Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rpigcf0_010910.5
        

               Conread position:
               115-446
               

               Cow position:
               chrX:13785627-13785302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               155-508
               

               Cow position:
               chrX:47186548-47186199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               139, 50
               

               Conread position:
               180-431
               

               Cow position:
               chrX:3489089-3488845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 50
               

               Conread position:
               182-528
               

               Cow position:
               chrX:35383224-35382889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 152
               

               Conread position:
               183-521
               

               Cow position:
               chrX:32820828-32821169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               187-397
               

               Cow position:
               chrX:10373113-10373325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 140
               

               Conread position:
               188-437
               

               Cow position:
               chrX:40116225-40116466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               244, 77
               

               Conread position:
               188-438
               

               Cow position:
               chrX:25232394-25232643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               83, 67
               

               Conread position:
               188-447
               

               Cow position:
               chrX:39126140-39126385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               189-350
               

               Cow position:
               chrX:7806184-7806345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 19
               

               Conread position:
               189-365
               

               Cow position:
               chrX:160230-160052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               81, 63
               

               Conread position:
               189-365
               

               Cow position:
               chrX:2648546-2648373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               189-374
               

               Cow position:
               chrX:25571189-25571007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               125, 72
               

               Conread position:
               189-384
               

               Cow position:
               chrX:13191739-13191546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               74, 84
               

               Conread position:
               189-389
               

               Cow position:
               chrX:24200994-24201191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               134, 14
               

               Conread position:
               189-404
               

               Cow position:
               chrX:8991692-8991901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               107, 46
               

               Conread position:
               189-408
               

               Cow position:
               chrX:28097929-28098135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 35
               

               Conread position:
               189-428
               

               Cow position:
               chrX:12115844-12116087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 46
               

               Conread position:
               189-432
               

               Cow position:
               chrX:36250057-36249817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               107, 66
               

               Conread position:
               189-433
               

               Cow position:
               chrX:10866063-10865829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               47, 79
               

               Conread position:
               189-437
               

               Cow position:
               chrX:31340509-31340760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               81, 220
               

               Conread position:
               189-438
               

               Cow position:
               chrX:18456197-18456456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               189-438
               

               Cow position:
               chrX:29032219-29032465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               134, 41
               

               Conread position:
               189-439
               

               Cow position:
               chrX:10306475-10306728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               77, 160
               

               Conread position:
               189-446
               

               Cow position:
               chrX:754763-755021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               92, 211
               

               Conread position:
               189-447
               

               Cow position:
               chrX:23583363-23583620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               92, 134
               

               Conread position:
               189-447
               

               Cow position:
               chrX:25337984-25338247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               84, 226
               

               Conread position:
               189-447
               

               Cow position:
               chrX:28632675-28632426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               189-447
               

               Cow position:
               chrX:31260825-31260560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               83, 126
               

               Conread position:
               189-447
               

               Cow position:
               chrX:32309910-32310164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               81, 115
               

               Conread position:
               189-447
               

               Cow position:
               chrX:40692933-40692692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               189-453
               

               Cow position:
               chrX:21672356-21672619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               82, 191
               

               Conread position:
               189-485
               

               Cow position:
               chrX:16790033-16789757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               254, 59
               

               Conread position:
               189-513
               

               Cow position:
               chrX:39546169-39545849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               134, 109
               

               Conread position:
               189-519
               

               Cow position:
               chrX:7425270-7425606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 134
               

               Conread position:
               189-520
               

               Cow position:
               chrX:10959596-10959255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               87, 205
               

               Conread position:
               189-520
               

               Cow position:
               chrX:21664919-21664581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               88, 7
               

               Conread position:
               189-520
               

               Cow position:
               chrX:25419357-25419013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               83, 243
               

               Conread position:
               189-520
               

               Cow position:
               chrX:45174649-45174990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               49, 134
               

               Conread position:
               189-522
               

               Cow position:
               chrX:2300738-2301066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               169, 59
               

               Conread position:
               189-522
               

               Cow position:
               chrX:10302143-10302483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               78, 84
               

               Conread position:
               189-523
               

               Cow position:
               chrX:20801584-20801912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               260, 38
               

               Conread position:
               189-524
               

               Cow position:
               chrX:6563317-6563664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               189-524
               

               Cow position:
               chrX:24259777-24259438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               182, 83
               

               Conread position:
               189-525
               

               Cow position:
               chrX:2029194-2029532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 112
               

               Conread position:
               189-528
               

               Cow position:
               chrX:13177660-13177328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 75
               

               Conread position:
               189-528
               

               Cow position:
               chrX:47046715-47046364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               51, 193
               

               Conread position:
               190-323
               

               Cow position:
               chrX:48536860-48536724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               190-422
               

               Cow position:
               chrX:17271483-17271247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               82, 151
               

               Conread position:
               190-455
               

               Cow position:
               chrX:24132346-24132084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 98
               

               Conread position:
               190-467
               

               Cow position:
               chrX:11746647-11746928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               83, 64
               

               Conread position:
               190-495
               

               Cow position:
               chrX:41560433-41560151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               181, 61
               

               Conread position:
               191-374
               

               Cow position:
               chrX:42282239-42282418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               176, 70
               

               Conread position:
               191-375
               

               Cow position:
               chrX:42499222-42499040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 84
               

               Conread position:
               191-423
               

               Cow position:
               chrX:37048773-37048546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 114
               

               Conread position:
               191-426
               

               Cow position:
               chrX:9227176-9226936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               44, 174
               

               Conread position:
               191-428
               

               Cow position:
               chrX:2186065-2186294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               81, 108
               

               Conread position:
               191-429
               

               Cow position:
               chrX:14900915-14900689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               191-438
               

               Cow position:
               chrX:20792011-20791765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               180, 69
               

               Conread position:
               191-438
               

               Cow position:
               chrX:25713603-25713846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               82, 15
               

               Conread position:
               191-447
               

               Cow position:
               chrX:15814904-15815143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               191-447
               

               Cow position:
               chrX:20709878-20710133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               82, 174
               

               Conread position:
               191-447
               

               Cow position:
               chrX:38936507-38936759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               203, 76
               

               Conread position:
               191-456
               

               Cow position:
               chrX:20752066-20752323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               191-467
               

               Cow position:
               chrX:40567406-40567676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               74, 147
               

               Conread position:
               191-515
               

               Cow position:
               chrX:22624288-22624611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 21
               

               Conread position:
               191-518
               

               Cow position:
               chrX:29120863-29121185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               258, 49
               

               Conread position:
               191-519
               

               Cow position:
               chrX:11073382-11073052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               81, 54
               

               Conread position:
               191-520
               

               Cow position:
               chrX:1616241-1615908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 307
               

               Conread position:
               191-523
               

               Cow position:
               chrX:1503145-1503470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               45, 54
               

               Conread position:
               191-525
               

               Cow position:
               chrX:30421133-30420807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               45, 158
               

               Conread position:
               191-525
               

               Cow position:
               chrX:37119406-37119737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               191-525
               

               Cow position:
               chrX:45110462-45110801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               81, 95
               

               Conread position:
               191-526
               

               Cow position:
               chrX:126599-126913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               117, 81
               

               Conread position:
               191-526
               

               Cow position:
               chrX:10412182-10411838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 131
               

               Conread position:
               191-527
               

               Cow position:
               chrX:11082807-11082475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               176, 72
               

               Conread position:
               191-527
               

               Cow position:
               chrX:37910259-37910591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               240, 38
               

               Conread position:
               191-528
               

               Cow position:
               chrX:6690441-6690112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               111, 60
               

               Conread position:
               191-528
               

               Cow position:
               chrX:7351106-7351445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               192-335
               

               Cow position:
               chrX:42855216-42855365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               192-337
               

               Cow position:
               chrX:6639933-6640082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               103, 69
               

               Conread position:
               192-345
               

               Cow position:
               chrX:31745239-31745081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 103
               

               Conread position:
               192-346
               

               Cow position:
               chrX:16324156-16324003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               103, 63
               

               Conread position:
               192-347
               

               Cow position:
               chrX:42339128-42338980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               192-350
               

               Cow position:
               chrX:2206736-2206585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               192-350
               

               Cow position:
               chrX:15545702-15545859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 45
               

               Conread position:
               192-352
               

               Cow position:
               chrX:877216-877061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               102, 60
               

               Conread position:
               192-352
               

               Cow position:
               chrX:40183542-40183376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               192-355
               

               Cow position:
               chrX:44731402-44731568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               192-357
               

               Cow position:
               chrX:9997526-9997363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               82, 45
               

               Conread position:
               192-361
               

               Cow position:
               chrX:4942942-4942780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               192-365
               

               Cow position:
               chrX:19019303-19019126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               192-370
               

               Cow position:
               chrX:35284431-35284605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               103, 59
               

               Conread position:
               192-370
               

               Cow position:
               chrX:36283153-36283337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               192-372
               

               Cow position:
               chrX:32020314-32020132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               109, 73
               

               Conread position:
               192-372
               

               Cow position:
               chrX:46315573-46315390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               192-374
               

               Cow position:
               chrX:28847071-28846892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               112, 63
               

               Conread position:
               192-376
               

               Cow position:
               chrX:41403780-41403969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 183
               

               Conread position:
               192-376
               

               Cow position:
               chrX:41410328-41410517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 183
               

               Conread position:
               192-381
               

               Cow position:
               chrX:21665786-21665597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               192-381
               

               Cow position:
               chrX:40452405-40452213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               192-382
               

               Cow position:
               chrX:11806209-11806016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               49, 42
               

               Conread position:
               192-388
               

               Cow position:
               chrX:35388098-35387900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               81, 183
               

               Conread position:
               192-398
               

               Cow position:
               chrX:35609794-35610002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               192-410
               

               Cow position:
               chrX:20582838-20583044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               192-411
               

               Cow position:
               chrX:48195233-48195012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               106, 165
               

               Conread position:
               192-413
               

               Cow position:
               chrX:41790637-41790418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               192-413
               

               Cow position:
               chrX:46722933-46722709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               68, 183
               

               Conread position:
               192-418
               

               Cow position:
               chrX:44053066-44053290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               75, 81
               

               Conread position:
               192-421
               

               Cow position:
               chrX:17908476-17908255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               192-421
               

               Cow position:
               chrX:30833038-30832819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               192-421
               

               Cow position:
               chrX:38439282-38439514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 196
               

               Conread position:
               192-424
               

               Cow position:
               chrX:41743720-41743950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               109, 69
               

               Conread position:
               192-426
               

               Cow position:
               chrX:26285787-26286019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               192-427
               

               Cow position:
               chrX:47453934-47454170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               103, 227
               

               Conread position:
               192-428
               

               Cow position:
               chrX:4091455-4091680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               73, 48
               

               Conread position:
               192-428
               

               Cow position:
               chrX:14924808-14925040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               109, 12
               

               Conread position:
               192-428
               

               Cow position:
               chrX:25237984-25238219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               102, 66
               

               Conread position:
               192-428
               

               Cow position:
               chrX:27516340-27516570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               104, 70
               

               Conread position:
               192-428
               

               Cow position:
               chrX:29509636-29509398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               61, 77
               

               Conread position:
               192-429
               

               Cow position:
               chrX:40647785-40648027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               61, 206
               

               Conread position:
               192-429
               

               Cow position:
               chrX:47757121-47756887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               103, 69
               

               Conread position:
               192-430
               

               Cow position:
               chrX:32128173-32127950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               103, 46
               

               Conread position:
               192-432
               

               Cow position:
               chrX:34990848-34991080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               81, 42
               

               Conread position:
               192-433
               

               Cow position:
               chrX:17497904-17498130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               201, 59
               

               Conread position:
               192-433
               

               Cow position:
               chrX:28157293-28157543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 132
               

               Conread position:
               192-434
               

               Cow position:
               chrX:44835008-44834760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 170
               

               Conread position:
               192-436
               

               Cow position:
               chrX:22812868-22813117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               80, 160
               

               Conread position:
               192-436
               

               Cow position:
               chrX:36961443-36961689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               81, 191
               

               Conread position:
               192-437
               

               Cow position:
               chrX:28105728-28105967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               192-438
               

               Cow position:
               chrX:4269259-4269015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               102, 71
               

               Conread position:
               192-438
               

               Cow position:
               chrX:15139737-15139497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               83, 44
               

               Conread position:
               192-438
               

               Cow position:
               chrX:19015250-19015487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 47
               

               Conread position:
               192-438
               

               Cow position:
               chrX:33466421-33466658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               192-438
               

               Cow position:
               chrX:34270214-34270452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               109, 54
               

               Conread position:
               192-438
               

               Cow position:
               chrX:35681154-35681392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               103, 38
               

               Conread position:
               192-438
               

               Cow position:
               chrX:36778215-36778458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               80, 166
               

               Conread position:
               192-438
               

               Cow position:
               chrX:42461938-42461694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               78, 181
               

               Conread position:
               192-438
               

               Cow position:
               chrX:42874785-42875033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 190
               

               Conread position:
               192-439
               

               Cow position:
               chrX:8899832-8900078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               77, 173
               

               Conread position:
               192-445
               

               Cow position:
               chrX:1176175-1175925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 171
               

               Conread position:
               192-445
               

               Cow position:
               chrX:2467687-2467941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               80, 167
               

               Conread position:
               192-445
               

               Cow position:
               chrX:8070894-8070642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               192-445
               

               Cow position:
               chrX:11856237-11856487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               192-445
               

               Cow position:
               chrX:47344102-47344353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               192-445
               

               Cow position:
               chrX:47484464-47484207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               83, 182
               

               Conread position:
               192-445
               

               Cow position:
               chrX:47967407-47967664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               106, 81
               

               Conread position:
               192-445
               

               Cow position:
               chrX:48010402-48010661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 168
               

               Conread position:
               192-446
               

               Cow position:
               chrX:23970196-23970438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               179, 56
               

               Conread position:
               192-447
               

               Cow position:
               chrX:841966-842216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               106, 71
               

               Conread position:
               192-447
               

               Cow position:
               chrX:3579752-3580003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               103, 69
               

               Conread position:
               192-447
               

               Cow position:
               chrX:6234641-6234390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               192-447
               

               Cow position:
               chrX:7497051-7497302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               204, 71
               

               Conread position:
               192-447
               

               Cow position:
               chrX:9041422-9041185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               192-447
               

               Cow position:
               chrX:10831689-10831431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               81, 204
               

               Conread position:
               192-447
               

               Cow position:
               chrX:11589781-11589529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               192-447
               

               Cow position:
               chrX:12018083-12018351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               43, 193
               

               Conread position:
               192-447
               

               Cow position:
               chrX:13912888-13913134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               70, 76
               

               Conread position:
               192-447
               

               Cow position:
               chrX:16762580-16762830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               110, 48
               

               Conread position:
               192-447
               

               Cow position:
               chrX:17231542-17231794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               104, 76
               

               Conread position:
               192-447
               

               Cow position:
               chrX:21004489-21004743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               192-447
               

               Cow position:
               chrX:23563989-23563732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 183
               

               Conread position:
               192-447
               

               Cow position:
               chrX:27176512-27176253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               61, 90
               

               Conread position:
               192-447
               

               Cow position:
               chrX:27680209-27680457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               192-447
               

               Cow position:
               chrX:29545072-29544818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               192-447
               

               Cow position:
               chrX:31949123-31948876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               106, 65
               

               Conread position:
               192-447
               

               Cow position:
               chrX:32420026-32420271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               112, 169
               

               Conread position:
               192-447
               

               Cow position:
               chrX:34663036-34662787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               106, 45
               

               Conread position:
               192-447
               

               Cow position:
               chrX:37540932-37541177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               106, 71
               

               Conread position:
               192-447
               

               Cow position:
               chrX:38071963-38071707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               46, 42
               

               Conread position:
               192-447
               

               Cow position:
               chrX:38935089-38935338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               83, 117
               

               Conread position:
               192-447
               

               Cow position:
               chrX:40481065-40480810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               72, 196
               

               Conread position:
               192-447
               

               Cow position:
               chrX:42507839-42507589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               121, 141
               

               Conread position:
               192-448
               

               Cow position:
               chrX:41198912-41199167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               110, 65
               

               Conread position:
               192-451
               

               Cow position:
               chrX:13265812-13265568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               192-451
               

               Cow position:
               chrX:19188744-19188994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               103, 181
               

               Conread position:
               192-454
               

               Cow position:
               chrX:4750493-4750235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               81, 24
               

               Conread position:
               192-456
               

               Cow position:
               chrX:6488394-6488647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               103, 55
               

               Conread position:
               192-457
               

               Cow position:
               chrX:27442747-27442489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               237, 14
               

               Conread position:
               192-458
               

               Cow position:
               chrX:37843528-37843788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               108, 71
               

               Conread position:
               192-467
               

               Cow position:
               chrX:11561960-11562243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 215
               

               Conread position:
               192-493
               

               Cow position:
               chrX:7508947-7509252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               192-494
               

               Cow position:
               chrX:43049152-43049445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               79, 181
               

               Conread position:
               192-503
               

               Cow position:
               chrX:11313973-11313663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 41
               

               Conread position:
               192-508
               

               Cow position:
               chrX:11455246-11454921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               105, 56
               

               Conread position:
               192-508
               

               Cow position:
               chrX:28134153-28134466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               44, 104
               

               Conread position:
               192-510
               

               Cow position:
               chrX:19690025-19690345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               84, 143
               

               Conread position:
               192-511
               

               Cow position:
               chrX:35273159-35273495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 133
               

               Conread position:
               192-511
               

               Cow position:
               chrX:35413440-35413741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               149, 45
               

               Conread position:
               192-511
               

               Cow position:
               chrX:37574664-37574971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               259, 45
               

               Conread position:
               192-511
               

               Cow position:
               chrX:42470129-42469810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 58
               

               Conread position:
               192-512
               

               Cow position:
               chrX:1499477-1499798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               102, 58
               

               Conread position:
               192-512
               

               Cow position:
               chrX:7277727-7278043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               71, 56
               

               Conread position:
               192-512
               

               Cow position:
               chrX:20151658-20151988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               103, 45
               

               Conread position:
               192-512
               

               Cow position:
               chrX:27432111-27431786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 184
               

               Conread position:
               192-513
               

               Cow position:
               chrX:11939119-11938801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 77
               

               Conread position:
               192-513
               

               Cow position:
               chrX:38853004-38853330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 65
               

               Conread position:
               192-514
               

               Cow position:
               chrX:6544064-6544388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               192-514
               

               Cow position:
               chrX:18695112-18694796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 63
               

               Conread position:
               192-514
               

               Cow position:
               chrX:22482881-22482557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               80, 74
               

               Conread position:
               192-514
               

               Cow position:
               chrX:29542411-29542093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               192-514
               

               Cow position:
               chrX:35224107-35224431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 24
               

               Conread position:
               192-514
               

               Cow position:
               chrX:37232217-37232541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 195
               

               Conread position:
               192-514
               

               Cow position:
               chrX:47481607-47481930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               82, 60
               

               Conread position:
               192-515
               

               Cow position:
               chrX:47248977-47248643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               71, 78
               

               Conread position:
               192-516
               

               Cow position:
               chrX:917564-917232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               61, 119
               

               Conread position:
               192-519
               

               Cow position:
               chrX:678760-678435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 202
               

               Conread position:
               192-519
               

               Cow position:
               chrX:3130389-3130711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               248, 103
               

               Conread position:
               192-519
               

               Cow position:
               chrX:14884154-14883815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 187
               

               Conread position:
               192-519
               

               Cow position:
               chrX:34554536-34554862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               112, 42
               

               Conread position:
               192-519
               

               Cow position:
               chrX:41122879-41123198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               106, 42
               

               Conread position:
               192-520
               

               Cow position:
               chrX:5017600-5017282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               192-520
               

               Cow position:
               chrX:9425934-9425613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               80, 172
               

               Conread position:
               192-520
               

               Cow position:
               chrX:17725782-17726116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 75
               

               Conread position:
               192-520
               

               Cow position:
               chrX:27509212-27508886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               256, 71
               

               Conread position:
               192-520
               

               Cow position:
               chrX:31294736-31294432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               252, 10
               

               Conread position:
               192-520
               

               Cow position:
               chrX:34502726-34503060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 187
               

               Conread position:
               192-520
               

               Cow position:
               chrX:39558539-39558210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 63
               

               Conread position:
               192-520
               

               Cow position:
               chrX:40789012-40789343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 127
               

               Conread position:
               192-520
               

               Cow position:
               chrX:41673911-41674245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               30, 183
               

               Conread position:
               192-520
               

               Cow position:
               chrX:46532702-46532355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               192-521
               

               Cow position:
               chrX:4633043-4632714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               102, 52
               

               Conread position:
               192-521
               

               Cow position:
               chrX:14599337-14599673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 204
               

               Conread position:
               192-521
               

               Cow position:
               chrX:21593091-21593428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               80, 184
               

               Conread position:
               192-521
               

               Cow position:
               chrX:29289384-29289719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               46, 41
               

               Conread position:
               192-521
               

               Cow position:
               chrX:31250197-31250529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               77, 102
               

               Conread position:
               192-521
               

               Cow position:
               chrX:33000711-33001047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               77, 89
               

               Conread position:
               192-523
               

               Cow position:
               chrX:7646068-7646399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               261, 56
               

               Conread position:
               192-523
               

               Cow position:
               chrX:19930463-19930786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               287, 81
               

               Conread position:
               192-523
               

               Cow position:
               chrX:42011087-42011424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 113
               

               Conread position:
               192-524
               

               Cow position:
               chrX:878564-878236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 17
               

               Conread position:
               192-524
               

               Cow position:
               chrX:5872121-5872461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               81, 160
               

               Conread position:
               192-524
               

               Cow position:
               chrX:6413854-6414185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 28
               

               Conread position:
               192-524
               

               Cow position:
               chrX:11655896-11656225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 183
               

               Conread position:
               192-524
               

               Cow position:
               chrX:12309582-12309242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               11, 94
               

               Conread position:
               192-524
               

               Cow position:
               chrX:12980023-12979690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 151
               

               Conread position:
               192-524
               

               Cow position:
               chrX:17630995-17630657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               61, 77
               

               Conread position:
               192-524
               

               Cow position:
               chrX:27174803-27175142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               103, 69
               

               Conread position:
               192-524
               

               Cow position:
               chrX:27446496-27446830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               61, 187
               

               Conread position:
               192-524
               

               Cow position:
               chrX:27705397-27705730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               102, 44
               

               Conread position:
               192-524
               

               Cow position:
               chrX:38963914-38964252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               130, 80
               

               Conread position:
               192-524
               

               Cow position:
               chrX:41879127-41878790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               53, 62
               

               Conread position:
               192-524
               

               Cow position:
               chrX:42247376-42247038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 80
               

               Conread position:
               192-525
               

               Cow position:
               chrX:4768558-4768877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               179, 50
               

               Conread position:
               192-525
               

               Cow position:
               chrX:6278698-6278353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 205
               

               Conread position:
               192-525
               

               Cow position:
               chrX:7695567-7695893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 42
               

               Conread position:
               192-525
               

               Cow position:
               chrX:43780045-43779707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               53, 189
               

               Conread position:
               192-525
               

               Cow position:
               chrX:45598796-45598460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 99
               

               Conread position:
               192-525
               

               Cow position:
               chrX:47054719-47054380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               106, 26
               

               Conread position:
               192-526
               

               Cow position:
               chrX:8925513-8925843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               259, 59
               

               Conread position:
               192-526
               

               Cow position:
               chrX:17662789-17662452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 194
               

               Conread position:
               192-526
               

               Cow position:
               chrX:29602025-29601682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 194
               

               Conread position:
               192-526
               

               Cow position:
               chrX:32623390-32623716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               198, 80
               

               Conread position:
               192-526
               

               Cow position:
               chrX:37489538-37489864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               192-526
               

               Cow position:
               chrX:44961555-44961897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               103, 185
               

               Conread position:
               192-527
               

               Cow position:
               chrX:4044043-4043720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 80
               

               Conread position:
               192-527
               

               Cow position:
               chrX:9635373-9635045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               84, 53
               

               Conread position:
               192-527
               

               Cow position:
               chrX:15147379-15147049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               192-527
               

               Cow position:
               chrX:17794793-17795130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               259, 69
               

               Conread position:
               192-527
               

               Cow position:
               chrX:38642065-38642395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 127
               

               Conread position:
               192-527
               

               Cow position:
               chrX:39938715-39938385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               82, 108
               

               Conread position:
               192-527
               

               Cow position:
               chrX:43527311-43527655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               103, 71
               

               Conread position:
               192-527
               

               Cow position:
               chrX:45113436-45113767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               108, 45
               

               Conread position:
               192-527
               

               Cow position:
               chrX:45430209-45429876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 73
               

               Conread position:
               192-528
               

               Cow position:
               chrX:151709-152048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               192-528
               

               Cow position:
               chrX:619200-618862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 187
               

               Conread position:
               192-528
               

               Cow position:
               chrX:7513322-7513632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               192-528
               

               Cow position:
               chrX:7718662-7718980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 149
               

               Conread position:
               192-528
               

               Cow position:
               chrX:7721792-7722136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 130
               

               Conread position:
               192-528
               

               Cow position:
               chrX:8797055-8797397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               192-528
               

               Cow position:
               chrX:8869601-8869253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 114
               

               Conread position:
               192-528
               

               Cow position:
               chrX:9201354-9201696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 186
               

               Conread position:
               192-528
               

               Cow position:
               chrX:10252374-10252051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               79, 10
               

               Conread position:
               192-528
               

               Cow position:
               chrX:11717975-11717635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 54
               

               Conread position:
               192-528
               

               Cow position:
               chrX:12249614-12249955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               185, 37
               

               Conread position:
               192-528
               

               Cow position:
               chrX:13382133-13382473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 195
               

               Conread position:
               192-528
               

               Cow position:
               chrX:13647976-13647637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               192-528
               

               Cow position:
               chrX:14973927-14973598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               25, 52
               

               Conread position:
               192-528
               

               Cow position:
               chrX:17888598-17888275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               257, 31
               

               Conread position:
               192-528
               

               Cow position:
               chrX:20340083-20339746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               240
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               81, 50
               

               Conread position:
               192-528
               

               Cow position:
               chrX:20697800-20697461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               42, 161
               

               Conread position:
               192-528
               

               Cow position:
               chrX:22074608-22074948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 61
               

               Conread position:
               192-528
               

               Cow position:
               chrX:23091689-23092021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               60, 78
               

               Conread position:
               192-528
               

               Cow position:
               chrX:23497857-23497544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               192-528
               

               Cow position:
               chrX:23514210-23513874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 10
               

               Conread position:
               192-528
               

               Cow position:
               chrX:25035580-25035232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               79, 200
               

               Conread position:
               192-528
               

               Cow position:
               chrX:27394206-27393878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               266, 68
               

               Conread position:
               192-528
               

               Cow position:
               chrX:27772152-27771818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               192-528
               

               Cow position:
               chrX:28878352-28878026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               7, 46
               

               Conread position:
               192-528
               

               Cow position:
               chrX:30963064-30962728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 45
               

               Conread position:
               192-528
               

               Cow position:
               chrX:31443014-31442680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               103, 73
               

               Conread position:
               192-528
               

               Cow position:
               chrX:32329968-32330318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               103, 15
               

               Conread position:
               192-528
               

               Cow position:
               chrX:33493582-33493923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 114
               

               Conread position:
               192-528
               

               Cow position:
               chrX:33639779-33640123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               103, 66
               

               Conread position:
               192-528
               

               Cow position:
               chrX:34401805-34402154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 48
               

               Conread position:
               192-528
               

               Cow position:
               chrX:34411648-34411994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 185
               

               Conread position:
               192-528
               

               Cow position:
               chrX:34532336-34532665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 48
               

               Conread position:
               192-528
               

               Cow position:
               chrX:34543595-34543932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               110, 27
               

               Conread position:
               192-528
               

               Cow position:
               chrX:35542699-35543035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 188
               

               Conread position:
               192-528
               

               Cow position:
               chrX:36975757-36976099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               103, 66
               

               Conread position:
               192-528
               

               Cow position:
               chrX:37781310-37780960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 191
               

               Conread position:
               192-528
               

               Cow position:
               chrX:37836395-37836726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               103, 176
               

               Conread position:
               192-528
               

               Cow position:
               chrX:38006960-38006623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 183
               

               Conread position:
               192-528
               

               Cow position:
               chrX:38094718-38094371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 29
               

               Conread position:
               192-528
               

               Cow position:
               chrX:40557868-40557528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 50
               

               Conread position:
               192-528
               

               Cow position:
               chrX:41238558-41238207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               108, 80
               

               Conread position:
               192-528
               

               Cow position:
               chrX:41526716-41526381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               192-528
               

               Cow position:
               chrX:41884610-41884264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 187
               

               Conread position:
               192-528
               

               Cow position:
               chrX:42086669-42086975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               80, 109
               

               Conread position:
               192-528
               

               Cow position:
               chrX:42171492-42171149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 183
               

               Conread position:
               192-528
               

               Cow position:
               chrX:42381292-42380964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 77
               

               Conread position:
               192-528
               

               Cow position:
               chrX:42492707-42492376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               105, 69
               

               Conread position:
               192-528
               

               Cow position:
               chrX:42994422-42994737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               81, 32
               

               Conread position:
               192-528
               

               Cow position:
               chrX:45501956-45502294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 123
               

               Conread position:
               192-528
               

               Cow position:
               chrX:46587625-46587970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               82, 65
               

               Conread position:
               193-343
               

               Cow position:
               chrX:29770370-29770215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               193-352
               

               Cow position:
               chrX:16541869-16541704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               193-357
               

               Cow position:
               chrX:46430049-46429888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               193-370
               

               Cow position:
               chrX:48684414-48684239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               102, 68
               

               Conread position:
               193-447
               

               Cow position:
               chrX:1055581-1055322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               183, 57
               

               Conread position:
               193-447
               

               Cow position:
               chrX:45404025-45403766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 189
               

               Conread position:
               193-514
               

               Cow position:
               chrX:34192486-34192790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               193-520
               

               Cow position:
               chrX:22821856-22822186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               82, 108
               

               Conread position:
               193-520
               

               Cow position:
               chrX:45845904-45846241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 186
               

               Conread position:
               193-521
               

               Cow position:
               chrX:28866184-28865865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               166, 34
               

               Conread position:
               193-524
               

               Cow position:
               chrX:1514592-1514275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               105, 57
               

               Conread position:
               193-526
               

               Cow position:
               chrX:7571715-7572052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 74
               

               Conread position:
               193-527
               

               Cow position:
               chrX:9416884-9416537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               80, 44
               

               Conread position:
               193-528
               

               Cow position:
               chrX:41192493-41192852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               258
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               79, 44
               

               Conread position:
               193-528
               

               Cow position:
               chrX:43730406-43730076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               259, 81
               

               Conread position:
               193-528
               

               Cow position:
               chrX:45414491-45414155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               255, 74
               

               Conread position:
               194-349
               

               Cow position:
               chrX:4123645-4123802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 57
               

               Conread position:
               194-365
               

               Cow position:
               chrX:25411646-25411821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               194-365
               

               Cow position:
               chrX:38967460-38967628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               102, 42
               

               Conread position:
               194-438
               

               Cow position:
               chrX:9855110-9855348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               70, 155
               

               Conread position:
               194-438
               

               Cow position:
               chrX:9953951-9954189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               71, 155
               

               Conread position:
               194-438
               

               Cow position:
               chrX:26440970-26440733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               100, 180
               

               Conread position:
               194-445
               

               Cow position:
               chrX:40826937-40826694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               89, 31
               

               Conread position:
               194-446
               

               Cow position:
               chrX:21642669-21642424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               71, 14
               

               Conread position:
               194-447
               

               Cow position:
               chrX:34238530-34238778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               103, 67
               

               Conread position:
               194-447
               

               Cow position:
               chrX:41167155-41166903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               75, 56
               

               Conread position:
               194-447
               

               Cow position:
               chrX:44657155-44656898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               78, 112
               

               Conread position:
               194-447
               

               Cow position:
               chrX:47144897-47145144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 111
               

               Conread position:
               194-495
               

               Cow position:
               chrX:26625867-26625556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 127
               

               Conread position:
               194-505
               

               Cow position:
               chrX:28111316-28111634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               128, 72
               

               Conread position:
               194-520
               

               Cow position:
               chrX:9252368-9252023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 40
               

               Conread position:
               194-524
               

               Cow position:
               chrX:31436292-31436618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 57
               

               Conread position:
               194-528
               

               Cow position:
               chrX:11633488-11633831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               97, 70
               

               Conread position:
               194-528
               

               Cow position:
               chrX:23785463-23785794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               77, 174
               

               Conread position:
               194-528
               

               Cow position:
               chrX:31311835-31312177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 149
               

               Conread position:
               194-528
               

               Cow position:
               chrX:33855423-33855072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 73
               

               Conread position:
               194-528
               

               Cow position:
               chrX:34441641-34441306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               81, 10
               

               Conread position:
               194-528
               

               Cow position:
               chrX:38549258-38549595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 107
               

               Conread position:
               194-528
               

               Cow position:
               chrX:40035635-40035292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 117
               

               Conread position:
               194-528
               

               Cow position:
               chrX:46073011-46072669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 49
               

               Conread position:
               195-357
               

               Cow position:
               chrX:24149450-24149613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               195-397
               

               Cow position:
               chrX:1505523-1505720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               101, 24
               

               Conread position:
               195-429
               

               Cow position:
               chrX:28836091-28835861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               172, 77
               

               Conread position:
               195-438
               

               Cow position:
               chrX:24105437-24105674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               100, 66
               

               Conread position:
               195-438
               

               Cow position:
               chrX:48236622-48236865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 184
               

               Conread position:
               195-447
               

               Cow position:
               chrX:5638359-5638110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               31, 123
               

               Conread position:
               195-447
               

               Cow position:
               chrX:26876072-26875822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               195-456
               

               Cow position:
               chrX:34754381-34754122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               77, 146
               

               Conread position:
               195-460
               

               Cow position:
               chrX:18999699-18999956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               78, 46
               

               Conread position:
               195-520
               

               Cow position:
               chrX:16416317-16416639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               74, 122
               

               Conread position:
               195-520
               

               Cow position:
               chrX:32743349-32743673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               128, 66
               

               Conread position:
               195-520
               

               Cow position:
               chrX:34565103-34565423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               193, 39
               

               Conread position:
               195-524
               

               Cow position:
               chrX:31489322-31489664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               92, 173
               

               Conread position:
               195-528
               

               Cow position:
               chrX:24424577-24424253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 67
               

               Conread position:
               196-353
               

               Cow position:
               chrX:45693918-45694070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               196-416
               

               Cow position:
               chrX:48370909-48371119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               78, 137
               

               Conread position:
               196-437
               

               Cow position:
               chrX:3654416-3654657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               69, 192
               

               Conread position:
               196-438
               

               Cow position:
               chrX:28845657-28845883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               105, 40
               

               Conread position:
               196-447
               

               Cow position:
               chrX:40809498-40809752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               196-447
               

               Cow position:
               chrX:46032910-46032668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               99, 80
               

               Conread position:
               196-514
               

               Cow position:
               chrX:7161883-7162190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               257, 12
               

               Conread position:
               196-527
               

               Cow position:
               chrX:42235722-42235376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               196-528
               

               Cow position:
               chrX:15007339-15007002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               77, 34
               

               Conread position:
               197-365
               

               Cow position:
               chrX:2383301-2383469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               197-368
               

               Cow position:
               chrX:21663121-21663288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               78, 112
               

               Conread position:
               197-528
               

               Cow position:
               chrX:8730892-8731241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               67, 312
               

               Conread position:
               198-371
               

               Cow position:
               chrX:31256681-31256852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               198-437
               

               Cow position:
               chrX:48035241-48035474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               73, 100
               

               Conread position:
               198-526
               

               Cow position:
               chrX:38218521-38218862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               74, 103
               

               Conread position:
               199-528
               

               Cow position:
               chrX:161236-161559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               249, 43
               

               Conread position:
               202-447
               

               Cow position:
               chrX:44054619-44054861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               98, 172
               

               Conread position:
               202-513
               

               Cow position:
               chrX:36067837-36068148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               246, 65
               

               Conread position:
               202-523
               

               Cow position:
               chrX:17541781-17542102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               248, 117
               

               Conread position:
               203-528
               

               Cow position:
               chrX:30543472-30543137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               66, 98
               

               Conread position:
               207-421
               

               Cow position:
               chrX:10095849-10096065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               69, 62
               

               Conread position:
               207-439
               

               Cow position:
               chrX:24288110-24287880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               59, 102
               

               Conread position:
               207-447
               

               Cow position:
               chrX:36060974-36061219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 168
               

               Conread position:
               207-514
               

               Cow position:
               chrX:16514442-16514133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               68, 38
               

               Conread position:
               207-519
               

               Cow position:
               chrX:29680438-29680122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               207-524
               

               Cow position:
               chrX:31252240-31252551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               207-528
               

               Cow position:
               chrX:7336649-7336988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               19, 56
               

               Conread position:
               208-437
               

               Cow position:
               chrX:45993042-45993277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               37, 72
               

               Conread position:
               209-520
               

               Cow position:
               chrX:4279290-4278980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               209-528
               

               Cow position:
               chrX:27145447-27145752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               5, 55
               

               Conread position:
               210-445
               

               Cow position:
               chrX:47873516-47873279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               66, 166
               

               Conread position:
               210-447
               

               Cow position:
               chrX:46146735-46146502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               211-412
               

               Cow position:
               chrX:9770858-9770652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               211-447
               

               Cow position:
               chrX:22465782-22466014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               211-528
               

               Cow position:
               chrX:22387421-22387102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               30, 166
               

               Conread position:
               211-528
               

               Cow position:
               chrX:34376782-34377090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               237, 55
               

               Conread position:
               211-528
               

               Cow position:
               chrX:35885903-35885579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               90, 50
               

               Conread position:
               212-428
               

               Cow position:
               chrX:37750426-37750214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 77
               

               Conread position:
               212-514
               

               Cow position:
               chrX:4996434-4996721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               242, 30
               

               Conread position:
               212-528
               

               Cow position:
               chrX:6407376-6407691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               215, 113
               

               Conread position:
               212-528
               

               Cow position:
               chrX:46433310-46433642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               60, 172
               

               Conread position:
               213-526
               

               Cow position:
               chrX:4398954-4399265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 125
               

               Conread position:
               213-528
               

               Cow position:
               chrX:34792482-34792165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 161
               

               Conread position:
               214-358
               

               Cow position:
               chrX:25208017-25207868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               214-447
               

               Cow position:
               chrX:22921143-22921380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               215-447
               

               Cow position:
               chrX:30133498-30133259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               215-528
               

               Cow position:
               chrX:40269315-40269642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 173
               

               Conread position:
               216-382
               

               Cow position:
               chrX:14003813-14003644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               219-502
               

               Cow position:
               chrX:41992207-41991930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               76, 23
               

               Conread position:
               219-527
               

               Cow position:
               chrX:44396856-44397157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               233, 44
               

               Conread position:
               219-528
               

               Cow position:
               chrX:14275901-14275595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               221-514
               

               Cow position:
               chrX:27206636-27206934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               221-523
               

               Cow position:
               chrX:41068564-41068868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               173, 21
               

               Conread position:
               226-528
               

               Cow position:
               chrX:36355957-36356253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               223, 39
               

               Conread position:
               228-447
               

               Cow position:
               chrX:27946216-27945995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 142
               

               Conread position:
               229-424
               

               Cow position:
               chrX:35969238-35969050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               72, 40
               

               Conread position:
               234-527
               

               Cow position:
               chrX:25193505-25193805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               11, 113
               

               Conread position:
               239-370
               

               Cow position:
               chrX:10366375-10366241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               239-428
               

               Cow position:
               chrX:36723240-36723049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               34, 141
               

               Conread position:
               239-520
               

               Cow position:
               chrX:39415515-39415230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               239-528
               

               Cow position:
               chrX:5118651-5118349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 114
               

               Conread position:
               240-422
               

               Cow position:
               chrX:10278666-10278845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               55, 83
               

               Conread position:
               240-458
               

               Cow position:
               chrX:12405535-12405312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 153
               

               Conread position:
               240-525
               

               Cow position:
               chrX:20584174-20584473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               240-528
               

               Cow position:
               chrX:27227974-27228275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               5, 145
               

               Conread position:
               241-511
               

               Cow position:
               chrX:38066597-38066324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               244-438
               

               Cow position:
               chrX:29723597-29723790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 132
               

               Conread position:
               244-520
               

               Cow position:
               chrX:5919352-5919637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               244-528
               

               Cow position:
               chrX:11085201-11084915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               29, 120
               

               Conread position:
               244-528
               

               Cow position:
               chrX:21986436-21986144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               29, 131
               

               Conread position:
               244-528
               

               Cow position:
               chrX:34313889-34314172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               204, 35
               

               Conread position:
               244-528
               

               Cow position:
               chrX:41870933-41871214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               207, 23
               

               Conread position:
               244-528
               

               Cow position:
               chrX:42873249-42873533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 5
               

               Conread position:
               245-519
               

               Cow position:
               chrX:19878907-19879179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               211, 75
               

               Conread position:
               245-525
               

               Cow position:
               chrX:11614556-11614838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 133
               

               Conread position:
               247-447
               

               Cow position:
               chrX:21566261-21566466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               24, 134
               

               Conread position:
               247-525
               

               Cow position:
               chrX:9365815-9365531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               27, 118
               

               Conread position:
               247-528
               

               Cow position:
               chrX:7710680-7710391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               248-447
               

               Cow position:
               chrX:27685107-27685307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 139
               

               Conread position:
               249-528
               

               Cow position:
               chrX:616401-616112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 130
               

               Conread position:
               251-508
               

               Cow position:
               chrX:19273854-19273579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 16
               

               Conread position:
               251-528
               

               Cow position:
               chrX:41027020-41027307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               21, 53
               

               Conread position:
               253-520
               

               Cow position:
               chrX:37986098-37986365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               22, 72
               

               Conread position:
               253-521
               

               Cow position:
               chrX:37955698-37955988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 86
               

               Conread position:
               253-528
               

               Cow position:
               chrX:48014306-48014583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               256-528
               

               Cow position:
               chrX:40685463-40685180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 123
               

               Conread position:
               257-520
               

               Cow position:
               chrX:45670099-45670362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               197, 43
               

               Conread position:
               263-518
               

               Cow position:
               chrX:30338064-30337819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               192, 41
               

               Conread position:
               270-511
               

               Cow position:
               chrX:43567807-43568050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               183, 103
               

               Conread position:
               271-528
               

               Cow position:
               chrX:23562521-23562780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               186, 76
               

               Conread position:
               273-514
               

               Cow position:
               chrX:19003188-19003412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               273-521
               

               Cow position:
               chrX:24331666-24331917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 111
               

               Conread position:
               273-525
               

               Cow position:
               chrX:13853510-13853766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 9
               

               Conread position:
               273-527
               

               Cow position:
               chrX:33539053-33539317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 92
               

               Conread position:
               273-527
               

               Cow position:
               chrX:45976808-45977073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               273-528
               

               Cow position:
               chrX:5679678-5679424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               30, 82
               

               Conread position:
               273-528
               

               Cow position:
               chrX:9651137-9650876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               168, 68
               

               Conread position:
               273-528
               

               Cow position:
               chrX:26881680-26881416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               273-528
               

               Cow position:
               chrX:38654542-38654293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               94, 41
               

               Conread position:
               273-528
               

               Cow position:
               chrX:38728625-38728882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               28, 100
               

               Conread position:
               273-528
               

               Cow position:
               chrX:42927931-42927676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               181, 103
               

               Conread position:
               273-528
               

               Cow position:
               chrX:43115039-43115298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               274-514
               

               Cow position:
               chrX:23940136-23939915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               130, 24
               

               Conread position:
               274-526
               

               Cow position:
               chrX:29194123-29194376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               177, 60
               

               Conread position:
               274-528
               

               Cow position:
               chrX:46291028-46291292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               175, 9
               

               Conread position:
               275-528
               

               Cow position:
               chrX:34505157-34504902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               100, 56
               

               Conread position:
               276-513
               

               Cow position:
               chrX:29229901-29230132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               111, 92
               

               Conread position:
               278-438
               

               Cow position:
               chrX:45875284-45875442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               23, 88
               

               Conread position:
               281-518
               

               Cow position:
               chrX:48044618-48044378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 96
               

               Conread position:
               283-528
               

               Cow position:
               chrX:16348672-16348425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 225
               

               Conread position:
               289-528
               

               Cow position:
               chrX:34837150-34836916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               168, 36
               

               Conread position:
               290-527
               

               Cow position:
               chrX:38560462-38560706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               44, 75
               

               Conread position:
               293-445
               

               Cow position:
               chrX:45648781-45648931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               293-523
               

               Cow position:
               chrX:1466069-1466305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               158, 83
               

               Conread position:
               294-528
               

               Cow position:
               chrX:918818-918565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               135, 82
               

               Conread position:
               294-528
               

               Cow position:
               chrX:29050156-29050396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               300-524
               

               Cow position:
               chrX:18273143-18272915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               153, 211
               

               Conread position:
               302-524
               

               Cow position:
               chrX:36514977-36514749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 62
               

               Conread position:
               305-528
               

               Cow position:
               chrX:39220000-39220227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               306-528
               

               Cow position:
               chrX:22115396-22115168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               12, 71
               

               Conread position:
               306-528
               

               Cow position:
               chrX:23113199-23113434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               66, 29
               

               Conread position:
               307-524
               

               Cow position:
               chrX:4515606-4515835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               133, 77
               

               Conread position:
               310-527
               

               Cow position:
               chrX:6463535-6463745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 50
               

               Conread position:
               311-528
               

               Cow position:
               chrX:12437343-12437124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               143, 17
               

               Conread position:
               314-438
               

               Cow position:
               chrX:22887400-22887531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               37, 125
               

               Conread position:
               315-524
               

               Cow position:
               chrX:1088206-1087999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               138, 32
               

               Conread position:
               315-528
               

               Cow position:
               chrX:4153105-4152883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               318-524
               

               Cow position:
               chrX:46429888-46429675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               319-512
               

               Cow position:
               chrX:12082391-12082192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               77, 71
               

               Conread position:
               323-450
               

               Cow position:
               chrX:44569022-44569146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               328-518
               

               Cow position:
               chrX:19469563-19469370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               123, 48
               

               Conread position:
               328-528
               

               Cow position:
               chrX:31627038-31626829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               329-528
               

               Cow position:
               chrX:32978133-32977938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               116, 47
               

               Conread position:
               331-524
               

               Cow position:
               chrX:35985764-35985961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               108, 54
               

               Conread position:
               336-519
               

               Cow position:
               chrX:19943286-19943097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               336-524
               

               Cow position:
               chrX:22393035-22392841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               117, 40
               

               Conread position:
               340-509
               

               Cow position:
               chrX:29585075-29585248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               113, 36
               

               Conread position:
               341-514
               

               Cow position:
               chrX:2523722-2523548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               112, 35
               

               Conread position:
               341-528
               

               Cow position:
               chrX:6599828-6599634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               113, 35
               

               Conread position:
               342-528
               

               Cow position:
               chrX:11326143-11325951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               57, 36
               

               Conread position:
               344-514
               

               Cow position:
               chrX:24749046-24749219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               109, 38
               

               Conread position:
               345-520
               

               Cow position:
               chrX:27306412-27306594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               109, 40
               

               Conread position:
               345-528
               

               Cow position:
               chrX:40532084-40531895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               106, 31
               

               Conread position:
               346-523
               

               Cow position:
               chrX:29553246-29553428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               104, 13
               

               Conread position:
               367-528
               

               Cow position:
               chrX:16836306-16836141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               371-527
               

               Cow position:
               chrX:16984623-16984787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               8, 130
               

               Conread position:
               378-528
               

               Cow position:
               chrX:45699981-45699827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               379-525
               

               Cow position:
               chrX:4466958-4467113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               379-528
               

               Cow position:
               chrX:42160618-42160771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               386-528
               

               Cow position:
               chrX:42479831-42479982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               388-528
               

               Cow position:
               chrX:27668958-27668810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               404-520
               

               Cow position:
               chrX:41164630-41164751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               414-528
               

               Cow position:
               chrX:23359085-23358966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.
Conread position:	115-446
Cow position:	chrX:13785627-13785302 (view UCSC Genome Browser custom track)
Alignm length:	336
Alignm identity:	244
Alignm E-value:	0
Alignm gaps (pig, cow):	93, 33
Conread position:	155-508
Cow position:	chrX:47186548-47186199 (view UCSC Genome Browser custom track)
Alignm length:	364
Alignm identity:	239
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	139, 50
Conread position:	180-431
Cow position:	chrX:3489089-3488845 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	172
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	65, 50
Conread position:	182-528
Cow position:	chrX:35383224-35382889 (view UCSC Genome Browser custom track)
Alignm length:	354
Alignm identity:	236
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	20, 152
Conread position:	183-521
Cow position:	chrX:32820828-32821169 (view UCSC Genome Browser custom track)
Alignm length:	350
Alignm identity:	243
Alignm E-value:	1.99993e-41
Alignm gaps (pig, cow):	21, 13
Conread position:	187-397
Cow position:	chrX:10373113-10373325 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	156
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	37, 140
Conread position:	188-437
Cow position:	chrX:40116225-40116466 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	174
Alignm E-value:	6e-30
Alignm gaps (pig, cow):	244, 77
Conread position:	188-438
Cow position:	chrX:25232394-25232643 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	179
Alignm E-value:	8e-33
Alignm gaps (pig, cow):	83, 67
Conread position:	188-447
Cow position:	chrX:39126140-39126385 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	179
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	77, 39
Conread position:	189-350
Cow position:	chrX:7806184-7806345 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	121
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	86, 19
Conread position:	189-365
Cow position:	chrX:160230-160052 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	129
Alignm E-value:	9e-23
Alignm gaps (pig, cow):	81, 63
Conread position:	189-374
Cow position:	chrX:25571189-25571007 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	131
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	125, 72
Conread position:	189-384
Cow position:	chrX:13191739-13191546 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	145
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	74, 84
Conread position:	189-389
Cow position:	chrX:24200994-24201191 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	146
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	134, 14
Conread position:	189-404
Cow position:	chrX:8991692-8991901 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	152
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	107, 46
Conread position:	189-408
Cow position:	chrX:28097929-28098135 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	158
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	89, 35
Conread position:	189-428
Cow position:	chrX:12115844-12116087 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	169
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	83, 46
Conread position:	189-432
Cow position:	chrX:36250057-36249817 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	168
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	107, 66
Conread position:	189-433
Cow position:	chrX:10866063-10865829 (view UCSC Genome Browser custom track)
Alignm length:	248
Alignm identity:	174
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	47, 79
Conread position:	189-437
Cow position:	chrX:31340509-31340760 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	178
Alignm E-value:	4e-36
Alignm gaps (pig, cow):	81, 220