Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rpigcf0_010910.5
        

               Conread position:
               163-445
               

               Cow position:
               chr5:74003853-74003578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               30, 74
               

               Conread position:
               168-447
               

               Cow position:
               chr5:7552633-7552358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               161, 36
               

               Conread position:
               181-528
               

               Cow position:
               chr5:69731313-69731647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               93, 55
               

               Conread position:
               183-528
               

               Cow position:
               chr5:34561806-34562165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 197
               

               Conread position:
               184-433
               

               Cow position:
               chr5:46499097-46499342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               112, 82
               

               Conread position:
               186-448
               

               Cow position:
               chr5:74610891-74610640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               186-528
               

               Cow position:
               chr5:43457718-43457384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               86, 63
               

               Conread position:
               188-426
               

               Cow position:
               chr5:9234278-9234034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               188-527
               

               Cow position:
               chr5:22643415-22643086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               79, 85
               

               Conread position:
               188-528
               

               Cow position:
               chr5:48143988-48143641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               83, 222
               

               Conread position:
               189-336
               

               Cow position:
               chr5:14703163-14703016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               81, 112
               

               Conread position:
               189-354
               

               Cow position:
               chr5:63840342-63840176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               84, 95
               

               Conread position:
               189-365
               

               Cow position:
               chr5:29504913-29505088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               83, 132
               

               Conread position:
               189-374
               

               Cow position:
               chr5:6986962-6987151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               82, 122
               

               Conread position:
               189-375
               

               Cow position:
               chr5:33467237-33467053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               134, 78
               

               Conread position:
               189-394
               

               Cow position:
               chr5:17631066-17630869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               81, 112
               

               Conread position:
               189-437
               

               Cow position:
               chr5:71504929-71505176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               195, 86
               

               Conread position:
               189-438
               

               Cow position:
               chr5:72172827-72173076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               81, 135
               

               Conread position:
               189-446
               

               Cow position:
               chr5:63185450-63185197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               81, 118
               

               Conread position:
               189-447
               

               Cow position:
               chr5:28946255-28946002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 65
               

               Conread position:
               189-456
               

               Cow position:
               chr5:44587491-44587221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               6, 203
               

               Conread position:
               189-505
               

               Cow position:
               chr5:3649657-3649338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               81, 44
               

               Conread position:
               189-505
               

               Cow position:
               chr5:22934653-22934332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               81, 154
               

               Conread position:
               189-505
               

               Cow position:
               chr5:34184023-34184347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 205
               

               Conread position:
               189-506
               

               Cow position:
               chr5:39442097-39442422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               86, 102
               

               Conread position:
               189-519
               

               Cow position:
               chr5:40388062-40387744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               183, 37
               

               Conread position:
               189-520
               

               Cow position:
               chr5:27007699-27008032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 57
               

               Conread position:
               189-520
               

               Cow position:
               chr5:41604416-41604762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               82, 55
               

               Conread position:
               189-520
               

               Cow position:
               chr5:51502816-51503142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               255, 83
               

               Conread position:
               189-523
               

               Cow position:
               chr5:58320658-58320329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               78, 61
               

               Conread position:
               189-524
               

               Cow position:
               chr5:17027898-17028238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 56
               

               Conread position:
               189-525
               

               Cow position:
               chr5:32282134-32282480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               81, 138
               

               Conread position:
               189-526
               

               Cow position:
               chr5:4710339-4710007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               56, 26
               

               Conread position:
               189-527
               

               Cow position:
               chr5:26046137-26046468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               76, 66
               

               Conread position:
               190-387
               

               Cow position:
               chr5:61488308-61488106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 142
               

               Conread position:
               190-414
               

               Cow position:
               chr5:7763877-7764099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               89, 179
               

               Conread position:
               190-429
               

               Cow position:
               chr5:65924894-65924649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               190-434
               

               Cow position:
               chr5:14153948-14154197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 185
               

               Conread position:
               190-438
               

               Cow position:
               chr5:38805539-38805295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 54
               

               Conread position:
               190-521
               

               Cow position:
               chr5:50215754-50215424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               191-365
               

               Cow position:
               chr5:27690253-27690080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               81, 66
               

               Conread position:
               191-381
               

               Cow position:
               chr5:57126818-57127008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               191-388
               

               Cow position:
               chr5:26099565-26099377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               191-423
               

               Cow position:
               chr5:19470381-19470156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               84, 134
               

               Conread position:
               191-428
               

               Cow position:
               chr5:15882670-15882425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 187
               

               Conread position:
               191-428
               

               Cow position:
               chr5:26561959-26562197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               79, 110
               

               Conread position:
               191-428
               

               Cow position:
               chr5:61030423-61030183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 183
               

               Conread position:
               191-433
               

               Cow position:
               chr5:51076838-51076600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               76, 82
               

               Conread position:
               191-435
               

               Cow position:
               chr5:37714099-37713848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               45, 222
               

               Conread position:
               191-438
               

               Cow position:
               chr5:29212754-29212993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               191-438
               

               Cow position:
               chr5:39695458-39695701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               81, 14
               

               Conread position:
               191-447
               

               Cow position:
               chr5:32956286-32956036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               191-447
               

               Cow position:
               chr5:34441986-34441722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               191-447
               

               Cow position:
               chr5:37425548-37425801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               74, 110
               

               Conread position:
               191-447
               

               Cow position:
               chr5:52645270-52645022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               191-467
               

               Cow position:
               chr5:35209671-35209399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               74, 132
               

               Conread position:
               191-505
               

               Cow position:
               chr5:1344053-1343731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               79, 132
               

               Conread position:
               191-523
               

               Cow position:
               chr5:71454789-71454470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               207, 72
               

               Conread position:
               191-525
               

               Cow position:
               chr5:18898789-18899117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               258, 67
               

               Conread position:
               191-525
               

               Cow position:
               chr5:52000024-52000362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 188
               

               Conread position:
               191-525
               

               Cow position:
               chr5:72007047-72006721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               242, 81
               

               Conread position:
               191-527
               

               Cow position:
               chr5:37645879-37646227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 171
               

               Conread position:
               191-527
               

               Cow position:
               chr5:58855909-58856248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               116, 72
               

               Conread position:
               191-528
               

               Cow position:
               chr5:4280269-4280595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               230, 72
               

               Conread position:
               191-528
               

               Cow position:
               chr5:27306124-27306450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               66, 123
               

               Conread position:
               191-528
               

               Cow position:
               chr5:27615321-27615660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               112, 72
               

               Conread position:
               191-528
               

               Cow position:
               chr5:32378675-32378974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               191-528
               

               Cow position:
               chr5:44752505-44752160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               198, 70
               

               Conread position:
               191-528
               

               Cow position:
               chr5:55176692-55177032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 231
               

               Conread position:
               191-528
               

               Cow position:
               chr5:55967077-55966736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 185
               

               Conread position:
               191-528
               

               Cow position:
               chr5:60715549-60715221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               101, 64
               

               Conread position:
               191-528
               

               Cow position:
               chr5:61725775-61726112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               192-325
               

               Cow position:
               chr5:61455561-61455698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               192-333
               

               Cow position:
               chr5:6033045-6033187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               192-333
               

               Cow position:
               chr5:32087914-32087767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               192-336
               

               Cow position:
               chr5:2851120-2851268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               80, 124
               

               Conread position:
               192-337
               

               Cow position:
               chr5:33537697-33537840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               80, 62
               

               Conread position:
               192-337
               

               Cow position:
               chr5:66297045-66297189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               192-340
               

               Cow position:
               chr5:66280985-66280837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               192-342
               

               Cow position:
               chr5:24642915-24642770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               192-349
               

               Cow position:
               chr5:54530789-54530947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               80, 118
               

               Conread position:
               192-349
               

               Cow position:
               chr5:59298152-59297996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               106, 130
               

               Conread position:
               192-350
               

               Cow position:
               chr5:38853166-38853330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               192-352
               

               Cow position:
               chr5:63917604-63917444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               192-353
               

               Cow position:
               chr5:44054231-44054068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               80, 94
               

               Conread position:
               192-357
               

               Cow position:
               chr5:12672220-12672059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               82, 45
               

               Conread position:
               192-357
               

               Cow position:
               chr5:37366704-37366872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               192-358
               

               Cow position:
               chr5:69099335-69099504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               192-365
               

               Cow position:
               chr5:10789871-10789698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 130
               

               Conread position:
               192-365
               

               Cow position:
               chr5:58005050-58005230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               80, 127
               

               Conread position:
               192-367
               

               Cow position:
               chr5:14630104-14629923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               192-370
               

               Cow position:
               chr5:50950360-50950538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               192-373
               

               Cow position:
               chr5:44583312-44583141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               192-373
               

               Cow position:
               chr5:61600219-61600407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               192-374
               

               Cow position:
               chr5:3492008-3492183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               103, 54
               

               Conread position:
               192-374
               

               Cow position:
               chr5:30816522-30816707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 94
               

               Conread position:
               192-374
               

               Cow position:
               chr5:33661661-33661845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               83, 117
               

               Conread position:
               192-374
               

               Cow position:
               chr5:35145159-35145338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               175, 73
               

               Conread position:
               192-374
               

               Cow position:
               chr5:45036828-45037009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               192-374
               

               Cow position:
               chr5:57271458-57271277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               192-379
               

               Cow position:
               chr5:60519973-60520155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               192-380
               

               Cow position:
               chr5:57327596-57327791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               192-382
               

               Cow position:
               chr5:65933121-65932931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               192-383
               

               Cow position:
               chr5:43395331-43395143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               103, 28
               

               Conread position:
               192-386
               

               Cow position:
               chr5:22102506-22102301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               110, 162
               

               Conread position:
               192-389
               

               Cow position:
               chr5:21524971-21525174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               192-389
               

               Cow position:
               chr5:55821173-55821378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               192-404
               

               Cow position:
               chr5:39094360-39094573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               61, 50
               

               Conread position:
               192-407
               

               Cow position:
               chr5:42747964-42748176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               102, 5
               

               Conread position:
               192-409
               

               Cow position:
               chr5:14420538-14420320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               77, 135
               

               Conread position:
               192-409
               

               Cow position:
               chr5:64844311-64844099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               106, 52
               

               Conread position:
               192-412
               

               Cow position:
               chr5:41303284-41303063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               87, 116
               

               Conread position:
               192-412
               

               Cow position:
               chr5:64392961-64393179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               89, 187
               

               Conread position:
               192-413
               

               Cow position:
               chr5:23140766-23140557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               106, 42
               

               Conread position:
               192-414
               

               Cow position:
               chr5:72150058-72150275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               188, 56
               

               Conread position:
               192-415
               

               Cow position:
               chr5:62870230-62870016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               80, 60
               

               Conread position:
               192-418
               

               Cow position:
               chr5:56135162-56134935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               103, 69
               

               Conread position:
               192-421
               

               Cow position:
               chr5:694393-694607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               80, 43
               

               Conread position:
               192-421
               

               Cow position:
               chr5:16184896-16185120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               192-421
               

               Cow position:
               chr5:43474654-43474877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               192-421
               

               Cow position:
               chr5:51357697-51357469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               80, 189
               

               Conread position:
               192-422
               

               Cow position:
               chr5:34288663-34288435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 35
               

               Conread position:
               192-423
               

               Cow position:
               chr5:9859912-9859678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               67, 134
               

               Conread position:
               192-424
               

               Cow position:
               chr5:49558974-49559216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               58, 76
               

               Conread position:
               192-428
               

               Cow position:
               chr5:8994759-8994526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               192-428
               

               Cow position:
               chr5:30639046-30638824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               103, 41
               

               Conread position:
               192-428
               

               Cow position:
               chr5:51490947-51490725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               109, 16
               

               Conread position:
               192-428
               

               Cow position:
               chr5:54064586-54064815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 75
               

               Conread position:
               192-431
               

               Cow position:
               chr5:50483055-50482824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               84, 66
               

               Conread position:
               192-433
               

               Cow position:
               chr5:6086755-6086516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 187
               

               Conread position:
               192-434
               

               Cow position:
               chr5:16508902-16509145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               73, 24
               

               Conread position:
               192-434
               

               Cow position:
               chr5:21944188-21944443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               53, 193
               

               Conread position:
               192-434
               

               Cow position:
               chr5:47888908-47888666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               80, 171
               

               Conread position:
               192-436
               

               Cow position:
               chr5:24485619-24485387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               176, 45
               

               Conread position:
               192-436
               

               Cow position:
               chr5:28456605-28456360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 184
               

               Conread position:
               192-436
               

               Cow position:
               chr5:28459907-28459661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 185
               

               Conread position:
               192-436
               

               Cow position:
               chr5:40039964-40039721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               192-436
               

               Cow position:
               chr5:75437090-75436839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               81, 193
               

               Conread position:
               192-437
               

               Cow position:
               chr5:32394407-32394647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 75
               

               Conread position:
               192-437
               

               Cow position:
               chr5:61839993-61840236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 59
               

               Conread position:
               192-438
               

               Cow position:
               chr5:741140-740890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               192-438
               

               Cow position:
               chr5:3242667-3242428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 43
               

               Conread position:
               192-438
               

               Cow position:
               chr5:3281065-3280823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               192-438
               

               Cow position:
               chr5:4797504-4797274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               192-438
               

               Cow position:
               chr5:14904266-14904020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 5
               

               Conread position:
               192-438
               

               Cow position:
               chr5:27419914-27419680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               75, 69
               

               Conread position:
               192-438
               

               Cow position:
               chr5:28926381-28926131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               80, 180
               

               Conread position:
               192-440
               

               Cow position:
               chr5:59443445-59443201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               80, 149
               

               Conread position:
               192-443
               

               Cow position:
               chr5:1027885-1027640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               106, 37
               

               Conread position:
               192-444
               

               Cow position:
               chr5:5938131-5938377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               108, 63
               

               Conread position:
               192-444
               

               Cow position:
               chr5:60126180-60126430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 44
               

               Conread position:
               192-445
               

               Cow position:
               chr5:27403437-27403173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               39, 184
               

               Conread position:
               192-445
               

               Cow position:
               chr5:63964366-63964113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               77, 167
               

               Conread position:
               192-445
               

               Cow position:
               chr5:65887208-65886954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 185
               

               Conread position:
               192-446
               

               Cow position:
               chr5:14550779-14550527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               83, 189
               

               Conread position:
               192-446
               

               Cow position:
               chr5:20127861-20128109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               192-446
               

               Cow position:
               chr5:42667582-42667330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               192-446
               

               Cow position:
               chr5:64137058-64137313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               109, 73
               

               Conread position:
               192-446
               

               Cow position:
               chr5:68871999-68872252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               71, 15
               

               Conread position:
               192-447
               

               Cow position:
               chr5:360140-359881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               192-447
               

               Cow position:
               chr5:9390342-9390611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               80, 118
               

               Conread position:
               192-447
               

               Cow position:
               chr5:11427435-11427175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               80, 181
               

               Conread position:
               192-447
               

               Cow position:
               chr5:12149352-12149604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               206, 60
               

               Conread position:
               192-447
               

               Cow position:
               chr5:13691768-13691509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               83, 179
               

               Conread position:
               192-447
               

               Cow position:
               chr5:20554943-20554696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               83, 117
               

               Conread position:
               192-447
               

               Cow position:
               chr5:24348918-24349165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               105, 59
               

               Conread position:
               192-447
               

               Cow position:
               chr5:31480961-31481206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               106, 44
               

               Conread position:
               192-447
               

               Cow position:
               chr5:32140900-32140650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               192-447
               

               Cow position:
               chr5:32153509-32153261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               192-447
               

               Cow position:
               chr5:33414601-33414350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               109, 27
               

               Conread position:
               192-447
               

               Cow position:
               chr5:34049916-34050176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               82, 190
               

               Conread position:
               192-447
               

               Cow position:
               chr5:34506119-34505868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               61, 76
               

               Conread position:
               192-447
               

               Cow position:
               chr5:45170169-45170417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 116
               

               Conread position:
               192-447
               

               Cow position:
               chr5:45409132-45409381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               16, 64
               

               Conread position:
               192-447
               

               Cow position:
               chr5:47317163-47316916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               192-447
               

               Cow position:
               chr5:47871244-47870983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               80, 202
               

               Conread position:
               192-447
               

               Cow position:
               chr5:50722857-50723104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               192-447
               

               Cow position:
               chr5:56820453-56820203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               175, 21
               

               Conread position:
               192-447
               

               Cow position:
               chr5:61576346-61576603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 58
               

               Conread position:
               192-447
               

               Cow position:
               chr5:65601267-65601515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               75, 81
               

               Conread position:
               192-447
               

               Cow position:
               chr5:68265157-68264900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 117
               

               Conread position:
               192-447
               

               Cow position:
               chr5:70050559-70050799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               83, 93
               

               Conread position:
               192-451
               

               Cow position:
               chr5:17063287-17063023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               192-451
               

               Cow position:
               chr5:59759192-59759436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               202, 114
               

               Conread position:
               192-452
               

               Cow position:
               chr5:34115469-34115715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               179, 42
               

               Conread position:
               192-457
               

               Cow position:
               chr5:56433605-56433869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               58, 219
               

               Conread position:
               192-457
               

               Cow position:
               chr5:62826947-62826682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 73
               

               Conread position:
               192-458
               

               Cow position:
               chr5:3281638-3281903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               83, 117
               

               Conread position:
               192-464
               

               Cow position:
               chr5:54405089-54404816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               79, 188
               

               Conread position:
               192-479
               

               Cow position:
               chr5:30487051-30487330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               192-487
               

               Cow position:
               chr5:43738145-43737857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               175, 69
               

               Conread position:
               192-499
               

               Cow position:
               chr5:20407860-20407560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               261, 69
               

               Conread position:
               192-500
               

               Cow position:
               chr5:32697006-32696704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               257, 42
               

               Conread position:
               192-502
               

               Cow position:
               chr5:58793808-58793486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 196
               

               Conread position:
               192-503
               

               Cow position:
               chr5:65588514-65588821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               240, 56
               

               Conread position:
               192-508
               

               Cow position:
               chr5:42744600-42744907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               265, 33
               

               Conread position:
               192-508
               

               Cow position:
               chr5:64139369-64139687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 170
               

               Conread position:
               192-511
               

               Cow position:
               chr5:15598427-15598108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 158
               

               Conread position:
               192-511
               

               Cow position:
               chr5:56518403-56518092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               247, 78
               

               Conread position:
               192-512
               

               Cow position:
               chr5:47756575-47756902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               77, 143
               

               Conread position:
               192-513
               

               Cow position:
               chr5:34300733-34301048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 38
               

               Conread position:
               192-514
               

               Cow position:
               chr5:44848210-44847888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               122, 45
               

               Conread position:
               192-514
               

               Cow position:
               chr5:53835521-53835849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               192-514
               

               Cow position:
               chr5:56467507-56467822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               25, 63
               

               Conread position:
               192-514
               

               Cow position:
               chr5:63992356-63992039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               257, 69
               

               Conread position:
               192-515
               

               Cow position:
               chr5:27154829-27155139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               192-517
               

               Cow position:
               chr5:57935307-57934972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 184
               

               Conread position:
               192-517
               

               Cow position:
               chr5:62142477-62142812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 63
               

               Conread position:
               192-518
               

               Cow position:
               chr5:37814430-37814763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               81, 55
               

               Conread position:
               192-519
               

               Cow position:
               chr5:1247083-1247401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               185, 73
               

               Conread position:
               192-520
               

               Cow position:
               chr5:8821205-8820874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 125
               

               Conread position:
               192-520
               

               Cow position:
               chr5:18573977-18574312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               117, 69
               

               Conread position:
               192-520
               

               Cow position:
               chr5:25231206-25230880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               32, 137
               

               Conread position:
               192-520
               

               Cow position:
               chr5:26467426-26467767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               192-520
               

               Cow position:
               chr5:27102981-27102655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               257, 57
               

               Conread position:
               192-520
               

               Cow position:
               chr5:32975745-32975421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               110, 80
               

               Conread position:
               192-520
               

               Cow position:
               chr5:58144797-58144479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               103, 69
               

               Conread position:
               192-520
               

               Cow position:
               chr5:64823506-64823191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 139
               

               Conread position:
               192-521
               

               Cow position:
               chr5:21828671-21829007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 71
               

               Conread position:
               192-521
               

               Cow position:
               chr5:37190292-37189957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               77, 195
               

               Conread position:
               192-521
               

               Cow position:
               chr5:38832926-38833261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 81
               

               Conread position:
               192-524
               

               Cow position:
               chr5:3771653-3771989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               105, 63
               

               Conread position:
               192-524
               

               Cow position:
               chr5:5111270-5110926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 193
               

               Conread position:
               192-524
               

               Cow position:
               chr5:5257490-5257145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               57, 104
               

               Conread position:
               192-524
               

               Cow position:
               chr5:9894319-9893981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 31
               

               Conread position:
               192-524
               

               Cow position:
               chr5:14314328-14314672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               192-524
               

               Cow position:
               chr5:15478920-15479268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 69
               

               Conread position:
               192-524
               

               Cow position:
               chr5:34528368-34528689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               58, 76
               

               Conread position:
               192-524
               

               Cow position:
               chr5:42064009-42064348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               110, 45
               

               Conread position:
               192-524
               

               Cow position:
               chr5:55756633-55756272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               53, 217
               

               Conread position:
               192-524
               

               Cow position:
               chr5:56523980-56524317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               192-524
               

               Cow position:
               chr5:72903421-72903093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               192-525
               

               Cow position:
               chr5:15722248-15721930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               259, 40
               

               Conread position:
               192-525
               

               Cow position:
               chr5:29771321-29771672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               80, 116
               

               Conread position:
               192-525
               

               Cow position:
               chr5:59326022-59325697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               110, 63
               

               Conread position:
               192-526
               

               Cow position:
               chr5:6045094-6045441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               192-526
               

               Cow position:
               chr5:20783431-20783766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               247, 75
               

               Conread position:
               192-526
               

               Cow position:
               chr5:28302933-28302598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               192-526
               

               Cow position:
               chr5:30302702-30303036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 75
               

               Conread position:
               192-526
               

               Cow position:
               chr5:37646744-37646399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 100
               

               Conread position:
               192-526
               

               Cow position:
               chr5:43929927-43929591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 79
               

               Conread position:
               192-526
               

               Cow position:
               chr5:50533576-50533243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 55
               

               Conread position:
               192-526
               

               Cow position:
               chr5:50943347-50943011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               80, 199
               

               Conread position:
               192-526
               

               Cow position:
               chr5:57736921-57737244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               262, 59
               

               Conread position:
               192-527
               

               Cow position:
               chr5:16025654-16025323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               80, 151
               

               Conread position:
               192-527
               

               Cow position:
               chr5:41546087-41545747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               192-527
               

               Cow position:
               chr5:54350554-54350215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 58
               

               Conread position:
               192-527
               

               Cow position:
               chr5:56028724-56028395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 154
               

               Conread position:
               192-527
               

               Cow position:
               chr5:64758957-64758623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               103, 41
               

               Conread position:
               192-527
               

               Cow position:
               chr5:72564568-72564910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 80
               

               Conread position:
               192-528
               

               Cow position:
               chr5:2309757-2309411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               80, 169
               

               Conread position:
               192-528
               

               Cow position:
               chr5:4166478-4166787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               265, 47
               

               Conread position:
               192-528
               

               Cow position:
               chr5:11229867-11229526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 189
               

               Conread position:
               192-528
               

               Cow position:
               chr5:12322994-12322658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 82
               

               Conread position:
               192-528
               

               Cow position:
               chr5:12709692-12710013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               75, 81
               

               Conread position:
               192-528
               

               Cow position:
               chr5:16893969-16893625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 130
               

               Conread position:
               192-528
               

               Cow position:
               chr5:17087222-17086873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               80, 170
               

               Conread position:
               192-528
               

               Cow position:
               chr5:17999688-17999349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               103, 75
               

               Conread position:
               192-528
               

               Cow position:
               chr5:20779575-20779252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               240, 59
               

               Conread position:
               192-528
               

               Cow position:
               chr5:23169012-23168679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 53
               

               Conread position:
               192-528
               

               Cow position:
               chr5:26094363-26094019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               103, 155
               

               Conread position:
               192-528
               

               Cow position:
               chr5:26377860-26377521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 44
               

               Conread position:
               192-528
               

               Cow position:
               chr5:29353323-29352981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               192-528
               

               Cow position:
               chr5:29827860-29828193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               237, 56
               

               Conread position:
               192-528
               

               Cow position:
               chr5:29860125-29860478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               258
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               24, 264
               

               Conread position:
               192-528
               

               Cow position:
               chr5:30276498-30276837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 182
               

               Conread position:
               192-528
               

               Cow position:
               chr5:32339169-32338819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               252
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               70, 158
               

               Conread position:
               192-528
               

               Cow position:
               chr5:35684741-35685084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 139
               

               Conread position:
               192-528
               

               Cow position:
               chr5:35826397-35826748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 179
               

               Conread position:
               192-528
               

               Cow position:
               chr5:35969349-35969679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               245
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               73, 81
               

               Conread position:
               192-528
               

               Cow position:
               chr5:36855019-36855353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               112, 48
               

               Conread position:
               192-528
               

               Cow position:
               chr5:36868552-36868882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               192-528
               

               Cow position:
               chr5:37377682-37378001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               240, 45
               

               Conread position:
               192-528
               

               Cow position:
               chr5:39447724-39447385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               59, 83
               

               Conread position:
               192-528
               

               Cow position:
               chr5:40109308-40109639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               259, 32
               

               Conread position:
               192-528
               

               Cow position:
               chr5:40357063-40356711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               192-528
               

               Cow position:
               chr5:40595195-40594883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               80, 42
               

               Conread position:
               192-528
               

               Cow position:
               chr5:41164895-41165235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 81
               

               Conread position:
               192-528
               

               Cow position:
               chr5:42845794-42845444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               100, 58
               

               Conread position:
               192-528
               

               Cow position:
               chr5:43858621-43858273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               192-528
               

               Cow position:
               chr5:44447080-44446718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 202
               

               Conread position:
               192-528
               

               Cow position:
               chr5:44796912-44796586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               106, 42
               

               Conread position:
               192-528
               

               Cow position:
               chr5:44994231-44993902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 73
               

               Conread position:
               192-528
               

               Cow position:
               chr5:45226017-45225669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               103, 25
               

               Conread position:
               192-528
               

               Cow position:
               chr5:45845889-45845541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 152
               

               Conread position:
               192-528
               

               Cow position:
               chr5:46323005-46322656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               82, 94
               

               Conread position:
               192-528
               

               Cow position:
               chr5:46510060-46509717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 119
               

               Conread position:
               192-528
               

               Cow position:
               chr5:47601623-47601959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 46
               

               Conread position:
               192-528
               

               Cow position:
               chr5:49685474-49685130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               46, 91
               

               Conread position:
               192-528
               

               Cow position:
               chr5:51053841-51053502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               208, 69
               

               Conread position:
               192-528
               

               Cow position:
               chr5:54086342-54086685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               73, 193
               

               Conread position:
               192-528
               

               Cow position:
               chr5:54311140-54311483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               103, 15
               

               Conread position:
               192-528
               

               Cow position:
               chr5:55942591-55942232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               255
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               83, 67
               

               Conread position:
               192-528
               

               Cow position:
               chr5:62172225-62172557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 73
               

               Conread position:
               192-528
               

               Cow position:
               chr5:63987641-63987298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               192-528
               

               Cow position:
               chr5:65941447-65941104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 155
               

               Conread position:
               192-528
               

               Cow position:
               chr5:66257449-66257785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 15
               

               Conread position:
               192-528
               

               Cow position:
               chr5:66338890-66339222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               202, 37
               

               Conread position:
               192-528
               

               Cow position:
               chr5:67212185-67212507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               189, 60
               

               Conread position:
               192-528
               

               Cow position:
               chr5:74643855-74643531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 40
               

               Conread position:
               193-343
               

               Cow position:
               chr5:14415580-14415736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               193-352
               

               Cow position:
               chr5:50870349-50870512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               193-374
               

               Cow position:
               chr5:32963822-32963643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               60, 81
               

               Conread position:
               193-438
               

               Cow position:
               chr5:7140297-7140057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               102, 63
               

               Conread position:
               193-438
               

               Cow position:
               chr5:53855511-53855749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               103, 43
               

               Conread position:
               193-438
               

               Cow position:
               chr5:66815768-66815522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               81, 37
               

               Conread position:
               193-456
               

               Cow position:
               chr5:1766536-1766283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               193-513
               

               Cow position:
               chr5:15426333-15426670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 237
               

               Conread position:
               193-514
               

               Cow position:
               chr5:29903714-29903390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 19
               

               Conread position:
               193-517
               

               Cow position:
               chr5:4218685-4218993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 44
               

               Conread position:
               193-526
               

               Cow position:
               chr5:26990201-26990533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               193-526
               

               Cow position:
               chr5:65752664-65753006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 74
               

               Conread position:
               193-527
               

               Cow position:
               chr5:15363698-15364028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               82, 145
               

               Conread position:
               193-528
               

               Cow position:
               chr5:28324153-28324482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               36, 219
               

               Conread position:
               193-528
               

               Cow position:
               chr5:67243733-67244065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 138
               

               Conread position:
               193-528
               

               Cow position:
               chr5:74015747-74016087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               45, 84
               

               Conread position:
               194-357
               

               Cow position:
               chr5:63388603-63388765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               78, 113
               

               Conread position:
               194-402
               

               Cow position:
               chr5:4507152-4506939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               75, 181
               

               Conread position:
               194-427
               

               Cow position:
               chr5:72310523-72310741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               194-431
               

               Cow position:
               chr5:34915950-34916173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               194-438
               

               Cow position:
               chr5:33080980-33080743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               78, 40
               

               Conread position:
               194-442
               

               Cow position:
               chr5:50637638-50637878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               89, 70
               

               Conread position:
               194-443
               

               Cow position:
               chr5:18090536-18090792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               107, 41
               

               Conread position:
               194-446
               

               Cow position:
               chr5:35235900-35235652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               101, 70
               

               Conread position:
               194-447
               

               Cow position:
               chr5:2500380-2500121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               194-447
               

               Cow position:
               chr5:59082387-59082136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               81, 115
               

               Conread position:
               194-456
               

               Cow position:
               chr5:41522987-41522736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               138, 67
               

               Conread position:
               194-464
               

               Cow position:
               chr5:28247985-28248246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               104, 121
               

               Conread position:
               194-511
               

               Cow position:
               chr5:28927784-28927464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 265
               

               Conread position:
               194-514
               

               Cow position:
               chr5:45803869-45804193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               77, 49
               

               Conread position:
               194-519
               

               Cow position:
               chr5:21617264-21617596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 57
               

               Conread position:
               194-525
               

               Cow position:
               chr5:26262865-26262535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               194-525
               

               Cow position:
               chr5:43923341-43923019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               78, 122
               

               Conread position:
               194-526
               

               Cow position:
               chr5:21040165-21039839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               57, 44
               

               Conread position:
               194-526
               

               Cow position:
               chr5:22242977-22242620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 158
               

               Conread position:
               194-528
               

               Cow position:
               chr5:458290-458635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               79, 53
               

               Conread position:
               194-528
               

               Cow position:
               chr5:4032180-4031839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               104, 36
               

               Conread position:
               194-528
               

               Cow position:
               chr5:9090215-9089881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 165
               

               Conread position:
               194-528
               

               Cow position:
               chr5:11668370-11668038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               99, 56
               

               Conread position:
               194-528
               

               Cow position:
               chr5:31640236-31640570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 105
               

               Conread position:
               194-528
               

               Cow position:
               chr5:67932653-67932323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               228, 36
               

               Conread position:
               194-528
               

               Cow position:
               chr5:69337636-69337967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 137
               

               Conread position:
               194-528
               

               Cow position:
               chr5:74858382-74858722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               177, 68
               

               Conread position:
               195-339
               

               Cow position:
               chr5:31434075-31434218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               195-363
               

               Cow position:
               chr5:57706725-57706897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               195-370
               

               Cow position:
               chr5:5848377-5848205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               145, 47
               

               Conread position:
               195-374
               

               Cow position:
               chr5:51151553-51151370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               43, 38
               

               Conread position:
               195-388
               

               Cow position:
               chr5:71158454-71158259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               195-418
               

               Cow position:
               chr5:47313283-47313503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 38
               

               Conread position:
               195-437
               

               Cow position:
               chr5:26790642-26790407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 55
               

               Conread position:
               195-441
               

               Cow position:
               chr5:42777574-42777817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               101, 77
               

               Conread position:
               195-447
               

               Cow position:
               chr5:4322220-4322462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 114
               

               Conread position:
               195-520
               

               Cow position:
               chr5:7723480-7723804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 63
               

               Conread position:
               195-524
               

               Cow position:
               chr5:69461144-69461478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 53
               

               Conread position:
               195-528
               

               Cow position:
               chr5:4220790-4221124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 182
               

               Conread position:
               195-528
               

               Cow position:
               chr5:30844920-30845255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 52
               

               Conread position:
               195-528
               

               Cow position:
               chr5:35208071-35208408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               70, 107
               

               Conread position:
               195-528
               

               Cow position:
               chr5:52165373-52165032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 193
               

               Conread position:
               195-528
               

               Cow position:
               chr5:64176311-64175979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 170
               

               Conread position:
               195-528
               

               Cow position:
               chr5:65776576-65776237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               81, 177
               

               Conread position:
               196-360
               

               Cow position:
               chr5:57591501-57591667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               79, 113
               

               Conread position:
               196-428
               

               Cow position:
               chr5:20344967-20345201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 137
               

               Conread position:
               196-432
               

               Cow position:
               chr5:37064904-37065135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               73, 108
               

               Conread position:
               196-447
               

               Cow position:
               chr5:34638696-34638942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 59
               

               Conread position:
               196-447
               

               Cow position:
               chr5:47704323-47704068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               79, 181
               

               Conread position:
               196-447
               

               Cow position:
               chr5:66403954-66404192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               79, 41
               

               Conread position:
               196-508
               

               Cow position:
               chr5:48010036-48009732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 71
               

               Conread position:
               196-514
               

               Cow position:
               chr5:8024382-8024067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               171, 74
               

               Conread position:
               196-515
               

               Cow position:
               chr5:7755742-7755437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               257, 38
               

               Conread position:
               196-517
               

               Cow position:
               chr5:6528491-6528821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               67, 189
               

               Conread position:
               196-527
               

               Cow position:
               chr5:46104125-46103817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               196-528
               

               Cow position:
               chr5:39936913-39937262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               105, 65
               

               Conread position:
               197-368
               

               Cow position:
               chr5:31469773-31469600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 76
               

               Conread position:
               197-446
               

               Cow position:
               chr5:46122539-46122296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 38
               

               Conread position:
               197-528
               

               Cow position:
               chr5:7044899-7044558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 190
               

               Conread position:
               197-528
               

               Cow position:
               chr5:56070664-56071007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 190
               

               Conread position:
               198-438
               

               Cow position:
               chr5:49362179-49361943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               74, 125
               

               Conread position:
               198-447
               

               Cow position:
               chr5:54713924-54713673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               106, 67
               

               Conread position:
               199-354
               

               Cow position:
               chr5:75828922-75828770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 73
               

               Conread position:
               199-427
               

               Cow position:
               chr5:17644842-17644616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               102, 68
               

               Conread position:
               199-445
               

               Cow position:
               chr5:3627340-3627096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 11
               

               Conread position:
               199-511
               

               Cow position:
               chr5:19813400-19813090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               202-451
               

               Cow position:
               chr5:6670381-6670131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 134
               

               Conread position:
               202-511
               

               Cow position:
               chr5:64321565-64321879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 111
               

               Conread position:
               202-520
               

               Cow position:
               chr5:24996409-24996084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 40
               

               Conread position:
               202-525
               

               Cow position:
               chr5:3639666-3639353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 54
               

               Conread position:
               202-525
               

               Cow position:
               chr5:6286610-6286289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               202-527
               

               Cow position:
               chr5:37808848-37808517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               174, 53
               

               Conread position:
               202-528
               

               Cow position:
               chr5:61810609-61810918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               228, 38
               

               Conread position:
               206-447
               

               Cow position:
               chr5:64524060-64523805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               78, 166
               

               Conread position:
               207-364
               

               Cow position:
               chr5:57576035-57576196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               66, 35
               

               Conread position:
               207-366
               

               Cow position:
               chr5:54111740-54111902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               207-429
               

               Cow position:
               chr5:50975707-50975942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               207-447
               

               Cow position:
               chr5:34977018-34976784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               126, 66
               

               Conread position:
               207-457
               

               Cow position:
               chr5:3668719-3668967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 38
               

               Conread position:
               207-517
               

               Cow position:
               chr5:57575587-57575909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 180
               

               Conread position:
               207-526
               

               Cow position:
               chr5:47323272-47323607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               68, 183
               

               Conread position:
               207-527
               

               Cow position:
               chr5:30253563-30253887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 66
               

               Conread position:
               207-527
               

               Cow position:
               chr5:41713131-41713444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               38, 30
               

               Conread position:
               207-527
               

               Cow position:
               chr5:44028480-44028163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 41
               

               Conread position:
               207-528
               

               Cow position:
               chr5:39258355-39258653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 41
               

               Conread position:
               207-528
               

               Cow position:
               chr5:46512945-46512622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 164
               

               Conread position:
               208-368
               

               Cow position:
               chr5:48178856-48178696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 35
               

               Conread position:
               208-438
               

               Cow position:
               chr5:10261416-10261184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               67, 94
               

               Conread position:
               208-447
               

               Cow position:
               chr5:28957794-28957556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               55, 149
               

               Conread position:
               208-521
               

               Cow position:
               chr5:57074512-57074191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 141
               

               Conread position:
               209-413
               

               Cow position:
               chr5:53146063-53145859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               64, 95
               

               Conread position:
               209-431
               

               Cow position:
               chr5:40152299-40152521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               86, 162
               

               Conread position:
               209-447
               

               Cow position:
               chr5:41531264-41531027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               29, 25
               

               Conread position:
               209-447
               

               Cow position:
               chr5:51935006-51935248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               67, 176
               

               Conread position:
               209-447
               

               Cow position:
               chr5:55928766-55929002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               58, 64
               

               Conread position:
               209-466
               

               Cow position:
               chr5:59354550-59354289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               47, 153
               

               Conread position:
               210-435
               

               Cow position:
               chr5:19778759-19778532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               69, 185
               

               Conread position:
               210-437
               

               Cow position:
               chr5:43816786-43816555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               210-446
               

               Cow position:
               chr5:69520715-69520948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               210-447
               

               Cow position:
               chr5:45472090-45472340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 57
               

               Conread position:
               210-523
               

               Cow position:
               chr5:62638730-62639046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               211-355
               

               Cow position:
               chr5:45026092-45025949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               84, 50
               

               Conread position:
               211-457
               

               Cow position:
               chr5:52667853-52668098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               211-466
               

               Cow position:
               chr5:34167786-34168041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               112, 50
               

               Conread position:
               211-471
               

               Cow position:
               chr5:29980160-29979899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               62, 51
               

               Conread position:
               211-525
               

               Cow position:
               chr5:28224278-28224596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               211-528
               

               Cow position:
               chr5:50599879-50600195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               66, 143
               

               Conread position:
               211-528
               

               Cow position:
               chr5:56877311-56877629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               212-352
               

               Cow position:
               chr5:33937046-33937186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               213-511
               

               Cow position:
               chr5:21964119-21964399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               88, 35
               

               Conread position:
               213-520
               

               Cow position:
               chr5:41452839-41452533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               61, 93
               

               Conread position:
               213-528
               

               Cow position:
               chr5:59115208-59115526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               91, 168
               

               Conread position:
               215-447
               

               Cow position:
               chr5:30178681-30178446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               21, 29
               

               Conread position:
               215-526
               

               Cow position:
               chr5:55955735-55956057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               58, 81
               

               Conread position:
               215-528
               

               Cow position:
               chr5:43992150-43992471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 45
               

               Conread position:
               215-528
               

               Cow position:
               chr5:56014564-56014879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               236, 48
               

               Conread position:
               216-368
               

               Cow position:
               chr5:61875347-61875202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               216-435
               

               Cow position:
               chr5:27015511-27015726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 137
               

               Conread position:
               216-524
               

               Cow position:
               chr5:12866998-12866685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 170
               

               Conread position:
               216-528
               

               Cow position:
               chr5:41010166-41009865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 117
               

               Conread position:
               216-528
               

               Cow position:
               chr5:56317125-56317436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 99
               

               Conread position:
               217-413
               

               Cow position:
               chr5:41486906-41486713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               217-447
               

               Cow position:
               chr5:64697612-64697844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 72
               

               Conread position:
               218-524
               

               Cow position:
               chr5:30950087-30949772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               219-520
               

               Cow position:
               chr5:27411562-27411262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 100
               

               Conread position:
               219-528
               

               Cow position:
               chr5:30629324-30629010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               220-518
               

               Cow position:
               chr5:65967897-65967594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               53, 126
               

               Conread position:
               220-521
               

               Cow position:
               chr5:74580627-74580929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               53, 104
               

               Conread position:
               220-525
               

               Cow position:
               chr5:66972257-66972573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               13, 168
               

               Conread position:
               221-520
               

               Cow position:
               chr5:14629980-14629666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               222-528
               

               Cow position:
               chr5:54060110-54060423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               223-504
               

               Cow position:
               chr5:21920205-21920494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               50, 226
               

               Conread position:
               223-520
               

               Cow position:
               chr5:55068543-55068845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               225-528
               

               Cow position:
               chr5:45397418-45397716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 40
               

               Conread position:
               225-528
               

               Cow position:
               chr5:46426011-46425707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               227-447
               

               Cow position:
               chr5:17768305-17768092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               44, 61
               

               Conread position:
               227-528
               

               Cow position:
               chr5:3582414-3582708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               228-504
               

               Cow position:
               chr5:44673526-44673813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               43, 222
               

               Conread position:
               228-514
               

               Cow position:
               chr5:50821621-50821916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 151
               

               Conread position:
               229-528
               

               Cow position:
               chr5:42050391-42050700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               46, 121
               

               Conread position:
               230-520
               

               Cow position:
               chr5:16214527-16214826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               230-528
               

               Cow position:
               chr5:47696598-47696303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               144, 111
               

               Conread position:
               230-528
               

               Cow position:
               chr5:55232948-55232666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               218, 35
               

               Conread position:
               235-438
               

               Cow position:
               chr5:51801124-51800923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               61, 142
               

               Conread position:
               235-525
               

               Cow position:
               chr5:20422333-20422050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               220, 37
               

               Conread position:
               235-527
               

               Cow position:
               chr5:19278855-19278561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 138
               

               Conread position:
               238-434
               

               Cow position:
               chr5:3549934-3549736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               238-447
               

               Cow position:
               chr5:31144938-31144729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               238-520
               

               Cow position:
               chr5:68718726-68719006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               36, 51
               

               Conread position:
               239-528
               

               Cow position:
               chr5:25495496-25495211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               93, 18
               

               Conread position:
               240-397
               

               Cow position:
               chr5:19078969-19079128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               240-428
               

               Cow position:
               chr5:71579023-71579215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               5, 159
               

               Conread position:
               240-524
               

               Cow position:
               chr5:35247261-35246967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               5, 92
               

               Conread position:
               240-526
               

               Cow position:
               chr5:12351935-12351664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               35, 95
               

               Conread position:
               240-528
               

               Cow position:
               chr5:16206305-16206008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               25, 147
               

               Conread position:
               240-528
               

               Cow position:
               chr5:35459440-35459146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               209, 60
               

               Conread position:
               241-444
               

               Cow position:
               chr5:63865647-63865853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               34, 138
               

               Conread position:
               243-447
               

               Cow position:
               chr5:65883922-65883714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               32, 133
               

               Conread position:
               243-520
               

               Cow position:
               chr5:39874979-39875263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               22, 119
               

               Conread position:
               243-528
               

               Cow position:
               chr5:12673606-12673331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               31, 79
               

               Conread position:
               244-455
               

               Cow position:
               chr5:66581818-66582027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 130
               

               Conread position:
               244-476
               

               Cow position:
               chr5:23866306-23866084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               31, 116
               

               Conread position:
               244-523
               

               Cow position:
               chr5:7057545-7057260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 5
               

               Conread position:
               244-527
               

               Cow position:
               chr5:70952021-70951742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 134
               

               Conread position:
               246-527
               

               Cow position:
               chr5:35763135-35763407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               211, 129
               

               Conread position:
               247-528
               

               Cow position:
               chr5:25035384-25035111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               217
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               248-528
               

               Cow position:
               chr5:64027149-64026872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               25, 126
               

               Conread position:
               249-438
               

               Cow position:
               chr5:67540343-67540152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 104
               

               Conread position:
               249-528
               

               Cow position:
               chr5:57101916-57101636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               251-514
               

               Cow position:
               chr5:72951701-72951977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 123
               

               Conread position:
               252-528
               

               Cow position:
               chr5:66366385-66366662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 21
               

               Conread position:
               253-387
               

               Cow position:
               chr5:19294622-19294487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               253-432
               

               Cow position:
               chr5:7921536-7921361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               20, 122
               

               Conread position:
               253-528
               

               Cow position:
               chr5:45574485-45574767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               132, 17
               

               Conread position:
               254-428
               

               Cow position:
               chr5:38647224-38647394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               23, 128
               

               Conread position:
               255-447
               

               Cow position:
               chr5:991332-991522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               155
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               20, 118
               

               Conread position:
               257-528
               

               Cow position:
               chr5:45273633-45273355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 116
               

               Conread position:
               257-528
               

               Cow position:
               chr5:54768042-54767762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               261-528
               

               Cow position:
               chr5:49474670-49474399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               265-527
               

               Cow position:
               chr5:54375628-54375356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               107, 146
               

               Conread position:
               269-521
               

               Cow position:
               chr5:60016050-60016305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               184, 103
               

               Conread position:
               273-447
               

               Cow position:
               chr5:50799427-50799592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               273-447
               

               Cow position:
               chr5:56680134-56680309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 121
               

               Conread position:
               273-513
               

               Cow position:
               chr5:27172093-27171861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               192, 20
               

               Conread position:
               273-521
               

               Cow position:
               chr5:12901802-12902057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               273-521
               

               Cow position:
               chr5:53710807-53710549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 100
               

               Conread position:
               273-523
               

               Cow position:
               chr5:60747389-60747139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               121, 7
               

               Conread position:
               273-526
               

               Cow position:
               chr5:44726439-44726189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               178, 96
               

               Conread position:
               273-527
               

               Cow position:
               chr5:49440985-49440724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               178, 68
               

               Conread position:
               273-528
               

               Cow position:
               chr5:13717684-13717424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               28, 107
               

               Conread position:
               273-528
               

               Cow position:
               chr5:18289016-18289269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 111
               

               Conread position:
               274-445
               

               Cow position:
               chr5:19523785-19523956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 99
               

               Conread position:
               274-474
               

               Cow position:
               chr5:6891130-6890927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               129, 102
               

               Conread position:
               274-524
               

               Cow position:
               chr5:7697893-7698143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               179, 102
               

               Conread position:
               274-528
               

               Cow position:
               chr5:58446691-58446953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               86, 105
               

               Conread position:
               275-435
               

               Cow position:
               chr5:55849854-55849698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               275-526
               

               Cow position:
               chr5:38076594-38076338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               120, 35
               

               Conread position:
               276-439
               

               Cow position:
               chr5:60448105-60448266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               276-527
               

               Cow position:
               chr5:60183691-60183952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 101
               

               Conread position:
               276-528
               

               Cow position:
               chr5:23678814-23678556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               25, 217
               

               Conread position:
               277-514
               

               Cow position:
               chr5:14921039-14920797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               117, 73
               

               Conread position:
               278-528
               

               Cow position:
               chr5:12434427-12434690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               91, 55
               

               Conread position:
               281-528
               

               Cow position:
               chr5:62378686-62378927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               168, 88
               

               Conread position:
               282-526
               

               Cow position:
               chr5:12557396-12557142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               88, 110
               

               Conread position:
               283-524
               

               Cow position:
               chr5:64592197-64591952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               174, 58
               

               Conread position:
               283-528
               

               Cow position:
               chr5:36039107-36038853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               98, 52
               

               Conread position:
               289-528
               

               Cow position:
               chr5:30232802-30233055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               33, 212
               

               Conread position:
               294-525
               

               Cow position:
               chr5:35976429-35976654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               159, 51
               

               Conread position:
               298-528
               

               Cow position:
               chr5:69636147-69636371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               153, 78
               

               Conread position:
               302-527
               

               Cow position:
               chr5:66551983-66551750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               149, 74
               

               Conread position:
               302-528
               

               Cow position:
               chr5:17555115-17554886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               305-520
               

               Cow position:
               chr5:43402819-43403042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               69, 206
               

               Conread position:
               307-467
               

               Cow position:
               chr5:34923030-34922879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               146, 38
               

               Conread position:
               307-526
               

               Cow position:
               chr5:19752226-19752447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 43
               

               Conread position:
               314-521
               

               Cow position:
               chr5:28035668-28035882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 188
               

               Conread position:
               314-521
               

               Cow position:
               chr5:29912347-29912560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               144, 27
               

               Conread position:
               315-456
               

               Cow position:
               chr5:6439104-6438969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               315-527
               

               Cow position:
               chr5:30805097-30805310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               140, 47
               

               Conread position:
               315-527
               

               Cow position:
               chr5:63234897-63234682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 71
               

               Conread position:
               317-528
               

               Cow position:
               chr5:67118348-67118567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               321-520
               

               Cow position:
               chr5:59627039-59626833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               132, 181
               

               Conread position:
               324-508
               

               Cow position:
               chr5:26150483-26150294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 54
               

               Conread position:
               326-528
               

               Cow position:
               chr5:63059009-63059208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               327-513
               

               Cow position:
               chr5:63627584-63627403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               328-521
               

               Cow position:
               chr5:61455787-61455983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               120, 189
               

               Conread position:
               329-520
               

               Cow position:
               chr5:40241985-40242182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               330-528
               

               Cow position:
               chr5:56339074-56338874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               133, 11
               

               Conread position:
               332-528
               

               Cow position:
               chr5:35982793-35982588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               336-514
               

               Cow position:
               chr5:26851650-26851823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               340-526
               

               Cow position:
               chr5:49501871-49501679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 46
               

               Conread position:
               341-447
               

               Cow position:
               chr5:63192787-63192682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               341-525
               

               Cow position:
               chr5:56517057-56517249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               95, 54
               

               Conread position:
               345-528
               

               Cow position:
               chr5:17602242-17602058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               112, 46
               

               Conread position:
               345-528
               

               Cow position:
               chr5:49342090-49341902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               104, 13
               

               Conread position:
               347-525
               

               Cow position:
               chr5:55796004-55795822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               106, 37
               

               Conread position:
               347-528
               

               Cow position:
               chr5:20288303-20288113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               106, 29
               

               Conread position:
               350-527
               

               Cow position:
               chr5:57686777-57686591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               351-528
               

               Cow position:
               chr5:22795178-22795361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               351-528
               

               Cow position:
               chr5:71724265-71724446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               353-528
               

               Cow position:
               chr5:26549175-26548990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               100, 39
               

               Conread position:
               374-524
               

               Cow position:
               chr5:9234004-9233845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               378-524
               

               Cow position:
               chr5:56334518-56334369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               379-528
               

               Cow position:
               chr5:17104843-17104997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               384-527
               

               Cow position:
               chr5:60523728-60523878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               387-528
               

               Cow position:
               chr5:34915055-34914906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               392-524
               

               Cow position:
               chr5:9170578-9170441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 124
               

               Conread position:
               393-527
               

               Cow position:
               chr5:17605130-17604986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               411-525
               

               Cow position:
               chr5:35190132-35190254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               417-526
               

               Cow position:
               chr5:29148919-29149033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               38, 0
               
Show alignments to all cow chromosomes.
Conread position:	163-445
Cow position:	chr5:74003853-74003578 (view UCSC Genome Browser custom track)
Alignm length:	289
Alignm identity:	206
Alignm E-value:	6e-36
Alignm gaps (pig, cow):	30, 74
Conread position:	168-447
Cow position:	chr5:7552633-7552358 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	182
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	161, 36
Conread position:	181-528
Cow position:	chr5:69731313-69731647 (view UCSC Genome Browser custom track)
Alignm length:	354
Alignm identity:	247
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	93, 55
Conread position:	183-528
Cow position:	chr5:34561806-34562165 (view UCSC Genome Browser custom track)
Alignm length:	361
Alignm identity:	270
Alignm E-value:	0
Alignm gaps (pig, cow):	89, 197
Conread position:	184-433
Cow position:	chr5:46499097-46499342 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	165
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	112, 82
Conread position:	186-448
Cow position:	chr5:74610891-74610640 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	174
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	120, 0
Conread position:	186-528
Cow position:	chr5:43457718-43457384 (view UCSC Genome Browser custom track)
Alignm length:	355
Alignm identity:	247
Alignm E-value:	5e-35
Alignm gaps (pig, cow):	86, 63
Conread position:	188-426
Cow position:	chr5:9234278-9234034 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	168
Alignm E-value:	8e-29
Alignm gaps (pig, cow):	82, 0
Conread position:	188-527
Cow position:	chr5:22643415-22643086 (view UCSC Genome Browser custom track)
Alignm length:	344
Alignm identity:	243
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	79, 85
Conread position:	188-528
Cow position:	chr5:48143988-48143641 (view UCSC Genome Browser custom track)
Alignm length:	352
Alignm identity:	228
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	83, 222
Conread position:	189-336
Cow position:	chr5:14703163-14703016 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	117
Alignm E-value:	6e-26
Alignm gaps (pig, cow):	81, 112
Conread position:	189-354
Cow position:	chr5:63840342-63840176 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	120
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	84, 95
Conread position:	189-365
Cow position:	chr5:29504913-29505088 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	134
Alignm E-value:	8e-29
Alignm gaps (pig, cow):	83, 132
Conread position:	189-374
Cow position:	chr5:6986962-6987151 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	135
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	82, 122
Conread position:	189-375
Cow position:	chr5:33467237-33467053 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	133
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	134, 78
Conread position:	189-394
Cow position:	chr5:17631066-17630869 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	151
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	81, 112
Conread position:	189-437
Cow position:	chr5:71504929-71505176 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	162
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	195, 86
Conread position:	189-438
Cow position:	chr5:72172827-72173076 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	173
Alignm E-value:	6e-26
Alignm gaps (pig, cow):	81, 135
Conread position:	189-446
Cow position:	chr5:63185450-63185197 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	184
Alignm E-value:	8e-28
Alignm gaps (pig, cow):	81, 118
Conread position:	189-447
Cow position:	chr5:28946255-28946002 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	175
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	49, 65