cow position:
               
chr3:26894419-26894614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
192-389
               

               
Cow position:
               
chr3:31501105-31501305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
81, 152
               

               
Conread position:
               
192-393
               

               
Cow position:
               
chr3:81401548-81401348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
80, 97
               

               
Conread position:
               
192-403
               

               
Cow position:
               
chr3:30055688-30055480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
192-411
               

               
Cow position:
               
chr3:61191159-61190952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
192-412
               

               
Cow position:
               
chr3:7858110-7858344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
44, 192
               

               
Conread position:
               
192-412
               

               
Cow position:
               
chr3:22924640-22924437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
192-413
               

               
Cow position:
               
chr3:17695247-17695028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
192-413
               

               
Cow position:
               
chr3:54050261-54050051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
192-414
               

               
Cow position:
               
chr3:16004228-16004011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
192-414
               

               
Cow position:
               
chr3:49454993-49455213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 186
               

               
Conread position:
               
192-415
               

               
Cow position:
               
chr3:35283340-35283113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
80, 197
               

               
Conread position:
               
192-415
               

               
Cow position:
               
chr3:45307692-45307912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
83, 109
               

               
Conread position:
               
192-418
               

               
Cow position:
               
chr3:17952414-17952637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
102, 80
               

               
Conread position:
               
192-418
               

               
Cow position:
               
chr3:54903326-54903552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 41
               

               
Conread position:
               
192-421
               

               
Cow position:
               
chr3:20663780-20663551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
192-422
               

               
Cow position:
               
chr3:4087408-4087176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
103, 74
               

               
Conread position:
               
192-424
               

               
Cow position:
               
chr3:45312811-45313035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
192-425
               

               
Cow position:
               
chr3:41328213-41328429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
192-426
               

               
Cow position:
               
chr3:77496575-77496816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-427
               

               
Cow position:
               
chr3:30701080-30701298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
192-427
               

               
Cow position:
               
chr3:49731880-49731651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
111, 73
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr3:7408241-7408477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
46, 42
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr3:19789361-19789125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr3:27285983-27286218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 184
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr3:41367226-41366991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
175, 71
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr3:59271309-59271532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr3:63861143-63860900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
80, 163
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr3:70333718-70333492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr3:77227076-77227314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
74, 195
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr3:78201025-78201257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
80, 151
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr3:81940009-81940247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 196
               

               
Conread position:
               
192-428
               

               
Cow position:
               
chr3:82657327-82657098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
131, 53
               

               
Conread position:
               
192-429
               

               
Cow position:
               
chr3:4332121-4332355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 171
               

               
Conread position:
               
192-429
               

               
Cow position:
               
chr3:71430454-71430214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
74, 206
               

               
Conread position:
               
192-430
               

               
Cow position:
               
chr3:4457318-4457082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
87, 117
               

               
Conread position:
               
192-430
               

               
Cow position:
               
chr3:52650775-52650537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
73, 200
               

               
Conread position:
               
192-433
               

               
Cow position:
               
chr3:61678449-61678699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
103, 66
               

               
Conread position:
               
192-434
               

               
Cow position:
               
chr3:78782733-78782953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
192-435
               

               
Cow position:
               
chr3:17451176-17450943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
81, 121
               

               
Conread position:
               
192-435
               

               
Cow position:
               
chr3:44623141-44622890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
192-435
               

               
Cow position:
               
chr3:48269621-48269861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 119
               

               
Conread position:
               
192-435
               

               
Cow position:
               
chr3:57554088-57553852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
192-435
               

               
Cow position:
               
chr3:62999247-62999011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 109
               

               
Conread position:
               
192-437
               

               
Cow position:
               
chr3:5416473-5416222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 159
               

               
Conread position:
               
192-437
               

               
Cow position:
               
chr3:28692672-28692431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
192-437
               

               
Cow position:
               
chr3:60892390-60892621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
192-437
               

               
Cow position:
               
chr3:66610080-66609844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr3:9843341-9843586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
80, 155
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr3:27544571-27544334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr3:48923755-48923522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr3:54959948-54960188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
103, 44
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr3:74499982-74500242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
192-438
               

               
Cow position:
               
chr3:77188200-77188437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
104, 43
               

               
Conread position:
               
192-439
               

               
Cow position:
               
chr3:74409249-74409485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
192-442
               

               
Cow position:
               
chr3:29807220-29807470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
82, 186
               

               
Conread position:
               
192-442
               

               
Cow position:
               
chr3:79208245-79207983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
80, 146
               

               
Conread position:
               
192-445
               

               
Cow position:
               
chr3:43233261-43233512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
80, 175
               

               
Conread position:
               
192-445
               

               
Cow position:
               
chr3:53384525-53384274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
192-446
               

               
Cow position:
               
chr3:27289695-27289946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
153, 124
               

               
Conread position:
               
192-446
               

               
Cow position:
               
chr3:59514869-59515111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:5851170-5850921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:11987088-11987337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
104, 43
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:14465946-14465698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
184, 26
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:15954319-15954077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
201, 81
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:17456511-17456260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
84, 130
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:17957225-17957475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
109, 8
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:22820327-22820580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
175, 50
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:25690543-25690801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 168
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:28898465-28898215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
112, 73
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:30009152-30008900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 71
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:30463408-30463164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
238, 72
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:37186591-37186835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:42177916-42178165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:49461179-49460918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 185
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:53572992-53572744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
136, 63
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:53592943-53592681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 215
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:55947333-55947592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
83, 197
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:60933173-60933425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:61171752-61171500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
103, 80
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:66900984-66900725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
106, 73
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:67929508-67929252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:71161552-71161807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:74621239-74620981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:75727831-75727576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:76172904-76172661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
192-447
               

               
Cow position:
               
chr3:81277945-81277690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 187
               

               
Conread position:
               
192-448
               

               
Cow position:
               
chr3:14633229-14632974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
192-448
               

               
Cow position:
               
chr3:45524022-45524276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
192-451
               

               
Cow position:
               
chr3:16157438-16157688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
192-451
               

               
Cow position:
               
chr3:37599658-37599416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
192-453
               

               
Cow position:
               
chr3:17895612-17895858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
175, 42
               

               
Conread position:
               
192-453
               

               
Cow position:
               
chr3:23876756-23877011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
112, 59
               

               
Conread position:
               
192-455
               

               
Cow position:
               
chr3:68647918-68648182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
81, 182
               

               
Conread position:
               
192-456
               

               
Cow position:
               
chr3:5899583-5899840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
192-456
               

               
Cow position:
               
chr3:72018877-72019136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
192-457
               

               
Cow position:
               
chr3:68583245-68582986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
192-482
               

               
Cow position:
               
chr3:13899695-13899406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 190
               

               
Conread position:
               
192-483
               

               
Cow position:
               
chr3:65800350-65800637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
192-494
               

               
Cow position:
               
chr3:73759759-73759454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
192-502
               

               
Cow position:
               
chr3:23445132-23444817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
106, 56
               

               
Conread position:
               
192-503
               

               
Cow position:
               
chr3:69849744-69849443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
163, 56
               

               
Conread position:
               
192-504
               

               
Cow position:
               
chr3:2397025-2396716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 161
               

               
Conread position:
               
192-511
               

               
Cow position:
               
chr3:4031726-4032043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 65
               

               
Conread position:
               
192-511
               

               
Cow position:
               
chr3:61840047-61840355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
268, 44
               

               
Conread position:
               
192-511
               

               
Cow position:
               
chr3:72675845-72676171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
66, 191
               

               
Conread position:
               
192-511
               

               
Cow position:
               
chr3:75057361-75057066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
192-512
               

               
Cow position:
               
chr3:5374091-5374409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 145
               

               
Conread position:
               
192-512
               

               
Cow position:
               
chr3:25754794-25755101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 80
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr3:5096962-5097290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 62
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr3:29887666-29887337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr3:59799012-59799331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
261, 37
               

               
Conread position:
               
192-516
               

               
Cow position:
               
chr3:64011059-64010730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
160, 35
               

               
Conread position:
               
192-517
               

               
Cow position:
               
chr3:53112927-53113261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
81, 192
               

               
Conread position:
               
192-517
               

               
Cow position:
               
chr3:59101593-59101913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
192-518
               

               
Cow position:
               
chr3:54782252-54781917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
181, 10
               

               
Conread position:
               
192-518
               

               
Cow position:
               
chr3:59473870-59474209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
75, 157
               

               
Conread position:
               
192-518
               

               
Cow position:
               
chr3:71231164-71231482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
192-518
               

               
Cow position:
               
chr3:79884729-79884399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
192-519
               

               
Cow position:
               
chr3:2024942-2025285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
192-519
               

               
Cow position:
               
chr3:3985088-3985410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
177, 63
               

               
Conread position:
               
192-519
               

               
Cow position:
               
chr3:55189993-55189666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
192-519
               

               
Cow position:
               
chr3:75479770-75480087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 51
               

               
Conread position:
               
192-519
               

               
Cow position:
               
chr3:83816035-83815700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 109
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr3:2538009-2538328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
102, 187
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr3:16333564-16333888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr3:18459762-18459439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr3:26682036-26681725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
183, 78
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr3:36672245-36671906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
80, 197
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr3:45647897-45648219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
261, 61
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr3:50768436-50768768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 189
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr3:55970262-55970595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 185
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr3:70565980-70565649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr3:72390838-72391171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 190
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr3:77006263-77006559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr3:2680269-2680603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
44, 197
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr3:7566661-7566327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr3:20675121-20674789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr3:23471710-23471369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 143
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr3:33253123-33252799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr3:48362841-48363162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr3:59000988-59000667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
241, 74
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr3:71497387-71497048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 138
               

               
Conread position:
               
192-522
               

               
Cow position:
               
chr3:55085426-55085078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
192-522
               

               
Cow position:
               
chr3:79292592-79292918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
192-523
               

               
Cow position:
               
chr3:10347113-10347447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 75
               

               
Conread position:
               
192-523
               

               
Cow position:
               
chr3:73764438-73764108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:115965-116283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:210081-210412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:8393697-8394036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
259, 61
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:26219304-26218960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:30179841-30180179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
105, 69
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:31309597-31309261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:34270688-34271007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:42423573-42423235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:49230768-49231092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 174
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:49650137-49650481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 198
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:53270584-53270923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
81, 59
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:55272285-55271952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 75
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:62789442-62789082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:71237915-71238246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:74233953-74234279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:75050860-75050525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
184, 73
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:80071874-80072223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 209
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:82020086-82019746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 122
               

               
Conread position:
               
192-524
               

               
Cow position:
               
chr3:83455394-83455059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 115
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr3:525112-525440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
261, 56
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr3:2216117-2216462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
80, 195
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr3:5101003-5100678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
239, 68
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr3:26065759-26066095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 184
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr3:49140293-49139943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 188
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr3:52017515-52017865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
103, 194
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr3:52652316-52651985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr3:53046899-53046569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr3:53150085-53150425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr3:54740114-54739793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
199, 75
               

               
Conread position:
               
192-525
               

               
Cow position:
               
chr3:70895804-70896146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 149
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr3:12705801-12705449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 189
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr3:14552636-14552970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
260, 65
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr3:15229061-15228729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr3:15752870-15752541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 51
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr3:26970583-26970908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr3:58767037-58767358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
182, 32
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr3:59610966-59610622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 169
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr3:62826865-62826524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 183
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr3:63179626-63179937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
106, 57
               

               
Conread position:
               
192-526
               

               
Cow position:
               
chr3:67704298-67704641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr3:5365444-5365773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
262, 47
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr3:7331359-7331032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 180
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr3:8393104-8393441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 167
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr3:9641322-9641664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr3:38691648-38691308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr3:48578599-48578924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
178, 28
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr3:65058459-65058793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr3:73460736-73461062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 80
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr3:73708807-73709142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 20
               

               
Conread position:
               
192-527
               

               
Cow position:
               
chr3:80740330-80740658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
175, 61
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:1830805-1830479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
257, 17
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:2393208-2392871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 194
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:2674787-2675126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:3032153-3032505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:3738242-3738578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 122
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:4461731-4461385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:6873487-6873155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:10958471-10958143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 48
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:13302098-13301754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 184
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:14263150-14263489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
103, 71
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:14626394-14626053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 44
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:17222386-17222042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:18066892-18067229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:18393626-18393296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
251, 56
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:19006425-19006754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
223, 69
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:20802872-20802536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:21081627-21081289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 5
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:26903873-26904206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:26920654-26921007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
58, 160
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:29360380-29360054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
256, 20
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:29596152-29596487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:29813001-29813329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 193
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:32584916-32585247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 73
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:37041185-37041517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
197, 58
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:39970114-39969765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 196
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:44932266-44932610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:45534542-45534202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 140
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:45881667-45881995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:47284595-47284909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:49482951-49482618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
102, 74
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:51234338-51234000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:52607941-52608279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 151
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:52863427-52863086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
105, 37
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:53221772-53222110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:55124520-55124185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:55836071-55835723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 188
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:56059565-56059908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:56476440-56476779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 75
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:57577452-57577793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
103, 153
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:59604628-59604940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
259, 50
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:60597306-60597639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:61224977-61224645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
257, 46
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:61278664-61279005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 194
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:65236783-65237121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:65413518-65413180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
259, 31
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:65968912-65969264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:66885280-66884932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
80, 145
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:70401660-70401993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
257, 73
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:70899658-70899987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 69
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:73467377-73467732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:75080524-75080857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 143
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:77271509-77271180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
259, 74
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:77365536-77365193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:78894556-78894244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:78946078-78945742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:80053776-80053447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:80564718-80565064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:81371414-81371746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
236, 45
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:81471343-81470999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:82460942-82461276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
192-528
               

               
Cow position:
               
chr3:83474505-83474842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 57
               

               
Conread position:
               
193-353
               

               
Cow position:
               
chr3:18854852-18855013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
193-375
               

               
Cow position:
               
chr3:6853742-6853565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
193-413
               

               
Cow position:
               
chr3:23448372-23448163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
193-420
               

               
Cow position:
               
chr3:8604255-8604037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
193-428
               

               
Cow position:
               
chr3:3164737-3164506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
193-447
               

               
Cow position:
               
chr3:21341205-21340953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
193-447
               

               
Cow position:
               
chr3:46900953-46901207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
193-447
               

               
Cow position:
               
chr3:49382711-49382957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
193-447
               

               
Cow position:
               
chr3:61857255-61857517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
193-505
               

               
Cow position:
               
chr3:55992112-55991794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
77, 211
               

               
Conread position:
               
193-510
               

               
Cow position:
               
chr3:56612-56298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
193-514
               

               
Cow position:
               
chr3:17937080-17936755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 123
               

               
Conread position:
               
193-514
               

               
Cow position:
               
chr3:68627916-68627606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
258, 47
               

               
Conread position:
               
193-520
               

               
Cow position:
               
chr3:5420107-5419775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 152
               

               
Conread position:
               
193-527
               

               
Cow position:
               
chr3:59691663-59691984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
260, 35
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr3:23169311-23168969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 150
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr3:64281177-64280834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 186
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr3:69750941-69750630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
193-528
               

               
Cow position:
               
chr3:74600876-74601213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
264, 44
               

               
Conread position:
               
194-353
               

               
Cow position:
               
chr3:61467365-61467525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 137
               

               
Conread position:
               
194-358
               

               
Cow position:
               
chr3:28939154-28938983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
194-413
               

               
Cow position:
               
chr3:13118105-13118316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
81, 107
               

               
Conread position:
               
194-428
               

               
Cow position:
               
chr3:43528477-43528247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
173, 70
               

               
Conread position:
               
194-429
               

               
Cow position:
               
chr3:49787166-49787404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
79, 173
               

               
Conread position:
               
194-436
               

               
Cow position:
               
chr3:11019878-11020115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
194-438
               

               
Cow position:
               
chr3:63332570-63332811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 185
               

               
Conread position:
               
194-444
               

               
Cow position:
               
chr3:16362978-16362730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 197
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr3:8147905-8147659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr3:31206632-31206884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
73, 80
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr3:39661690-39661448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr3:61539556-61539814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
81, 181
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr3:78076949-78077193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
194-454
               

               
Cow position:
               
chr3:49793169-49793411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
194-484
               

               
Cow position:
               
chr3:5045050-5044760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
66, 203
               

               
Conread position:
               
194-520
               

               
Cow position:
               
chr3:57763983-57764306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 181
               

               
Conread position:
               
194-521
               

               
Cow position:
               
chr3:73394876-73395206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
79, 186
               

               
Conread position:
               
194-523
               

               
Cow position:
               
chr3:64172205-64172532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
194-524
               

               
Cow position:
               
chr3:2506721-2506386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
78, 181
               

               
Conread position:
               
194-525
               

               
Cow position:
               
chr3:70334941-70334601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
194-527
               

               
Cow position:
               
chr3:54945884-54946227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 185
               

               
Conread position:
               
194-527
               

               
Cow position:
               
chr3:59208574-59208890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr3:7338014-7337687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
81, 115
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr3:13353117-13353461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 185
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr3:16752493-16752162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 73
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr3:53790781-53790439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 185
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr3:54434733-54435066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
71, 109
               

               
Conread position:
               
194-528
               

               
Cow position:
               
chr3:82056358-82056022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
58, 198
               

               
Conread position:
               
195-376
               

               
Cow position:
               
chr3:23277781-23277603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
99, 77
               

               
Conread position:
               
195-383
               

               
Cow position:
               
chr3:2518776-2518583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
195-397
               

               
Cow position:
               
chr3:15057837-15057647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
195-414
               

               
Cow position:
               
chr3:59885134-59885368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
195-429
               

               
Cow position:
               
chr3:64716782-64717015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 121
               

               
Conread position:
               
195-431
               

               
Cow position:
               
chr3:2036059-2036291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
195-431
               

               
Cow position:
               
chr3:30358873-30358641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
195-431
               

               
Cow position:
               
chr3:30417890-30418128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 74
               

               
Conread position:
               
195-457
               

               
Cow position:
               
chr3:20256961-20257229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
78, 195
               

               
Conread position:
               
195-457
               

               
Cow position:
               
chr3:70675981-70676237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 175
               

               
Conread position:
               
195-469
               

               
Cow position:
               
chr3:80973114-80973379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
195-472
               

               
Cow position:
               
chr3:6078574-6078294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 166
               

               
Conread position:
               
195-520
               

               
Cow position:
               
chr3:8060893-8061215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 36
               

               
Conread position:
               
195-521
               

               
Cow position:
               
chr3:69961950-69961647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
195-522
               

               
Cow position:
               
chr3:80581432-80581746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
195-525
               

               
Cow position:
               
chr3:74533109-74533443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 146
               

               
Conread position:
               
195-526
               

               
Cow position:
               
chr3:15158802-15159126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
195-526
               

               
Cow position:
               
chr3:53739429-53739090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 184
               

               
Conread position:
               
195-527
               

               
Cow position:
               
chr3:51578560-51578228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
231, 107
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr3:7678432-7678750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr3:22232882-22232560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 36
               

               
Conread position:
               
195-528
               

               
Cow position:
               
chr3:22716519-22716199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
196-353
               

               
Cow position:
               
chr3:4861451-4861605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
196-438
               

               
Cow position:
               
chr3:33698483-33698730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
69, 196
               

               
Conread position:
               
196-487
               

               
Cow position:
               
chr3:34937602-34937900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
196-510
               

               
Cow position:
               
chr3:58969134-58968824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
196-528
               

               
Cow position:
               
chr3:14601952-14601607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
196-528
               

               
Cow position:
               
chr3:57624229-57624561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
197-366
               

               
Cow position:
               
chr3:29334751-29334580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
197-374
               

               
Cow position:
               
chr3:31419464-31419641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
197-438
               

               
Cow position:
               
chr3:364456-364213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
78, 179
               

               
Conread position:
               
197-528
               

               
Cow position:
               
chr3:13507226-13507565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 138
               

               
Conread position:
               
198-428
               

               
Cow position:
               
chr3:73590235-73590005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
198-447
               

               
Cow position:
               
chr3:18217002-18216757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 101
               

               
Conread position:
               
198-447
               

               
Cow position:
               
chr3:46350423-46350681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
77, 252
               

               
Conread position:
               
198-514
               

               
Cow position:
               
chr3:49327701-49328026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 177
               

               
Conread position:
               
198-526
               

               
Cow position:
               
chr3:15052181-15051858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 39
               

               
Conread position:
               
198-527
               

               
Cow position:
               
chr3:28908431-28908107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
193, 39
               

               
Conread position:
               
198-528
               

               
Cow position:
               
chr3:73443324-73442999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 70
               

               
Conread position:
               
199-347
               

               
Cow position:
               
chr3:14717571-14717722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 135
               

               
Conread position:
               
199-450
               

               
Cow position:
               
chr3:31047184-31046940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
199-528
               

               
Cow position:
               
chr3:17447843-17447518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
199-528
               

               
Cow position:
               
chr3:27274298-27274625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 68
               

               
Conread position:
               
199-528
               

               
Cow position:
               
chr3:76387834-76387513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
202-470
               

               
Cow position:
               
chr3:55106675-55106410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
203-506
               

               
Cow position:
               
chr3:22676316-22676035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
171, 33
               

               
Conread position:
               
203-514
               

               
Cow position:
               
chr3:68881346-68881039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
203-526
               

               
Cow position:
               
chr3:68708238-68707918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
204-447
               

               
Cow position:
               
chr3:56301578-56301346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
69, 177
               

               
Conread position:
               
207-369
               

               
Cow position:
               
chr3:23215811-23215638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
207-428
               

               
Cow position:
               
chr3:42489537-42489312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
207-428
               

               
Cow position:
               
chr3:42594884-42594663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
207-429
               

               
Cow position:
               
chr3:74119673-74119445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
207-447
               

               
Cow position:
               
chr3:188632-188880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
207-447
               

               
Cow position:
               
chr3:68146063-68145835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
207-507
               

               
Cow position:
               
chr3:76015072-76015368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
207-518
               

               
Cow position:
               
chr3:59333540-59333844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
45, 127
               

               
Conread position:
               
207-521
               

               
Cow position:
               
chr3:15506220-15506538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 135
               

               
Conread position:
               
207-525
               

               
Cow position:
               
chr3:15192337-15192674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
207-525
               

               
Cow position:
               
chr3:45647449-45647774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 125
               

               
Conread position:
               
207-527
               

               
Cow position:
               
chr3:67930404-67930089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 27
               

               
Conread position:
               
207-528
               

               
Cow position:
               
chr3:19404096-19404395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
223, 54
               

               
Conread position:
               
208-519
               

               
Cow position:
               
chr3:61009662-61009353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
208-521
               

               
Cow position:
               
chr3:26960821-26960498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
67, 172
               

               
Conread position:
               
208-524
               

               
Cow position:
               
chr3:68156504-68156816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
208-528
               

               
Cow position:
               
chr3:38863891-38864224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 59
               

               
Conread position:
               
208-528
               

               
Cow position:
               
chr3:53240047-53240354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
187, 20
               

               
Conread position:
               
209-348
               

               
Cow position:
               
chr3:22734500-22734363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
209-447
               

               
Cow position:
               
chr3:14625612-14625382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
209-528
               

               
Cow position:
               
chr3:74134480-74134801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
210-453
               

               
Cow position:
               
chr3:56612132-56612375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
211-447
               

               
Cow position:
               
chr3:6772821-6772584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 178
               

               
Conread position:
               
211-522
               

               
Cow position:
               
chr3:11711729-11712056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 176
               

               
Conread position:
               
211-527
               

               
Cow position:
               
chr3:71135565-71135883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 162
               

               
Conread position:
               
211-528
               

               
Cow position:
               
chr3:78092733-78092415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
212-519
               

               
Cow position:
               
chr3:2198660-2198970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
212-528
               

               
Cow position:
               
chr3:83215031-83215359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
213-528
               

               
Cow position:
               
chr3:2630582-2630861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
222, 24
               

               
Conread position:
               
213-528
               

               
Cow position:
               
chr3:11063157-11063462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 134
               

               
Conread position:
               
214-438
               

               
Cow position:
               
chr3:15859891-15859667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 108
               

               
Conread position:
               
214-528
               

               
Cow position:
               
chr3:45211075-45211398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
217-447
               

               
Cow position:
               
chr3:25944860-25945101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
217-466
               

               
Cow position:
               
chr3:62790237-62789983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
48, 145
               

               
Conread position:
               
217-526
               

               
Cow position:
               
chr3:83845687-83846005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
218-447
               

               
Cow position:
               
chr3:35005561-35005784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
218-528
               

               
Cow position:
               
chr3:4319494-4319807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
219-339
               

               
Cow position:
               
chr3:5082857-5082734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
219-520
               

               
Cow position:
               
chr3:70609407-70609715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
219-528
               

               
Cow position:
               
chr3:25477597-25477902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
219-528
               

               
Cow position:
               
chr3:76713537-76713219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
220-432
               

               
Cow position:
               
chr3:25059859-25060073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
53, 160
               

               
Conread position:
               
220-447
               

               
Cow position:
               
chr3:39328186-39328408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
220-447
               

               
Cow position:
               
chr3:74878804-74878581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
221-443
               

               
Cow position:
               
chr3:21693728-21693955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 144
               

               
Conread position:
               
222-524
               

               
Cow position:
               
chr3:36375760-36375447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 122
               

               
Conread position:
               
225-404
               

               
Cow position:
               
chr3:38828554-38828732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
226-528
               

               
Cow position:
               
chr3:76268189-76267878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
229-528
               

               
Cow position:
               
chr3:55712220-55712537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
233-528
               

               
Cow position:
               
chr3:30940615-30940904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
138, 39
               

               
Conread position:
               
238-445
               

               
Cow position:
               
chr3:77665976-77665764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
238-527
               

               
Cow position:
               
chr3:54506515-54506803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
212, 29
               

               
Conread position:
               
239-528
               

               
Cow position:
               
chr3:59884272-59883971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
240-437
               

               
Cow position:
               
chr3:27697177-27696980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 132
               

               
Conread position:
               
240-447
               

               
Cow position:
               
chr3:49218513-49218306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 140
               

               
Conread position:
               
240-504
               

               
Cow position:
               
chr3:75711113-75711379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
240-505
               

               
Cow position:
               
chr3:7940750-7940483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
207, 20
               

               
Conread position:
               
240-506
               

               
Cow position:
               
chr3:3637988-3638253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
240-528
               

               
Cow position:
               
chr3:14598752-14599033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
35, 94
               

               
Conread position:
               
240-528
               

               
Cow position:
               
chr3:57760299-57760595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
5, 142
               

               
Conread position:
               
241-520
               

               
Cow position:
               
chr3:24352668-24352949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
207, 31
               

               
Conread position:
               
241-521
               

               
Cow position:
               
chr3:44101776-44102057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
242-447
               

               
Cow position:
               
chr3:70631822-70632029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
243-527
               

               
Cow position:
               
chr3:74079834-74079541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 136
               

               
Conread position:
               
244-520
               

               
Cow position:
               
chr3:23105560-23105273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
31, 144
               

               
Conread position:
               
244-524
               

               
Cow position:
               
chr3:6182394-6182134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
244-525
               

               
Cow position:
               
chr3:66884135-66883851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
29, 136
               

               
Conread position:
               
244-526
               

               
Cow position:
               
chr3:71246833-71247116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
244-528
               

               
Cow position:
               
chr3:57273872-57274158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
246-512
               

               
Cow position:
               
chr3:24872531-24872785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
219, 23
               

               
Conread position:
               
247-520
               

               
Cow position:
               
chr3:63269034-63269311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
247-528
               

               
Cow position:
               
chr3:23408542-23408261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 127
               

               
Conread position:
               
248-528
               

               
Cow position:
               
chr3:59596995-59597275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
27, 152
               

               
Conread position:
               
249-421
               

               
Cow position:
               
chr3:27212173-27212346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 145
               

               
Conread position:
               
249-528
               

               
Cow position:
               
chr3:4050006-4050290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 138
               

               
Conread position:
               
251-528
               

               
Cow position:
               
chr3:49790995-49790715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
253-447
               

               
Cow position:
               
chr3:75687624-75687429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 132
               

               
Conread position:
               
253-527
               

               
Cow position:
               
chr3:20678020-20677746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
254-518
               

               
Cow position:
               
chr3:15751906-15751627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
19, 172
               

               
Conread position:
               
255-519
               

               
Cow position:
               
chr3:84597143-84596877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
257-517
               

               
Cow position:
               
chr3:34669909-34669647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
257-525
               

               
Cow position:
               
chr3:79094222-79093949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
259-524
               

               
Cow position:
               
chr3:68586844-68587114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
259-528
               

               
Cow position:
               
chr3:75046054-75045779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 136
               

               
Conread position:
               
260-447
               

               
Cow position:
               
chr3:15992541-15992726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
260-528
               

               
Cow position:
               
chr3:36418644-36418387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
266-514
               

               
Cow position:
               
chr3:50069595-50069846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
187, 84
               

               
Conread position:
               
269-524
               

               
Cow position:
               
chr3:53508455-53508704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
184, 75
               

               
Conread position:
               
272-514
               

               
Cow position:
               
chr3:73915967-73915725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 113
               

               
Conread position:
               
273-428
               

               
Cow position:
               
chr3:27247351-27247200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
273-447
               

               
Cow position:
               
chr3:34294447-34294262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
273-447
               

               
Cow position:
               
chr3:56523592-56523434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
273-512
               

               
Cow position:
               
chr3:55109777-55109532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
178, 7
               

               
Conread position:
               
273-514
               

               
Cow position:
               
chr3:62046500-62046747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
150, 61
               

               
Conread position:
               
273-522
               

               
Cow position:
               
chr3:30222023-30222282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
273-523
               

               
Cow position:
               
chr3:55819585-55819842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 183
               

               
Conread position:
               
273-526
               

               
Cow position:
               
chr3:19792730-19793000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 222
               

               
Conread position:
               
273-526
               

               
Cow position:
               
chr3:70762285-70762028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 96
               

               
Conread position:
               
273-528
               

               
Cow position:
               
chr3:48810799-48810549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
176, 56
               

               
Conread position:
               
273-528
               

               
Cow position:
               
chr3:68616487-68616233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
182, 56
               

               
Conread position:
               
273-528
               

               
Cow position:
               
chr3:76922825-76922566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 129
               

               
Conread position:
               
274-528
               

               
Cow position:
               
chr3:60264876-60264619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
177, 27
               

               
Conread position:
               
275-528
               

               
Cow position:
               
chr3:74242835-74243089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
136, 60
               

               
Conread position:
               
276-441
               

               
Cow position:
               
chr3:2851054-2850892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
276-447
               

               
Cow position:
               
chr3:59034874-59035048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
277-520
               

               
Cow position:
               
chr3:77581950-77582195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
277-524
               

               
Cow position:
               
chr3:15153534-15153784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
171, 54
               

               
Conread position:
               
278-520
               

               
Cow position:
               
chr3:19585704-19585952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
173, 98
               

               
Conread position:
               
279-520
               

               
Cow position:
               
chr3:32184177-32183942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr3:26874433-26874688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
282-511
               

               
Cow position:
               
chr3:46541981-46541749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
169, 77
               

               
Conread position:
               
283-528
               

               
Cow position:
               
chr3:55177905-55177649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
286-528
               

               
Cow position:
               
chr3:22221170-22221424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
286-528
               

               
Cow position:
               
chr3:79196610-79196859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
165, 66
               

               
Conread position:
               
289-526
               

               
Cow position:
               
chr3:3883965-3883720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
163, 197
               

               
Conread position:
               
290-447
               

               
Cow position:
               
chr3:75105230-75105075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
291-524
               

               
Cow position:
               
chr3:20993667-20993906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
158, 65
               

               
Conread position:
               
292-528
               

               
Cow position:
               
chr3:1785385-1785147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
161, 60
               

               
Conread position:
               
294-528
               

               
Cow position:
               
chr3:17331585-17331822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
161, 130
               

               
Conread position:
               
295-524
               

               
Cow position:
               
chr3:78093524-78093296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
156, 83
               

               
Conread position:
               
300-521
               

               
Cow position:
               
chr3:73820505-73820281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
148, 49
               

               
Conread position:
               
300-524
               

               
Cow position:
               
chr3:43726942-43727164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
144, 26
               

               
Conread position:
               
300-526
               

               
Cow position:
               
chr3:17235344-17235122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
161, 25
               

               
Conread position:
               
302-522
               

               
Cow position:
               
chr3:51349679-51349914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
302-526
               

               
Cow position:
               
chr3:71238340-71238563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
145, 81
               

               
Conread position:
               
305-526
               

               
Cow position:
               
chr3:7661722-7661947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
56, 72
               

               
Conread position:
               
305-527
               

               
Cow position:
               
chr3:73237064-73237292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
152, 28
               

               
Conread position:
               
306-526
               

               
Cow position:
               
chr3:16254953-16254746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
159, 35
               

               
Conread position:
               
306-528
               

               
Cow position:
               
chr3:51402779-51402999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 63
               

               
Conread position:
               
307-528
               

               
Cow position:
               
chr3:14194307-14194083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
130, 8
               

               
Conread position:
               
309-528
               

               
Cow position:
               
chr3:35621176-35621399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 83
               

               
Conread position:
               
311-519
               

               
Cow position:
               
chr3:6520099-6519881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
315-528
               

               
Cow position:
               
chr3:73298966-73299176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
138, 59
               

               
Conread position:
               
316-528
               

               
Cow position:
               
chr3:15951031-15950816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
132, 60
               

               
Conread position:
               
317-528
               

               
Cow position:
               
chr3:63177360-63177579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
68, 202
               

               
Conread position:
               
322-528
               

               
Cow position:
               
chr3:33693704-33693916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
323-493
               

               
Cow position:
               
chr3:12670726-12670553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
324-527
               

               
Cow position:
               
chr3:18059590-18059799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
327-521
               

               
Cow position:
               
chr3:57704214-57704423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
67, 59
               

               
Conread position:
               
327-528
               

               
Cow position:
               
chr3:55983986-55984195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
328-512
               

               
Cow position:
               
chr3:9116920-9117107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
118, 41
               

               
Conread position:
               
328-520
               

               
Cow position:
               
chr3:54290623-54290422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
329-520
               

               
Cow position:
               
chr3:32409104-32409301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
122, 47
               

               
Conread position:
               
329-528
               

               
Cow position:
               
chr3:31361312-31361522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
330-528
               

               
Cow position:
               
chr3:3316918-3316721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
120, 42
               

               
Conread position:
               
330-528
               

               
Cow position:
               
chr3:22165523-22165319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
123, 48
               

               
Conread position:
               
337-514
               

               
Cow position:
               
chr3:64135616-64135801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
44, 35
               

               
Conread position:
               
338-528
               

               
Cow position:
               
chr3:47753126-47753323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
341-510
               

               
Cow position:
               
chr3:3471943-3472119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
341-520
               

               
Cow position:
               
chr3:49363020-49363198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
347-512
               

               
Cow position:
               
chr3:75608408-75608579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
348-500
               

               
Cow position:
               
chr3:70614574-70614418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
350-528
               

               
Cow position:
               
chr3:64196738-64196925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
351-521
               

               
Cow position:
               
chr3:15172993-15173171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
351-526
               

               
Cow position:
               
chr3:19682607-19682792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
351-527
               

               
Cow position:
               
chr3:18001116-18001295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
353-528
               

               
Cow position:
               
chr3:10668962-10668782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
353-528
               

               
Cow position:
               
chr3:44330521-44330340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
354-528
               

               
Cow position:
               
chr3:3478338-3478158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
354-528
               

               
Cow position:
               
chr3:4480858-4481039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
354-528
               

               
Cow position:
               
chr3:54982163-54981982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
360-524
               

               
Cow position:
               
chr3:36672886-36672718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
383-523
               

               
Cow position:
               
chr3:41652319-41652468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
383-528
               

               
Cow position:
               
chr3:9120789-9120939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
385-528
               

               
Cow position:
               
chr3:68004756-68004605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
385-528
               

               
Cow position:
               
chr3:82629262-82629412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
66, 129
               

               
Conread position:
               
388-521
               

               
Cow position:
               
chr3:5305747-5305888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
392-528
               

               
Cow position:
               
chr3:16505522-16505382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               
Show alignments to all cow chromosomes.