Cow genome map

Conread name: Ss1.1-rpigcf0_011841.5.5

Conread position: 1-113
Cow position: chr12:46163792-46163903 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-114
Cow position: chr12:42194687-42194798 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-119
Cow position: chr12:24992770-24992653 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-119
Cow position: chr12:35473483-35473366 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 1-137
Cow position: chr12:24696598-24696733 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 1-140
Cow position: chr12:34514599-34514461 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 1-148
Cow position: chr12:26870360-26870507 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 17

Conread position: 1-167
Cow position: chr12:1886299-1886141 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 1-168
Cow position: chr12:21391971-21391804 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr12:1491219-1491388 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 1-171
Cow position: chr12:5327857-5327688 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 1-171
Cow position: chr12:5777077-5776908 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 1-171
Cow position: chr12:6441789-6441620 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 1-171
Cow position: chr12:21010426-21010257 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 142
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 1-171
Cow position: chr12:23512126-23511956 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 105, 18

Conread position: 1-171
Cow position: chr12:27614468-27614637 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 138
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 1-171
Cow position: chr12:29128309-29128141 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 141
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 1-248
Cow position: chr12:23152681-23152439 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 149, 17

Conread position: 1-250
Cow position: chr12:45145105-45145367 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 18

Conread position: 1-253
Cow position: chr12:34176417-34176682 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 19

Conread position: 1-271
Cow position: chr12:1437962-1438244 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 18

Conread position: 1-273
Cow position: chr12:19040666-19040951 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 171, 20

Conread position: 1-283
Cow position: chr12:551762-551471 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 17

Conread position: 1-288
Cow position: chr12:8675013-8674714 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 17

Conread position: 1-288
Cow position: chr12:42232362-42232662 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-292
Cow position: chr12:23521110-23520815 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 170, 17

Conread position: 1-306
Cow position: chr12:487722-488027 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 202
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 181, 17

Conread position: 1-327
Cow position: chr12:35161660-35162018 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 18

Conread position: 1-350
Cow position: chr12:27929739-27929370 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 17

Conread position: 1-351
Cow position: chr12:35367458-35367820 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 17

Conread position: 1-352
Cow position: chr12:15796983-15797336 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 17

Conread position: 1-366
Cow position: chr12:2242932-2242555 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 15

Conread position: 1-372
Cow position: chr12:32340204-32339815 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-379
Cow position: chr12:21888990-21888594 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-392
Cow position: chr12:62155-61746 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-392
Cow position: chr12:33925645-33925236 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-394
Cow position: chr12:47803224-47803616 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 17

Conread position: 1-400
Cow position: chr12:1395761-1395361 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 259
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 21

Conread position: 1-400
Cow position: chr12:25143673-25143259 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 277
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 77, 18

Conread position: 1-402
Cow position: chr12:19971815-19972213 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 272
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 130, 17

Conread position: 1-405
Cow position: chr12:23099995-23099571 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 17

Conread position: 1-405
Cow position: chr12:30501693-30502107 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 17

Conread position: 1-409
Cow position: chr12:1774865-1774436 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 18

Conread position: 1-413
Cow position: chr12:28737578-28738006 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 294
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 172, 17

Conread position: 1-414
Cow position: chr12:30686793-30687225 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 17

Conread position: 1-414
Cow position: chr12:31829397-31828965 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-419
Cow position: chr12:21130094-21130512 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 279
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 89, 17

Conread position: 1-421
Cow position: chr12:21719124-21718681 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 17

Conread position: 1-421
Cow position: chr12:27994153-27994592 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-421
Cow position: chr12:32088319-32088726 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 18

Conread position: 1-421
Cow position: chr12:42193266-42193703 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 289
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 87, 17

Conread position: 1-422
Cow position: chr12:19871267-19871706 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 17

Conread position: 1-422
Cow position: chr12:21665188-21665628 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-422
Cow position: chr12:22202615-22202190 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 17

Conread position: 1-422
Cow position: chr12:28763947-28763524 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 7

Conread position: 1-422
Cow position: chr12:32147575-32147138 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-422
Cow position: chr12:36287960-36287523 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-422
Cow position: chr12:38893416-38893856 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 19

Conread position: 1-422
Cow position: chr12:48416692-48416251 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-423
Cow position: chr12:1405501-1405940 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-423
Cow position: chr12:17718353-17718792 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-423
Cow position: chr12:23138276-23137835 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-423
Cow position: chr12:31027768-31027327 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 1-424
Cow position: chr12:250260-249827 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 17

Conread position: 1-424
Cow position: chr12:1007068-1007510 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:1056455-1056015 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:1511711-1511271 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:3180468-3180903 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 17

Conread position: 1-424
Cow position: chr12:5107110-5107552 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:5111008-5110570 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:6106296-6105875 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 18

Conread position: 1-424
Cow position: chr12:7673954-7674396 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:8839305-8839748 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 1-424
Cow position: chr12:10358748-10359191 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:12928854-12928416 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 18

Conread position: 1-424
Cow position: chr12:14423402-14423851 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 18

Conread position: 1-424
Cow position: chr12:14568762-14568330 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:15925699-15925259 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:16302286-16301844 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:18585725-18586167 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 17

Conread position: 1-424
Cow position: chr12:20459666-20459228 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-424
Cow position: chr12:21251259-21250820 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:22748267-22748710 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 18

Conread position: 1-424
Cow position: chr12:24980774-24981201 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 18

Conread position: 1-424
Cow position: chr12:25148565-25148124 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 19

Conread position: 1-424
Cow position: chr12:25266280-25265839 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:28013179-28012737 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:32757749-32758190 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:35162816-35163277 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 18

Conread position: 1-424
Cow position: chr12:35548074-35547641 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:37562062-37562498 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 18

Conread position: 1-424
Cow position: chr12:39930221-39930659 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr12:42605123-42604690 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 18

Conread position: 1-424
Cow position: chr12:46112065-46111623 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-425
Cow position: chr12:258782-259225 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-425
Cow position: chr12:2285328-2285759 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 17

Conread position: 1-425
Cow position: chr12:3717221-3716778 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-427
Cow position: chr12:21314377-21313934 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 17

Conread position: 1-430
Cow position: chr12:8641831-8642249 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 17

Conread position: 1-430
Cow position: chr12:9988634-9988197 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 17

Conread position: 1-430
Cow position: chr12:30141482-30141915 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 18

Conread position: 1-431
Cow position: chr12:1173957-1173516 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 312
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 120, 17

Conread position: 1-431
Cow position: chr12:7077449-7077021 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 285
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 185, 112

Conread position: 1-431
Cow position: chr12:10931138-10931587 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-431
Cow position: chr12:11582222-11582657 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 17

Conread position: 1-431
Cow position: chr12:15231087-15231528 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 1-431
Cow position: chr12:19155807-19155359 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-431
Cow position: chr12:21610656-21611098 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 19

Conread position: 1-431
Cow position: chr12:22593818-22594255 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 17

Conread position: 1-431
Cow position: chr12:25313661-25313212 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 45

Conread position: 1-431
Cow position: chr12:33296681-33297131 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 17

Conread position: 1-431
Cow position: chr12:43681057-43681505 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-432
Cow position: chr12:1407884-1408336 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 17

Conread position: 1-438
Cow position: chr12:5713016-5713477 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 17

Conread position: 1-439
Cow position: chr12:17969041-17969471 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-439
Cow position: chr12:21074889-21075337 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 17

Conread position: 2-247
Cow position: chr12:27852891-27852630 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 65, 16

Conread position: 2-354
Cow position: chr12:42856478-42856108 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 16

Conread position: 2-399
Cow position: chr12:1476606-1476194 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 16

Conread position: 2-424
Cow position: chr12:27958472-27958031 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 17

Conread position: 2-424
Cow position: chr12:32011725-32011283 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 17

Conread position: 2-430
Cow position: chr12:32220152-32220598 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 16

Conread position: 2-431
Cow position: chr12:758474-758906 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 16

Conread position: 2-431
Cow position: chr12:5226302-5226731 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 17

Conread position: 3-171
Cow position: chr12:21303483-21303650 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 3-336
Cow position: chr12:21862373-21862032 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 15

Conread position: 3-358
Cow position: chr12:35311858-35311481 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 3-374
Cow position: chr12:10486521-10486887 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 256
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 84, 16

Conread position: 3-409
Cow position: chr12:8773720-8774142 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 16

Conread position: 3-424
Cow position: chr12:11101303-11101742 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 15

Conread position: 3-424
Cow position: chr12:32656606-32657043 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 15

Conread position: 3-430
Cow position: chr12:32848627-32849062 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 15

Conread position: 4-329
Cow position: chr12:41595298-41595615 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 192, 14

Conread position: 4-424
Cow position: chr12:21904422-21904847 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 14

Conread position: 4-431
Cow position: chr12:15939806-15939378 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 17

Conread position: 6-171
Cow position: chr12:29486414-29486251 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 6-371
Cow position: chr12:4758774-4758402 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 240
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 71

Conread position: 6-386
Cow position: chr12:32284943-32285327 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 248
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 122

Conread position: 6-422
Cow position: chr12:21211841-21212275 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 13

Conread position: 6-422
Cow position: chr12:22517794-22517362 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 13

Conread position: 7-334
Cow position: chr12:32986592-32986908 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 139, 94

Conread position: 7-335
Cow position: chr12:15229394-15229736 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 221
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 161, 12

Conread position: 7-391
Cow position: chr12:21484470-21484862 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 11

Conread position: 8-171
Cow position: chr12:1343511-1343675 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 8-292
Cow position: chr12:40306358-40306655 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 154, 11

Conread position: 8-416
Cow position: chr12:8841997-8841574 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 32

Conread position: 8-424
Cow position: chr12:41338173-41337738 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 13

Conread position: 9-430
Cow position: chr12:6954399-6954813 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 81

Conread position: 10-171
Cow position: chr12:35347669-35347823 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 10-361
Cow position: chr12:20847200-20847562 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 8

Conread position: 12-171
Cow position: chr12:4830280-4830438 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 129, 54

Conread position: 12-171
Cow position: chr12:22566097-22566256 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 90

Conread position: 12-407
Cow position: chr12:3094569-3094146 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 13-432
Cow position: chr12:24557642-24558074 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 250

Conread position: 14-171
Cow position: chr12:32900857-32901013 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 14-406
Cow position: chr12:10164891-10164489 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 280
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 159, 7

Conread position: 16-299
Cow position: chr12:8626373-8626651 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 251, 23

Conread position: 16-299
Cow position: chr12:8628131-8627853 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 251, 23

Conread position: 16-400
Cow position: chr12:19198110-19198503 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 19

Conread position: 16-431
Cow position: chr12:17663027-17663451 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 67

Conread position: 17-168
Cow position: chr12:19248155-19248303 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 74, 29

Conread position: 17-420
Cow position: chr12:10637767-10638173 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 257
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 65

Conread position: 17-424
Cow position: chr12:25097198-25096773 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 370

Conread position: 17-424
Cow position: chr12:27506582-27506155 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 17-431
Cow position: chr12:17981477-17981895 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 84

Conread position: 17-431
Cow position: chr12:20994697-20994266 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 340

Conread position: 17-431
Cow position: chr12:27436077-27435664 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 36

Conread position: 17-438
Cow position: chr12:12755089-12754650 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 273

Conread position: 18-405
Cow position: chr12:42798076-42798458 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 257
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 123, 130

Conread position: 19-171
Cow position: chr12:1789575-1789423 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 19-391
Cow position: chr12:26823199-26823578 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 248
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 73

Conread position: 24-335
Cow position: chr12:42794998-42795319 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 135, 69

Conread position: 29-428
Cow position: chr12:21057632-21057211 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 234

Conread position: 34-424
Cow position: chr12:21452893-21452483 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 35-438
Cow position: chr12:4378547-4378148 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 264
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 42

Conread position: 40-431
Cow position: chr12:21497802-21497400 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 133, 61

Conread position: 40-436
Cow position: chr12:23378222-23378627 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 305

Conread position: 41-423
Cow position: chr12:10075753-10076151 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 203

Conread position: 43-431
Cow position: chr12:32354400-32354802 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 266
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 37

Conread position: 45-424
Cow position: chr12:24029384-24028989 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 46-422
Cow position: chr12:36569247-36568855 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 10

Conread position: 49-431
Cow position: chr12:15820830-15821220 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 311

Conread position: 49-431
Cow position: chr12:28571484-28571873 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 27

Conread position: 51-382
Cow position: chr12:36213380-36213729 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 66

Conread position: 53-424
Cow position: chr12:24447765-24447374 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 271
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 51, 24

Conread position: 58-431
Cow position: chr12:41973665-41973273 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 322

Conread position: 63-404
Cow position: chr12:23159388-23159041 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 90

Conread position: 63-424
Cow position: chr12:22979778-22979399 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 72-424
Cow position: chr12:551472-551119 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 324, 0

Conread position: 73-416
Cow position: chr12:1093025-1093383 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 342

Conread position: 77-424
Cow position: chr12:34176682-34177049 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 78-368
Cow position: chr12:23294363-23294670 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 168

Conread position: 79-427
Cow position: chr12:36445517-36445882 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 22

Conread position: 82-372
Cow position: chr12:7961609-7961305 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 80, 51

Conread position: 86-424
Cow position: chr12:31329194-31328835 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 89-430
Cow position: chr12:32676813-32676464 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 56

Conread position: 93-345
Cow position: chr12:21089796-21089525 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 93-422
Cow position: chr12:21432483-21432831 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 95-432
Cow position: chr12:12973110-12973444 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 102, 62

Conread position: 96-404
Cow position: chr12:5540050-5539744 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 192

Conread position: 96-431
Cow position: chr12:12178082-12177734 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 39, 30

Conread position: 98-407
Cow position: chr12:7885739-7885392 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 64, 0

Conread position: 98-424
Cow position: chr12:2228719-2229065 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 101-422
Cow position: chr12:13043090-13042749 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 112-431
Cow position: chr12:26870094-26869751 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 152

Conread position: 114-424
Cow position: chr12:15720398-15720072 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 143

Conread position: 119-432
Cow position: chr12:24205704-24206032 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 189

Conread position: 121-288
Cow position: chr12:43602085-43601904 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 121-316
Cow position: chr12:18936000-18936214 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 123-340
Cow position: chr12:39283330-39283107 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 81, 42

Conread position: 161-335
Cow position: chr12:1108341-1108515 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 75

Conread position: 161-431
Cow position: chr12:32483586-32483323 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 40

Conread position: 163-429
Cow position: chr12:31217412-31217676 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 133, 50

Conread position: 165-288
Cow position: chr12:21672581-21672705 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 165-413
Cow position: chr12:19852484-19852736 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 93

Conread position: 165-419
Cow position: chr12:31261181-31260922 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 254

Conread position: 165-422
Cow position: chr12:21946225-21946478 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 73

Conread position: 165-424
Cow position: chr12:3364113-3364381 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 176

Conread position: 165-424
Cow position: chr12:14214289-14214555 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 165-424
Cow position: chr12:25838511-25838778 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 172-414
Cow position: chr12:3070093-3070342 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 20

Conread position: 172-431
Cow position: chr12:10988592-10988855 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 56

Conread position: 173-431
Cow position: chr12:6186910-6186647 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 58

Conread position: 173-431
Cow position: chr12:8172144-8172406 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 174-402
Cow position: chr12:23441702-23441468 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 174-424
Cow position: chr12:1886102-1885846 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 190

Conread position: 174-424
Cow position: chr12:22480362-22480618 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 180-405
Cow position: chr12:1345316-1345553 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 187-430
Cow position: chr12:25365768-25365526 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 103, 28

Conread position: 190-390
Cow position: chr12:19861953-19862146 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 163
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 6, 98

Conread position: 200-431
Cow position: chr12:30011699-30011469 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 137
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 112, 124

Conread position: 202-414
Cow position: chr12:1501358-1501565 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 22

Conread position: 208-424
Cow position: chr12:10790974-10790752 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 208-424
Cow position: chr12:17787369-17787147 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 208-424
Cow position: chr12:23475025-23475244 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 30

Conread position: 208-431
Cow position: chr12:21557219-21557448 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 134

Conread position: 208-431
Cow position: chr12:30016798-30016576 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 115

Conread position: 211-431
Cow position: chr12:35135580-35135797 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 107

Conread position: 213-424
Cow position: chr12:1855581-1855365 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 25

Conread position: 217-390
Cow position: chr12:10490131-10490307 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 148
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 91, 0

Conread position: 218-402
Cow position: chr12:45540676-45540865 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 76, 0

Conread position: 218-424
Cow position: chr12:13766619-13766409 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 9

Conread position: 219-431
Cow position: chr12:747286-747499 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 71, 20

Conread position: 222-421
Cow position: chr12:25902671-25902460 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 123

Conread position: 222-423
Cow position: chr12:34659860-34659655 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 165

Conread position: 222-425
Cow position: chr12:34000980-34001186 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 42

Conread position: 224-409
Cow position: chr12:27573381-27573566 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 45

Conread position: 224-424
Cow position: chr12:22566607-22566813 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 224-424
Cow position: chr12:28840096-28840303 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 169

Conread position: 228-406
Cow position: chr12:19872861-19873044 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 232-405
Cow position: chr12:41965819-41965639 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 232-424
Cow position: chr12:32900856-32900658 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 233-405
Cow position: chr12:1994667-1994489 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 234-423
Cow position: chr12:29485362-29485164 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 60, 0

Conread position: 234-431
Cow position: chr12:24756246-24756044 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 63, 20

Conread position: 244-402
Cow position: chr12:9894614-9894452 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 50, 121

Conread position: 244-422
Cow position: chr12:32917638-32917822 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 245-431
Cow position: chr12:22286625-22286433 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 250-431
Cow position: chr12:5904846-5905032 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 152
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 52, 0

Conread position: 253-422
Cow position: chr12:44766149-44766323 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 44, 16

Conread position: 255-424
Cow position: chr12:14940284-14940459 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 255-431
Cow position: chr12:5800099-5800281 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 108

Conread position: 257-424
Cow position: chr12:21202149-21202324 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 257-424
Cow position: chr12:23039948-23039782 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 47

Conread position: 257-424
Cow position: chr12:26268895-26268722 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 258-424
Cow position: chr12:6529921-6530085 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 141, 21

Conread position: 258-424
Cow position: chr12:27852328-27852160 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 149

Conread position: 259-431
Cow position: chr12:5274041-5273864 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 43, 166

Conread position: 262-424
Cow position: chr12:30593780-30593614 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 138

Conread position: 262-427
Cow position: chr12:36149347-36149176 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 262-448
Cow position: chr12:10441881-10442071 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 103

Conread position: 263-424
Cow position: chr12:6404455-6404293 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 31

Conread position: 264-424
Cow position: chr12:25260420-25260258 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 264-424
Cow position: chr12:40867661-40867827 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 139
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 0

Conread position: 266-431
Cow position: chr12:14522708-14522877 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 49

Conread position: 266-431
Cow position: chr12:38774422-38774590 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 8, 0

Conread position: 267-424
Cow position: chr12:26333053-26333215 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 268-424
Cow position: chr12:465280-465116 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 269-403
Cow position: chr12:19040522-19040386 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 82

Conread position: 269-431
Cow position: chr12:47928438-47928600 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 9

Conread position: 270-432
Cow position: chr12:2512047-2511895 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 273-424
Cow position: chr12:32700103-32700259 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 273-431
Cow position: chr12:6686276-6686437 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 279-421
Cow position: chr12:20217838-20217989 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 280-413
Cow position: chr12:21723456-21723594 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 67

Conread position: 291-431
Cow position: chr12:28708263-28708123 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 293-417
Cow position: chr12:1849752-1849629 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 295-424
Cow position: chr12:7651470-7651345 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 295-425
Cow position: chr12:4004540-4004410 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 104, 37

Conread position: 295-431
Cow position: chr12:39611041-39610906 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 296-425
Cow position: chr12:48436305-48436167 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 297-424
Cow position: chr12:8674085-8673956 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 298-424
Cow position: chr12:8770129-8770255 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 298-424
Cow position: chr12:35459126-35459253 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 298-424
Cow position: chr12:47415173-47415299 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 101, 23

Conread position: 298-431
Cow position: chr12:37698106-37697971 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 298-431
Cow position: chr12:40514484-40514620 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 311-424
Cow position: chr12:3545032-3545146 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 0

Show alignments to all cow chromosomes.