Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rpigcf0_010910.5
        

               Conread position:
               179-528
               

               Cow position:
               chr9:50139542-50139193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               116, 72
               

               Conread position:
               180-524
               

               Cow position:
               chr9:1973202-1972860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               121, 85
               

               Conread position:
               180-528
               

               Cow position:
               chr9:61544909-61544569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               112, 105
               

               Conread position:
               181-447
               

               Cow position:
               chr9:56087810-56088071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               115, 27
               

               Conread position:
               185-428
               

               Cow position:
               chr9:25657769-25657525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               50, 182
               

               Conread position:
               187-528
               

               Cow position:
               chr9:34957798-34958149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 152
               

               Conread position:
               189-351
               

               Cow position:
               chr9:26828570-26828736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               82, 161
               

               Conread position:
               189-363
               

               Cow position:
               chr9:31640067-31640245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               189-365
               

               Cow position:
               chr9:8612538-8612357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               189-372
               

               Cow position:
               chr9:8937399-8937213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               189-374
               

               Cow position:
               chr9:44108579-44108763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 45
               

               Conread position:
               189-393
               

               Cow position:
               chr9:34093174-34093387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               189-394
               

               Cow position:
               chr9:27052082-27052290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               81, 182
               

               Conread position:
               189-413
               

               Cow position:
               chr9:47954974-47955194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               80, 8
               

               Conread position:
               189-414
               

               Cow position:
               chr9:60037907-60037680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               189-415
               

               Cow position:
               chr9:847668-847887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               182, 77
               

               Conread position:
               189-428
               

               Cow position:
               chr9:30189351-30189111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               81, 108
               

               Conread position:
               189-433
               

               Cow position:
               chr9:19637387-19637622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               189-438
               

               Cow position:
               chr9:50295772-50296029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 181
               

               Conread position:
               189-438
               

               Cow position:
               chr9:52787286-52787536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               121, 72
               

               Conread position:
               189-445
               

               Cow position:
               chr9:29108788-29108535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               189-446
               

               Cow position:
               chr9:20839865-20839609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               189-450
               

               Cow position:
               chr9:54924877-54924612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 184
               

               Conread position:
               189-466
               

               Cow position:
               chr9:52724965-52725240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               80, 119
               

               Conread position:
               189-478
               

               Cow position:
               chr9:3594275-3594568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               80, 108
               

               Conread position:
               189-486
               

               Cow position:
               chr9:16086511-16086214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 181
               

               Conread position:
               189-502
               

               Cow position:
               chr9:9823269-9823572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               175, 44
               

               Conread position:
               189-505
               

               Cow position:
               chr9:56253151-56252832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               86, 38
               

               Conread position:
               189-511
               

               Cow position:
               chr9:30020230-30019906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 149
               

               Conread position:
               189-514
               

               Cow position:
               chr9:3932218-3931890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               82, 200
               

               Conread position:
               189-518
               

               Cow position:
               chr9:58204917-58204591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               60, 115
               

               Conread position:
               189-520
               

               Cow position:
               chr9:10666773-10667107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 44
               

               Conread position:
               189-520
               

               Cow position:
               chr9:34310285-34309945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               82, 219
               

               Conread position:
               189-523
               

               Cow position:
               chr9:28983432-28983096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               84, 56
               

               Conread position:
               189-527
               

               Cow position:
               chr9:5433886-5433541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 59
               

               Conread position:
               189-528
               

               Cow position:
               chr9:5393302-5392978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               83, 117
               

               Conread position:
               189-528
               

               Cow position:
               chr9:20091289-20090954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               242, 11
               

               Conread position:
               190-431
               

               Cow position:
               chr9:51005137-51004907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 31
               

               Conread position:
               190-437
               

               Cow position:
               chr9:31587847-31588096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               190-438
               

               Cow position:
               chr9:58669631-58669383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               80, 209
               

               Conread position:
               191-349
               

               Cow position:
               chr9:41958546-41958708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               42, 57
               

               Conread position:
               191-363
               

               Cow position:
               chr9:35101116-35100943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               154, 72
               

               Conread position:
               191-367
               

               Cow position:
               chr9:25502289-25502470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               191-372
               

               Cow position:
               chr9:61846901-61847082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               113, 64
               

               Conread position:
               191-389
               

               Cow position:
               chr9:44408289-44408093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               191-406
               

               Cow position:
               chr9:41782144-41781931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               76, 60
               

               Conread position:
               191-427
               

               Cow position:
               chr9:8778987-8779224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               82, 52
               

               Conread position:
               191-428
               

               Cow position:
               chr9:41317718-41317957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               76, 82
               

               Conread position:
               191-428
               

               Cow position:
               chr9:59795031-59795273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               74, 21
               

               Conread position:
               191-438
               

               Cow position:
               chr9:4861641-4861390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               84, 209
               

               Conread position:
               191-438
               

               Cow position:
               chr9:38193249-38193015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               191-438
               

               Cow position:
               chr9:47875698-47875954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 117
               

               Conread position:
               191-439
               

               Cow position:
               chr9:62134372-62134623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               141, 11
               

               Conread position:
               191-442
               

               Cow position:
               chr9:16745926-16745674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               84, 21
               

               Conread position:
               191-447
               

               Cow position:
               chr9:24997267-24997522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               191-447
               

               Cow position:
               chr9:34468344-34468581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               191-447
               

               Cow position:
               chr9:35850148-35849901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               191-510
               

               Cow position:
               chr9:41679984-41679673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               263, 36
               

               Conread position:
               191-520
               

               Cow position:
               chr9:25922072-25921739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               191-522
               

               Cow position:
               chr9:23541169-23541469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               256, 46
               

               Conread position:
               191-523
               

               Cow position:
               chr9:28948101-28947774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               62, 82
               

               Conread position:
               191-528
               

               Cow position:
               chr9:8724045-8723702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               85, 143
               

               Conread position:
               191-528
               

               Cow position:
               chr9:33218703-33219041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               84, 45
               

               Conread position:
               191-528
               

               Cow position:
               chr9:38846100-38846424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               75, 108
               

               Conread position:
               191-528
               

               Cow position:
               chr9:47869256-47868923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 110
               

               Conread position:
               192-313
               

               Cow position:
               chr9:51557114-51557238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               192-314
               

               Cow position:
               chr9:36844080-36843963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               192-320
               

               Cow position:
               chr9:20465465-20465596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               192-346
               

               Cow position:
               chr9:1350197-1350352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               192-354
               

               Cow position:
               chr9:5161818-5161978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               69, 74
               

               Conread position:
               192-354
               

               Cow position:
               chr9:26310806-26310637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               192-360
               

               Cow position:
               chr9:37141476-37141312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 58
               

               Conread position:
               192-365
               

               Cow position:
               chr9:3807489-3807665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               79, 145
               

               Conread position:
               192-365
               

               Cow position:
               chr9:14974678-14974855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               192-370
               

               Cow position:
               chr9:9491041-9490863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               109, 42
               

               Conread position:
               192-370
               

               Cow position:
               chr9:16218395-16218576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 87
               

               Conread position:
               192-373
               

               Cow position:
               chr9:5621782-5621968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               192-373
               

               Cow position:
               chr9:24726430-24726610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               69, 74
               

               Conread position:
               192-373
               

               Cow position:
               chr9:38875326-38875509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               192-373
               

               Cow position:
               chr9:52505055-52505243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               192-374
               

               Cow position:
               chr9:22227838-22228016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               192-374
               

               Cow position:
               chr9:25958662-25958486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               175, 20
               

               Conread position:
               192-374
               

               Cow position:
               chr9:42998223-42998401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               192-375
               

               Cow position:
               chr9:42585378-42585565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               109, 27
               

               Conread position:
               192-375
               

               Cow position:
               chr9:48343850-48343667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               192-380
               

               Cow position:
               chr9:30664530-30664723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               192-380
               

               Cow position:
               chr9:45170921-45171106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 41
               

               Conread position:
               192-383
               

               Cow position:
               chr9:19539345-19539149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               83, 185
               

               Conread position:
               192-383
               

               Cow position:
               chr9:20406886-20406693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               80, 148
               

               Conread position:
               192-387
               

               Cow position:
               chr9:17785213-17785406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               103, 80
               

               Conread position:
               192-387
               

               Cow position:
               chr9:36623204-36623390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               101, 45
               

               Conread position:
               192-393
               

               Cow position:
               chr9:41416599-41416397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               109, 72
               

               Conread position:
               192-402
               

               Cow position:
               chr9:49982849-49983060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 117
               

               Conread position:
               192-405
               

               Cow position:
               chr9:37528704-37528490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               81, 55
               

               Conread position:
               192-410
               

               Cow position:
               chr9:36067154-36066939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               114, 80
               

               Conread position:
               192-413
               

               Cow position:
               chr9:10877618-10877845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               192-414
               

               Cow position:
               chr9:3924864-3924664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               192-414
               

               Cow position:
               chr9:49404001-49403789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               192-415
               

               Cow position:
               chr9:58439533-58439753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               79, 65
               

               Conread position:
               192-417
               

               Cow position:
               chr9:4928879-4928653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               81, 179
               

               Conread position:
               192-418
               

               Cow position:
               chr9:18002701-18002928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               81, 44
               

               Conread position:
               192-418
               

               Cow position:
               chr9:64516848-64517073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               192-419
               

               Cow position:
               chr9:32812596-32812374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               75, 68
               

               Conread position:
               192-424
               

               Cow position:
               chr9:23028042-23027824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               192-425
               

               Cow position:
               chr9:35305872-35306099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               103, 59
               

               Conread position:
               192-428
               

               Cow position:
               chr9:27077003-27077226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               192-428
               

               Cow position:
               chr9:34000368-34000604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               67, 159
               

               Conread position:
               192-428
               

               Cow position:
               chr9:57951081-57951305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               103, 56
               

               Conread position:
               192-431
               

               Cow position:
               chr9:36999813-37000048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               83, 44
               

               Conread position:
               192-433
               

               Cow position:
               chr9:22114385-22114625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               75, 195
               

               Conread position:
               192-434
               

               Cow position:
               chr9:21840323-21840082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               192-434
               

               Cow position:
               chr9:39577982-39577742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               103, 61
               

               Conread position:
               192-435
               

               Cow position:
               chr9:1712237-1712467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               192-436
               

               Cow position:
               chr9:10092145-10092386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               109, 47
               

               Conread position:
               192-436
               

               Cow position:
               chr9:18252675-18252912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               112, 87
               

               Conread position:
               192-436
               

               Cow position:
               chr9:30749337-30749581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               103, 72
               

               Conread position:
               192-437
               

               Cow position:
               chr9:25546882-25546647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               192-438
               

               Cow position:
               chr9:1950167-1949925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               192-438
               

               Cow position:
               chr9:20989206-20989444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               109, 73
               

               Conread position:
               192-438
               

               Cow position:
               chr9:34919018-34919254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               103, 63
               

               Conread position:
               192-440
               

               Cow position:
               chr9:29034791-29035032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               175, 56
               

               Conread position:
               192-442
               

               Cow position:
               chr9:41995962-41995707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               192-443
               

               Cow position:
               chr9:54997775-54998028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               79, 190
               

               Conread position:
               192-445
               

               Cow position:
               chr9:8998603-8998348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               73, 41
               

               Conread position:
               192-446
               

               Cow position:
               chr9:17929020-17928755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               52, 215
               

               Conread position:
               192-446
               

               Cow position:
               chr9:20738950-20738695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               110, 45
               

               Conread position:
               192-446
               

               Cow position:
               chr9:41789526-41789282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               192-447
               

               Cow position:
               chr9:648023-647774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               192-447
               

               Cow position:
               chr9:4128536-4128784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               192-447
               

               Cow position:
               chr9:5268804-5268549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 158
               

               Conread position:
               192-447
               

               Cow position:
               chr9:6089345-6089085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               192-447
               

               Cow position:
               chr9:6225204-6225458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               110, 73
               

               Conread position:
               192-447
               

               Cow position:
               chr9:20318330-20318575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               75, 82
               

               Conread position:
               192-447
               

               Cow position:
               chr9:21030564-21030305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 179
               

               Conread position:
               192-447
               

               Cow position:
               chr9:22151839-22152088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               192-447
               

               Cow position:
               chr9:22638348-22638099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               106, 60
               

               Conread position:
               192-447
               

               Cow position:
               chr9:35375672-35375422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               192-447
               

               Cow position:
               chr9:35904503-35904748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               192-447
               

               Cow position:
               chr9:36827373-36827132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               192-447
               

               Cow position:
               chr9:47472944-47472682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               192-447
               

               Cow position:
               chr9:52407418-52407161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               103, 187
               

               Conread position:
               192-449
               

               Cow position:
               chr9:27697482-27697726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               192-450
               

               Cow position:
               chr9:34742480-34742730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               192-451
               

               Cow position:
               chr9:22361263-22361003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 115
               

               Conread position:
               192-457
               

               Cow position:
               chr9:30138374-30138123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               192-458
               

               Cow position:
               chr9:31626397-31626136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 99
               

               Conread position:
               192-466
               

               Cow position:
               chr9:54610983-54611259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               81, 142
               

               Conread position:
               192-474
               

               Cow position:
               chr9:33681932-33681641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               73, 43
               

               Conread position:
               192-495
               

               Cow position:
               chr9:20810813-20811111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 150
               

               Conread position:
               192-511
               

               Cow position:
               chr9:23430894-23431222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 151
               

               Conread position:
               192-512
               

               Cow position:
               chr9:3220371-3220060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               109, 40
               

               Conread position:
               192-512
               

               Cow position:
               chr9:7363275-7362952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               82, 71
               

               Conread position:
               192-512
               

               Cow position:
               chr9:50606705-50607021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               259, 70
               

               Conread position:
               192-513
               

               Cow position:
               chr9:44914847-44915173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               108, 55
               

               Conread position:
               192-514
               

               Cow position:
               chr9:13169420-13169740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               257, 45
               

               Conread position:
               192-514
               

               Cow position:
               chr9:44831807-44832129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 81
               

               Conread position:
               192-514
               

               Cow position:
               chr9:45285283-45285613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               192-515
               

               Cow position:
               chr9:5319877-5319543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               243
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               180, 71
               

               Conread position:
               192-517
               

               Cow position:
               chr9:32732438-32732760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               103, 80
               

               Conread position:
               192-517
               

               Cow position:
               chr9:36445870-36445540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               81, 24
               

               Conread position:
               192-518
               

               Cow position:
               chr9:5226916-5227257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 216
               

               Conread position:
               192-518
               

               Cow position:
               chr9:5756755-5757071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               256, 83
               

               Conread position:
               192-518
               

               Cow position:
               chr9:20416261-20416588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 124
               

               Conread position:
               192-518
               

               Cow position:
               chr9:28747274-28747602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 59
               

               Conread position:
               192-519
               

               Cow position:
               chr9:22443363-22443710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 203
               

               Conread position:
               192-519
               

               Cow position:
               chr9:54681750-54681427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               102, 58
               

               Conread position:
               192-520
               

               Cow position:
               chr9:9461407-9461738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               106, 73
               

               Conread position:
               192-520
               

               Cow position:
               chr9:9753147-9753475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               103, 68
               

               Conread position:
               192-520
               

               Cow position:
               chr9:20848184-20847851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 188
               

               Conread position:
               192-520
               

               Cow position:
               chr9:21888417-21888086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               192-520
               

               Cow position:
               chr9:24887448-24887122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 20
               

               Conread position:
               192-520
               

               Cow position:
               chr9:34901867-34902185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               80, 35
               

               Conread position:
               192-520
               

               Cow position:
               chr9:50076314-50075980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               44, 183
               

               Conread position:
               192-520
               

               Cow position:
               chr9:64091936-64091595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               192-521
               

               Cow position:
               chr9:5218931-5219257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 80
               

               Conread position:
               192-521
               

               Cow position:
               chr9:5763382-5763715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 143
               

               Conread position:
               192-521
               

               Cow position:
               chr9:9723634-9723961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               81, 33
               

               Conread position:
               192-521
               

               Cow position:
               chr9:10118417-10118738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               184, 75
               

               Conread position:
               192-521
               

               Cow position:
               chr9:13205322-13205651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               192-521
               

               Cow position:
               chr9:20900882-20901206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               109, 44
               

               Conread position:
               192-521
               

               Cow position:
               chr9:22696465-22696138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               102, 42
               

               Conread position:
               192-521
               

               Cow position:
               chr9:34697047-34697384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               83, 59
               

               Conread position:
               192-521
               

               Cow position:
               chr9:39681604-39681254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               83, 24
               

               Conread position:
               192-521
               

               Cow position:
               chr9:48118454-48118766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               103, 41
               

               Conread position:
               192-522
               

               Cow position:
               chr9:26404037-26403699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               80, 181
               

               Conread position:
               192-523
               

               Cow position:
               chr9:7410030-7409676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               109, 69
               

               Conread position:
               192-523
               

               Cow position:
               chr9:9595706-9596039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 175
               

               Conread position:
               192-523
               

               Cow position:
               chr9:23043023-23042691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               134, 30
               

               Conread position:
               192-524
               

               Cow position:
               chr9:5209832-5209495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 195
               

               Conread position:
               192-524
               

               Cow position:
               chr9:7634515-7634183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 50
               

               Conread position:
               192-524
               

               Cow position:
               chr9:9405807-9406141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               60, 27
               

               Conread position:
               192-524
               

               Cow position:
               chr9:17410936-17411281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               122, 59
               

               Conread position:
               192-524
               

               Cow position:
               chr9:17740696-17741030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 168
               

               Conread position:
               192-524
               

               Cow position:
               chr9:19714317-19713992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               87, 45
               

               Conread position:
               192-524
               

               Cow position:
               chr9:31078834-31079167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 64
               

               Conread position:
               192-524
               

               Cow position:
               chr9:31814130-31814474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               145, 54
               

               Conread position:
               192-524
               

               Cow position:
               chr9:38961190-38961516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               98, 59
               

               Conread position:
               192-524
               

               Cow position:
               chr9:43871220-43870887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               192-524
               

               Cow position:
               chr9:50976998-50977341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               125, 69
               

               Conread position:
               192-525
               

               Cow position:
               chr9:37069321-37069647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               75, 81
               

               Conread position:
               192-525
               

               Cow position:
               chr9:63746052-63745726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               192-526
               

               Cow position:
               chr9:9199536-9199869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               145, 73
               

               Conread position:
               192-526
               

               Cow position:
               chr9:9552335-9552001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               192-526
               

               Cow position:
               chr9:11299449-11299770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 10
               

               Conread position:
               192-526
               

               Cow position:
               chr9:17310314-17310650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 51
               

               Conread position:
               192-526
               

               Cow position:
               chr9:18381107-18380775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               106, 69
               

               Conread position:
               192-526
               

               Cow position:
               chr9:26086315-26085968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               80, 156
               

               Conread position:
               192-526
               

               Cow position:
               chr9:26344736-26345059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               261, 45
               

               Conread position:
               192-526
               

               Cow position:
               chr9:33119634-33119978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 183
               

               Conread position:
               192-526
               

               Cow position:
               chr9:34666657-34666354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               192-526
               

               Cow position:
               chr9:49764904-49764558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               81, 63
               

               Conread position:
               192-526
               

               Cow position:
               chr9:62442530-62442200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               105, 11
               

               Conread position:
               192-526
               

               Cow position:
               chr9:62657040-62656712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               81, 41
               

               Conread position:
               192-527
               

               Cow position:
               chr9:5509972-5509634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 154
               

               Conread position:
               192-527
               

               Cow position:
               chr9:10308759-10309086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 82
               

               Conread position:
               192-527
               

               Cow position:
               chr9:21459909-21460242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 76
               

               Conread position:
               192-527
               

               Cow position:
               chr9:29684395-29684054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 43
               

               Conread position:
               192-527
               

               Cow position:
               chr9:33598229-33597895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               108, 69
               

               Conread position:
               192-527
               

               Cow position:
               chr9:55084049-55084392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 45
               

               Conread position:
               192-527
               

               Cow position:
               chr9:55256301-55256643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 26
               

               Conread position:
               192-527
               

               Cow position:
               chr9:62357283-62357619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               192, 74
               

               Conread position:
               192-527
               

               Cow position:
               chr9:64559639-64559973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               103, 45
               

               Conread position:
               192-528
               

               Cow position:
               chr9:1751582-1751245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               256, 72
               

               Conread position:
               192-528
               

               Cow position:
               chr9:3782611-3782278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               83, 51
               

               Conread position:
               192-528
               

               Cow position:
               chr9:4646080-4646415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               192-528
               

               Cow position:
               chr9:5246097-5245761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               179, 58
               

               Conread position:
               192-528
               

               Cow position:
               chr9:5327502-5327166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               192-528
               

               Cow position:
               chr9:5442240-5441911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               192-528
               

               Cow position:
               chr9:5501099-5500760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 61
               

               Conread position:
               192-528
               

               Cow position:
               chr9:5594748-5594410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               107, 72
               

               Conread position:
               192-528
               

               Cow position:
               chr9:5836410-5836053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               76, 199
               

               Conread position:
               192-528
               

               Cow position:
               chr9:6952339-6952009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               192-528
               

               Cow position:
               chr9:8288865-8288526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               255, 73
               

               Conread position:
               192-528
               

               Cow position:
               chr9:8338278-8337935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               80, 122
               

               Conread position:
               192-528
               

               Cow position:
               chr9:9516522-9516846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 44
               

               Conread position:
               192-528
               

               Cow position:
               chr9:9624780-9625103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               183, 36
               

               Conread position:
               192-528
               

               Cow position:
               chr9:10011048-10010723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               103, 59
               

               Conread position:
               192-528
               

               Cow position:
               chr9:11068221-11068573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               74, 42
               

               Conread position:
               192-528
               

               Cow position:
               chr9:13670884-13670541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 143
               

               Conread position:
               192-528
               

               Cow position:
               chr9:15215433-15215779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               110, 188
               

               Conread position:
               192-528
               

               Cow position:
               chr9:15805673-15806015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               80, 123
               

               Conread position:
               192-528
               

               Cow position:
               chr9:16300323-16300662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               244
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               109, 15
               

               Conread position:
               192-528
               

               Cow position:
               chr9:17871859-17872202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 61
               

               Conread position:
               192-528
               

               Cow position:
               chr9:18216852-18217191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               80, 139
               

               Conread position:
               192-528
               

               Cow position:
               chr9:18342971-18342639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               261, 78
               

               Conread position:
               192-528
               

               Cow position:
               chr9:22318586-22318260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               175, 58
               

               Conread position:
               192-528
               

               Cow position:
               chr9:23388430-23388765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 52
               

               Conread position:
               192-528
               

               Cow position:
               chr9:26278925-26279261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 109
               

               Conread position:
               192-528
               

               Cow position:
               chr9:28726478-28726822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 14
               

               Conread position:
               192-528
               

               Cow position:
               chr9:29006808-29006466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 42
               

               Conread position:
               192-528
               

               Cow position:
               chr9:29184885-29185229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 82
               

               Conread position:
               192-528
               

               Cow position:
               chr9:29841135-29840812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               103, 59
               

               Conread position:
               192-528
               

               Cow position:
               chr9:30402172-30402518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               75, 56
               

               Conread position:
               192-528
               

               Cow position:
               chr9:31347202-31346858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               174, 76
               

               Conread position:
               192-528
               

               Cow position:
               chr9:32676934-32676591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               77, 200
               

               Conread position:
               192-528
               

               Cow position:
               chr9:33100892-33101208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               192-528
               

               Cow position:
               chr9:33940855-33940514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               103, 69
               

               Conread position:
               192-528
               

               Cow position:
               chr9:34287042-34286707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 35
               

               Conread position:
               192-528
               

               Cow position:
               chr9:34374681-34375016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               192-528
               

               Cow position:
               chr9:35167416-35167084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               102, 56
               

               Conread position:
               192-528
               

               Cow position:
               chr9:38793267-38792926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 189
               

               Conread position:
               192-528
               

               Cow position:
               chr9:40542362-40542044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               192-528
               

               Cow position:
               chr9:42498077-42497733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               103, 69
               

               Conread position:
               192-528
               

               Cow position:
               chr9:51204973-51204640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 152
               

               Conread position:
               192-528
               

               Cow position:
               chr9:51620684-51620352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               192-528
               

               Cow position:
               chr9:52484669-52485007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               98, 69
               

               Conread position:
               192-528
               

               Cow position:
               chr9:54528763-54528422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 187
               

               Conread position:
               192-528
               

               Cow position:
               chr9:54716374-54716694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               226, 8
               

               Conread position:
               192-528
               

               Cow position:
               chr9:55118326-55117996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 20
               

               Conread position:
               192-528
               

               Cow position:
               chr9:55890057-55889723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               192-528
               

               Cow position:
               chr9:56032080-56032408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 42
               

               Conread position:
               192-528
               

               Cow position:
               chr9:56453580-56453246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 151
               

               Conread position:
               192-528
               

               Cow position:
               chr9:56773327-56772984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               192-528
               

               Cow position:
               chr9:57896877-57897202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               259, 44
               

               Conread position:
               192-528
               

               Cow position:
               chr9:58133774-58134096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               80, 133
               

               Conread position:
               192-528
               

               Cow position:
               chr9:58979649-58979318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 174
               

               Conread position:
               192-528
               

               Cow position:
               chr9:59013087-59013431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 42
               

               Conread position:
               192-528
               

               Cow position:
               chr9:59386529-59386861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               88, 58
               

               Conread position:
               192-528
               

               Cow position:
               chr9:64050307-64050653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 83
               

               Conread position:
               192-528
               

               Cow position:
               chr9:64155608-64155943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               83, 174
               

               Conread position:
               193-328
               

               Cow position:
               chr9:58131477-58131615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               193-388
               

               Cow position:
               chr9:8997803-8997601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               193-438
               

               Cow position:
               chr9:5532200-5531950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               80, 188
               

               Conread position:
               193-447
               

               Cow position:
               chr9:9416160-9416399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               108, 55
               

               Conread position:
               193-518
               

               Cow position:
               chr9:32371513-32371833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               15, 82
               

               Conread position:
               193-527
               

               Cow position:
               chr9:6880017-6879688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               79, 130
               

               Conread position:
               193-528
               

               Cow position:
               chr9:3387937-3387614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               193-528
               

               Cow position:
               chr9:8636899-8636574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               153, 47
               

               Conread position:
               193-528
               

               Cow position:
               chr9:10144225-10144568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               193-528
               

               Cow position:
               chr9:42445735-42446074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 62
               

               Conread position:
               193-528
               

               Cow position:
               chr9:44467102-44467432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               80, 172
               

               Conread position:
               193-528
               

               Cow position:
               chr9:52578286-52578638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               79, 131
               

               Conread position:
               193-528
               

               Cow position:
               chr9:61997348-61997695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 165
               

               Conread position:
               194-346
               

               Cow position:
               chr9:22616869-22616719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               194-375
               

               Cow position:
               chr9:31077432-31077615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 80
               

               Conread position:
               194-410
               

               Cow position:
               chr9:8868890-8869109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               51, 142
               

               Conread position:
               194-437
               

               Cow position:
               chr9:26391014-26390776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               73, 79
               

               Conread position:
               194-438
               

               Cow position:
               chr9:1952023-1952264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               51, 39
               

               Conread position:
               194-447
               

               Cow position:
               chr9:824201-823957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               105, 48
               

               Conread position:
               194-447
               

               Cow position:
               chr9:35533705-35533956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               194-447
               

               Cow position:
               chr9:47499955-47500215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               16, 191
               

               Conread position:
               194-518
               

               Cow position:
               chr9:34689366-34689679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               260, 40
               

               Conread position:
               194-520
               

               Cow position:
               chr9:6192213-6192543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 121
               

               Conread position:
               194-520
               

               Cow position:
               chr9:18072871-18073180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               194-521
               

               Cow position:
               chr9:55074889-55075213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               100, 54
               

               Conread position:
               194-524
               

               Cow position:
               chr9:9443351-9443689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               56, 75
               

               Conread position:
               194-524
               

               Cow position:
               chr9:28773363-28773051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               194-527
               

               Cow position:
               chr9:8546564-8546239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               284, 64
               

               Conread position:
               194-527
               

               Cow position:
               chr9:55287645-55287980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               17, 150
               

               Conread position:
               194-528
               

               Cow position:
               chr9:3070177-3070500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               101, 56
               

               Conread position:
               194-528
               

               Cow position:
               chr9:6933826-6934165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 39
               

               Conread position:
               194-528
               

               Cow position:
               chr9:8534437-8534788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               79, 58
               

               Conread position:
               194-528
               

               Cow position:
               chr9:41283272-41282923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               249
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               194-528
               

               Cow position:
               chr9:47906043-47906373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               107, 38
               

               Conread position:
               194-528
               

               Cow position:
               chr9:50080800-50081132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               82, 57
               

               Conread position:
               195-350
               

               Cow position:
               chr9:2977627-2977472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 113
               

               Conread position:
               195-359
               

               Cow position:
               chr9:15982833-15983003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               195-359
               

               Cow position:
               chr9:16182245-16182408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 53
               

               Conread position:
               195-414
               

               Cow position:
               chr9:41773125-41773348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 174
               

               Conread position:
               195-416
               

               Cow position:
               chr9:41653034-41652814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               78, 186
               

               Conread position:
               195-438
               

               Cow position:
               chr9:18162910-18163153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               100, 147
               

               Conread position:
               195-447
               

               Cow position:
               chr9:35359857-35360107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               50, 140
               

               Conread position:
               195-523
               

               Cow position:
               chr9:36410107-36410433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               84, 186
               

               Conread position:
               195-526
               

               Cow position:
               chr9:388770-389105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               100, 63
               

               Conread position:
               195-527
               

               Cow position:
               chr9:43757768-43757447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               251, 64
               

               Conread position:
               195-528
               

               Cow position:
               chr9:8563086-8562730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               195-528
               

               Cow position:
               chr9:52131263-52130923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               103, 35
               

               Conread position:
               196-429
               

               Cow position:
               chr9:33038215-33038449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               77, 13
               

               Conread position:
               196-431
               

               Cow position:
               chr9:19542153-19541918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               73, 171
               

               Conread position:
               196-431
               

               Cow position:
               chr9:35203128-35202890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               85, 184
               

               Conread position:
               196-445
               

               Cow position:
               chr9:38344138-38343886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               196-447
               

               Cow position:
               chr9:49983448-49983692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               226, 76
               

               Conread position:
               196-453
               

               Cow position:
               chr9:29092048-29091784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               77, 189
               

               Conread position:
               196-501
               

               Cow position:
               chr9:49710088-49709782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               57, 155
               

               Conread position:
               196-512
               

               Cow position:
               chr9:33823342-33823042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               256, 71
               

               Conread position:
               196-514
               

               Cow position:
               chr9:766906-767227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               79, 50
               

               Conread position:
               196-514
               

               Cow position:
               chr9:36490651-36490979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               172, 59
               

               Conread position:
               196-520
               

               Cow position:
               chr9:61022855-61022539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               29, 74
               

               Conread position:
               196-524
               

               Cow position:
               chr9:1729432-1729762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               121, 57
               

               Conread position:
               196-527
               

               Cow position:
               chr9:41513863-41513541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               99, 56
               

               Conread position:
               197-428
               

               Cow position:
               chr9:40604193-40603961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               68, 180
               

               Conread position:
               197-513
               

               Cow position:
               chr9:46316545-46316858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 70
               

               Conread position:
               197-520
               

               Cow position:
               chr9:6840254-6839909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               197-527
               

               Cow position:
               chr9:52001251-52000929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 64
               

               Conread position:
               197-528
               

               Cow position:
               chr9:32306993-32307323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               47, 65
               

               Conread position:
               199-446
               

               Cow position:
               chr9:6397546-6397785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 8
               

               Conread position:
               199-447
               

               Cow position:
               chr9:56011738-56011496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 141
               

               Conread position:
               199-526
               

               Cow position:
               chr9:55795999-55795669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               66, 106
               

               Conread position:
               200-409
               

               Cow position:
               chr9:31292929-31292724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               10, 37
               

               Conread position:
               202-519
               

               Cow position:
               chr9:29825274-29824947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               199, 59
               

               Conread position:
               202-528
               

               Cow position:
               chr9:1520492-1520831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               70, 181
               

               Conread position:
               202-528
               

               Cow position:
               chr9:11319394-11319728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 41
               

               Conread position:
               206-430
               

               Cow position:
               chr9:59507315-59507103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               207-379
               

               Cow position:
               chr9:53608158-53608334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               207-427
               

               Cow position:
               chr9:5238629-5238413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               68, 117
               

               Conread position:
               207-519
               

               Cow position:
               chr9:45756593-45756280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               67, 93
               

               Conread position:
               207-528
               

               Cow position:
               chr9:4267747-4268076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               208-528
               

               Cow position:
               chr9:11313275-11313606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               64, 34
               

               Conread position:
               209-429
               

               Cow position:
               chr9:40302894-40303118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               209-442
               

               Cow position:
               chr9:62724777-62724535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 186
               

               Conread position:
               209-447
               

               Cow position:
               chr9:32711163-32710926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 163
               

               Conread position:
               209-452
               

               Cow position:
               chr9:9573566-9573321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               209-528
               

               Cow position:
               chr9:45141374-45141692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               210-447
               

               Cow position:
               chr9:6339032-6338790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 163
               

               Conread position:
               211-419
               

               Cow position:
               chr9:50667653-50667446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               84, 54
               

               Conread position:
               211-519
               

               Cow position:
               chr9:58972262-58972577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               62, 138
               

               Conread position:
               213-451
               

               Cow position:
               chr9:53211270-53211498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               88, 44
               

               Conread position:
               213-528
               

               Cow position:
               chr9:1532105-1532414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               60, 90
               

               Conread position:
               213-528
               

               Cow position:
               chr9:30477557-30477865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               109, 40
               

               Conread position:
               213-528
               

               Cow position:
               chr9:53762928-53762602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 125
               

               Conread position:
               214-447
               

               Cow position:
               chr9:3371805-3371564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 181
               

               Conread position:
               214-449
               

               Cow position:
               chr9:58734601-58734362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               18, 164
               

               Conread position:
               214-451
               

               Cow position:
               chr9:27279544-27279302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               61, 177
               

               Conread position:
               215-438
               

               Cow position:
               chr9:1997363-1997143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               216-528
               

               Cow position:
               chr9:26057214-26057522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               218-401
               

               Cow position:
               chr9:32829794-32829967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               219-524
               

               Cow position:
               chr9:1938347-1938036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 50
               

               Conread position:
               219-524
               

               Cow position:
               chr9:48628251-48627940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 6
               

               Conread position:
               219-528
               

               Cow position:
               chr9:28354739-28354425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               224, 46
               

               Conread position:
               220-447
               

               Cow position:
               chr9:17799850-17799623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               220-447
               

               Cow position:
               chr9:26440576-26440815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               34, 170
               

               Conread position:
               220-447
               

               Cow position:
               chr9:44833745-44833966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 58
               

               Conread position:
               224-444
               

               Cow position:
               chr9:30195429-30195214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               48, 102
               

               Conread position:
               224-526
               

               Cow position:
               chr9:43444011-43443714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               71, 47
               

               Conread position:
               224-528
               

               Cow position:
               chr9:33093170-33092866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               78, 41
               

               Conread position:
               225-511
               

               Cow position:
               chr9:19493244-19493541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               50, 171
               

               Conread position:
               227-519
               

               Cow position:
               chr9:35708408-35708701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               144, 98
               

               Conread position:
               230-527
               

               Cow position:
               chr9:61303217-61302909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               235-428
               

               Cow position:
               chr9:1879586-1879396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 125
               

               Conread position:
               235-525
               

               Cow position:
               chr9:8525045-8524770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 141
               

               Conread position:
               237-528
               

               Cow position:
               chr9:62668459-62668158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 98
               

               Conread position:
               238-524
               

               Cow position:
               chr9:11123281-11123571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               239-528
               

               Cow position:
               chr9:19067983-19067692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               12, 80
               

               Conread position:
               239-528
               

               Cow position:
               chr9:50543216-50543521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               32, 10
               

               Conread position:
               240-527
               

               Cow position:
               chr9:9402977-9403271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               240-528
               

               Cow position:
               chr9:32019134-32019416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               241-528
               

               Cow position:
               chr9:3738019-3738316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 127
               

               Conread position:
               242-469
               

               Cow position:
               chr9:42037855-42037626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 67
               

               Conread position:
               243-514
               

               Cow position:
               chr9:60027392-60027119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               211
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               179, 24
               

               Conread position:
               243-527
               

               Cow position:
               chr9:9654112-9654398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 7
               

               Conread position:
               244-447
               

               Cow position:
               chr9:30652508-30652713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               244-505
               

               Cow position:
               chr9:11364089-11363828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               244-518
               

               Cow position:
               chr9:12225787-12226059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               211, 26
               

               Conread position:
               244-527
               

               Cow position:
               chr9:4340970-4341250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               32, 129
               

               Conread position:
               244-528
               

               Cow position:
               chr9:8920198-8919909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 163
               

               Conread position:
               250-511
               

               Cow position:
               chr9:24873022-24872761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               203, 82
               

               Conread position:
               251-387
               

               Cow position:
               chr9:62151294-62151157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 80
               

               Conread position:
               251-528
               

               Cow position:
               chr9:41728448-41728167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               252-528
               

               Cow position:
               chr9:20579420-20579687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               203, 15
               

               Conread position:
               253-427
               

               Cow position:
               chr9:14358353-14358180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               253-516
               

               Cow position:
               chr9:49417178-49416907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 123
               

               Conread position:
               253-524
               

               Cow position:
               chr9:30124111-30123841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 100
               

               Conread position:
               253-528
               

               Cow position:
               chr9:19555565-19555284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 110
               

               Conread position:
               266-518
               

               Cow position:
               chr9:49292971-49293225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 103
               

               Conread position:
               270-524
               

               Cow position:
               chr9:5077550-5077793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               197, 51
               

               Conread position:
               273-428
               

               Cow position:
               chr9:4323990-4324141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               273-446
               

               Cow position:
               chr9:44921223-44921395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               101, 119
               

               Conread position:
               273-447
               

               Cow position:
               chr9:43875554-43875720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               273-455
               

               Cow position:
               chr9:31638473-31638651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 104
               

               Conread position:
               273-525
               

               Cow position:
               chr9:6851900-6852156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 104
               

               Conread position:
               273-527
               

               Cow position:
               chr9:51720734-51720988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               28, 104
               

               Conread position:
               273-528
               

               Cow position:
               chr9:5263668-5263407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 42
               

               Conread position:
               273-528
               

               Cow position:
               chr9:8901056-8901318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               273-528
               

               Cow position:
               chr9:11168898-11168637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               28, 104
               

               Conread position:
               273-528
               

               Cow position:
               chr9:12910234-12910495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               100, 111
               

               Conread position:
               273-528
               

               Cow position:
               chr9:25557133-25556880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               112, 57
               

               Conread position:
               273-528
               

               Cow position:
               chr9:26477384-26477123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 65
               

               Conread position:
               273-528
               

               Cow position:
               chr9:31557561-31557818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 64
               

               Conread position:
               274-432
               

               Cow position:
               chr9:34106889-34106735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               54, 97
               

               Conread position:
               277-522
               

               Cow position:
               chr9:63896700-63896456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               278-521
               

               Cow position:
               chr9:47445864-47446099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 86
               

               Conread position:
               278-526
               

               Cow position:
               chr9:17518326-17518579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               17, 84
               

               Conread position:
               278-528
               

               Cow position:
               chr9:3774327-3774073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 102
               

               Conread position:
               278-528
               

               Cow position:
               chr9:40215406-40215154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 96
               

               Conread position:
               279-520
               

               Cow position:
               chr9:3378906-3378670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               174, 35
               

               Conread position:
               280-431
               

               Cow position:
               chr9:42509275-42509129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               116, 56
               

               Conread position:
               281-438
               

               Cow position:
               chr9:9086357-9086197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               281-528
               

               Cow position:
               chr9:39011317-39011561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               282-520
               

               Cow position:
               chr9:33697185-33696952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               173, 18
               

               Conread position:
               283-526
               

               Cow position:
               chr9:52267599-52267845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               170, 100
               

               Conread position:
               285-528
               

               Cow position:
               chr9:33114501-33114254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               154, 17
               

               Conread position:
               291-521
               

               Cow position:
               chr9:7953049-7952816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               138, 44
               

               Conread position:
               300-502
               

               Cow position:
               chr9:41486100-41486308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 85
               

               Conread position:
               300-521
               

               Cow position:
               chr9:10819692-10819913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               132, 78
               

               Conread position:
               300-525
               

               Cow position:
               chr9:34284088-34283865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               301-528
               

               Cow position:
               chr9:1867589-1867360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               153, 74
               

               Conread position:
               302-528
               

               Cow position:
               chr9:52839748-52839971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               155, 69
               

               Conread position:
               303-524
               

               Cow position:
               chr9:54493279-54493047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               305-524
               

               Cow position:
               chr9:6189236-6189453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               146, 78
               

               Conread position:
               305-528
               

               Cow position:
               chr9:6596099-6596322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 78
               

               Conread position:
               306-528
               

               Cow position:
               chr9:26310642-26310413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               147, 23
               

               Conread position:
               315-527
               

               Cow position:
               chr9:29339199-29339403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               127, 26
               

               Conread position:
               320-527
               

               Cow position:
               chr9:20465839-20466050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               322-528
               

               Cow position:
               chr9:37199241-37199036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               129, 20
               

               Conread position:
               323-524
               

               Cow position:
               chr9:33584565-33584773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               324-528
               

               Cow position:
               chr9:21080679-21080469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               128, 59
               

               Conread position:
               324-528
               

               Cow position:
               chr9:38941315-38941524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               125, 52
               

               Conread position:
               327-515
               

               Cow position:
               chr9:23955870-23956059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               126, 47
               

               Conread position:
               331-526
               

               Cow position:
               chr9:28754929-28754729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               120, 45
               

               Conread position:
               339-514
               

               Cow position:
               chr9:29194921-29195102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               112, 20
               

               Conread position:
               341-527
               

               Cow position:
               chr9:30780215-30780027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               341-527
               

               Cow position:
               chr9:54615202-54615391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               108, 13
               

               Conread position:
               347-528
               

               Cow position:
               chr9:8628822-8629009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               108, 29
               

               Conread position:
               349-528
               

               Cow position:
               chr9:59997941-59998124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               351-527
               

               Cow position:
               chr9:44770108-44770282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               353-528
               

               Cow position:
               chr9:34024789-34024608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               98, 25
               

               Conread position:
               354-528
               

               Cow position:
               chr9:9686327-9686504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               359-524
               

               Cow position:
               chr9:50382243-50382410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               360-521
               

               Cow position:
               chr9:63361635-63361804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               369-521
               

               Cow position:
               chr9:53996104-53996255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 82
               

               Conread position:
               379-527
               

               Cow position:
               chr9:39758583-39758427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               386-528
               

               Cow position:
               chr9:36628176-36628027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               63, 125
               

               Conread position:
               387-526
               

               Cow position:
               chr9:33151799-33151652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               391-528
               

               Cow position:
               chr9:59699494-59699640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               392-525
               

               Cow position:
               chr9:52258015-52258151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               58, 65
               

               Conread position:
               396-528
               

               Cow position:
               chr9:55354659-55354519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 0
               
Show alignments to all cow chromosomes.
Conread position:	179-528
Cow position:	chr9:50139542-50139193 (view UCSC Genome Browser custom track)
Alignm length:	363
Alignm identity:	258
Alignm E-value:	9.80909e-45
Alignm gaps (pig, cow):	116, 72
Conread position:	180-524
Cow position:	chr9:1973202-1972860 (view UCSC Genome Browser custom track)
Alignm length:	348
Alignm identity:	232
Alignm E-value:	7e-39
Alignm gaps (pig, cow):	121, 85
Conread position:	180-528
Cow position:	chr9:61544909-61544569 (view UCSC Genome Browser custom track)
Alignm length:	351
Alignm identity:	222
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	112, 105
Conread position:	181-447
Cow position:	chr9:56087810-56088071 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	176
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	115, 27
Conread position:	185-428
Cow position:	chr9:25657769-25657525 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	170
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	50, 182
Conread position:	187-528
Cow position:	chr9:34957798-34958149 (view UCSC Genome Browser custom track)
Alignm length:	355
Alignm identity:	274
Alignm E-value:	0
Alignm gaps (pig, cow):	88, 152
Conread position:	189-351
Cow position:	chr9:26828570-26828736 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	122
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	82, 161
Conread position:	189-363
Cow position:	chr9:31640067-31640245 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	131
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	90, 0
Conread position:	189-365
Cow position:	chr9:8612538-8612357 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	132
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	81, 0
Conread position:	189-372
Cow position:	chr9:8937399-8937213 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	135
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	52, 45
Conread position:	189-374
Cow position:	chr9:44108579-44108763 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	136
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	84, 45
Conread position:	189-393
Cow position:	chr9:34093174-34093387 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	146
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	81, 0
Conread position:	189-394
Cow position:	chr9:27052082-27052290 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	145
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	81, 182
Conread position:	189-413
Cow position:	chr9:47954974-47955194 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	159
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	80, 8
Conread position:	189-414
Cow position:	chr9:60037907-60037680 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	180
Alignm E-value:	8.00001e-41
Alignm gaps (pig, cow):	14, 47
Conread position:	189-415
Cow position:	chr9:847668-847887 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	154
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	182, 77
Conread position:	189-428
Cow position:	chr9:30189351-30189111 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	170
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	81, 108
Conread position:	189-433
Cow position:	chr9:19637387-19637622 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	170
Alignm E-value:	8e-30
Alignm gaps (pig, cow):	129, 0
Conread position:	189-438
Cow position:	chr9:50295772-50296029 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	171
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	73, 181
Conread position:	189-445
Cow position:	chr9:29108788-29108535 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	175
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	78, 30