Cow genome map

Conread name: Ss1.1-rpigcf0_011841.5.5

Conread position: 1-121
Cow position: chr24:6440898-6441017 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 1-124
Cow position: chr24:12697871-12697749 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 1-131
Cow position: chr24:44942641-44942769 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 1-140
Cow position: chr24:12578666-12578804 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 1-142
Cow position: chr24:30767710-30767850 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 121
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 46, 14

Conread position: 1-156
Cow position: chr24:19185299-19185453 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 1-156
Cow position: chr24:41670958-41671113 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 63, 17

Conread position: 1-167
Cow position: chr24:6339718-6339884 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 17

Conread position: 1-168
Cow position: chr24:7404915-7404749 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 1-170
Cow position: chr24:12264643-12264476 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 1-170
Cow position: chr24:14307349-14307515 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 1-170
Cow position: chr24:17545370-17545533 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 1-170
Cow position: chr24:35503822-35503653 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-171
Cow position: chr24:6963995-6964164 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 1-171
Cow position: chr24:25647922-25647755 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-171
Cow position: chr24:31842685-31842854 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 1-231
Cow position: chr24:12165012-12165241 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 165, 16

Conread position: 1-246
Cow position: chr24:14173619-14173361 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 160, 17

Conread position: 1-253
Cow position: chr24:9546317-9546582 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-259
Cow position: chr24:5653566-5653295 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 18

Conread position: 1-266
Cow position: chr24:6079570-6079849 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 17

Conread position: 1-282
Cow position: chr24:33240696-33240412 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 168, 18

Conread position: 1-286
Cow position: chr24:33775324-33775029 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 86, 17

Conread position: 1-336
Cow position: chr24:22287723-22288053 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 90, 17

Conread position: 1-355
Cow position: chr24:17323843-17324208 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-356
Cow position: chr24:12240022-12240398 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 168, 18

Conread position: 1-359
Cow position: chr24:16402239-16401871 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 81, 17

Conread position: 1-371
Cow position: chr24:17764454-17764070 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-375
Cow position: chr24:35067630-35067245 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 20

Conread position: 1-377
Cow position: chr24:36721588-36721984 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 17

Conread position: 1-392
Cow position: chr24:14745509-14745910 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 1-395
Cow position: chr24:12571056-12571477 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 279
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 172, 17

Conread position: 1-399
Cow position: chr24:28688575-28688972 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 17

Conread position: 1-400
Cow position: chr24:42938813-42938399 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 280
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 7, 18

Conread position: 1-401
Cow position: chr24:22820836-22821255 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 170, 18

Conread position: 1-406
Cow position: chr24:8431517-8431935 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 17

Conread position: 1-409
Cow position: chr24:7467151-7466742 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 15

Conread position: 1-409
Cow position: chr24:12203364-12202946 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 17

Conread position: 1-409
Cow position: chr24:27148255-27148680 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-410
Cow position: chr24:14336006-14336433 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 18

Conread position: 1-410
Cow position: chr24:36726301-36726724 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 17

Conread position: 1-411
Cow position: chr24:9861626-9861204 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 273
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 141, 20

Conread position: 1-412
Cow position: chr24:28497988-28497561 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 17

Conread position: 1-420
Cow position: chr24:40271992-40272426 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-421
Cow position: chr24:29084520-29084080 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 20

Conread position: 1-421
Cow position: chr24:35824056-35823621 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 17

Conread position: 1-422
Cow position: chr24:6068193-6067759 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 20

Conread position: 1-422
Cow position: chr24:6326226-6325786 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-423
Cow position: chr24:26274479-26274050 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 14

Conread position: 1-424
Cow position: chr24:207860-207409 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 18

Conread position: 1-424
Cow position: chr24:1841727-1841285 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:3162615-3163057 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:3793629-3794069 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-424
Cow position: chr24:3850740-3851182 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:5928924-5929365 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:5991038-5990601 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:6020933-6020492 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 19

Conread position: 1-424
Cow position: chr24:6036036-6035594 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 19

Conread position: 1-424
Cow position: chr24:7597414-7596976 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 19

Conread position: 1-424
Cow position: chr24:9549410-9549849 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 17

Conread position: 1-424
Cow position: chr24:11208462-11208020 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:12332567-12332120 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 17

Conread position: 1-424
Cow position: chr24:13191312-13191747 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:13491641-13492077 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:14194703-14194262 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:14352497-14352939 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:14376501-14376074 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 1-424
Cow position: chr24:15296260-15296702 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:16081342-16080898 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 18

Conread position: 1-424
Cow position: chr24:16559134-16558698 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 19

Conread position: 1-424
Cow position: chr24:17189129-17188687 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:18112602-18113042 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:19688434-19688001 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-424
Cow position: chr24:20367512-20367950 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:22794704-22795145 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:22953707-22954149 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 18

Conread position: 1-424
Cow position: chr24:22974952-22975395 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 259

Conread position: 1-424
Cow position: chr24:25372248-25372689 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 18

Conread position: 1-424
Cow position: chr24:25698090-25698524 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:26412197-26412633 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 8

Conread position: 1-424
Cow position: chr24:29190434-29190870 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 17

Conread position: 1-424
Cow position: chr24:31067900-31067458 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:31767094-31767514 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 280
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 17

Conread position: 1-424
Cow position: chr24:33937074-33937515 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 17

Conread position: 1-424
Cow position: chr24:34760677-34761096 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 17

Conread position: 1-424
Cow position: chr24:39055547-39055129 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 273
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 18

Conread position: 1-424
Cow position: chr24:40467268-40466826 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 17

Conread position: 1-424
Cow position: chr24:40551770-40552206 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-424
Cow position: chr24:41005624-41006056 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 17

Conread position: 1-425
Cow position: chr24:6412623-6413066 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-425
Cow position: chr24:27230179-27229747 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 286
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 133, 116

Conread position: 1-425
Cow position: chr24:32608451-32608899 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 17

Conread position: 1-429
Cow position: chr24:12348249-12347804 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 101

Conread position: 1-430
Cow position: chr24:16646763-16646344 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 17

Conread position: 1-430
Cow position: chr24:31381545-31381979 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 20

Conread position: 1-431
Cow position: chr24:6509008-6508543 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 327
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 159, 17

Conread position: 1-431
Cow position: chr24:12147445-12146995 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 1-431
Cow position: chr24:12199221-12198762 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 18

Conread position: 1-431
Cow position: chr24:16266608-16267041 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 17

Conread position: 1-431
Cow position: chr24:17105730-17105283 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 15

Conread position: 1-431
Cow position: chr24:17310287-17309831 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 17

Conread position: 1-431
Cow position: chr24:17365835-17365390 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 18

Conread position: 1-431
Cow position: chr24:18267346-18266899 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 17

Conread position: 1-431
Cow position: chr24:19643438-19643879 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 145

Conread position: 1-431
Cow position: chr24:20507901-20507455 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 298
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 171, 15

Conread position: 1-431
Cow position: chr24:26388740-26388315 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-431
Cow position: chr24:31301850-31302277 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-431
Cow position: chr24:32361700-32361266 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 20

Conread position: 1-431
Cow position: chr24:32740765-32740335 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 150

Conread position: 1-431
Cow position: chr24:32823949-32823534 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 18

Conread position: 1-431
Cow position: chr24:36028369-36027921 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 17

Conread position: 1-431
Cow position: chr24:36036681-36036237 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-431
Cow position: chr24:36779416-36779854 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-431
Cow position: chr24:37197571-37197129 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 291
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 101, 17

Conread position: 1-431
Cow position: chr24:39956958-39956516 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 17

Conread position: 1-431
Cow position: chr24:41062600-41063051 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 17

Conread position: 1-432
Cow position: chr24:9071696-9071251 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 20

Conread position: 1-433
Cow position: chr24:8607474-8607924 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 17

Conread position: 1-434
Cow position: chr24:40150241-40149794 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 55

Conread position: 1-438
Cow position: chr24:6052229-6052671 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 18

Conread position: 1-616
Cow position: chr24:6524140-6524789 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 17

Conread position: 2-262
Cow position: chr24:27724900-27724625 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 2-375
Cow position: chr24:45003574-45003952 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 16

Conread position: 2-397
Cow position: chr24:30893709-30893310 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 14

Conread position: 2-402
Cow position: chr24:6666635-6666218 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 284
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 78, 17

Conread position: 2-413
Cow position: chr24:14760039-14760469 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 20

Conread position: 2-414
Cow position: chr24:16908450-16908874 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 17

Conread position: 2-424
Cow position: chr24:12090125-12090566 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 16

Conread position: 2-425
Cow position: chr24:12119814-12119381 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 16

Conread position: 2-431
Cow position: chr24:5863206-5862760 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 16

Conread position: 2-431
Cow position: chr24:14147019-14146574 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 17

Conread position: 2-431
Cow position: chr24:16056713-16056273 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 151

Conread position: 3-288
Cow position: chr24:39680651-39680939 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 16

Conread position: 6-140
Cow position: chr24:27761075-27761209 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 97

Conread position: 6-431
Cow position: chr24:29179512-29179955 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 10

Conread position: 7-258
Cow position: chr24:9390302-9390569 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 171, 12

Conread position: 7-422
Cow position: chr24:45086679-45087108 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 11

Conread position: 7-431
Cow position: chr24:36556429-36555999 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 238

Conread position: 7-431
Cow position: chr24:43634269-43634707 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 11

Conread position: 8-168
Cow position: chr24:6542787-6542626 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 8-168
Cow position: chr24:24069962-24069804 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 93, 10

Conread position: 8-265
Cow position: chr24:35568149-35568410 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 10

Conread position: 8-317
Cow position: chr24:6543736-6544055 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 197

Conread position: 8-327
Cow position: chr24:24249349-24249017 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 10

Conread position: 8-419
Cow position: chr24:40120941-40120520 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 290
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 10, 45

Conread position: 8-424
Cow position: chr24:10575576-10575154 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 262
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 140

Conread position: 8-435
Cow position: chr24:42582364-42581964 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 285, 13

Conread position: 9-420
Cow position: chr24:37318394-37317992 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 270
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 179, 39

Conread position: 9-424
Cow position: chr24:39501440-39501010 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 14

Conread position: 10-166
Cow position: chr24:145449-145297 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 153, 8

Conread position: 10-425
Cow position: chr24:20284056-20283624 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 8

Conread position: 10-430
Cow position: chr24:34319107-34319545 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 291
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 8, 40

Conread position: 11-405
Cow position: chr24:7576666-7576257 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 265

Conread position: 11-430
Cow position: chr24:38813798-38814238 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 140

Conread position: 12-213
Cow position: chr24:4785845-4786061 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 12-424
Cow position: chr24:13235424-13235852 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 12-428
Cow position: chr24:37886497-37886931 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 7, 69

Conread position: 13-422
Cow position: chr24:13374359-13373930 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 130

Conread position: 13-431
Cow position: chr24:29181528-29181967 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 309
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 88, 70

Conread position: 17-117
Cow position: chr24:19885432-19885532 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 17-147
Cow position: chr24:24485036-24484907 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 17-408
Cow position: chr24:32849300-32849709 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 274
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 116, 74

Conread position: 17-410
Cow position: chr24:1067259-1066870 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 257
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 187, 101

Conread position: 17-422
Cow position: chr24:17566012-17566429 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 50

Conread position: 17-424
Cow position: chr24:17161818-17161391 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 18-171
Cow position: chr24:19199116-19199268 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 69, 59

Conread position: 18-431
Cow position: chr24:15371941-15372363 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 342

Conread position: 19-424
Cow position: chr24:30681960-30681546 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 19-431
Cow position: chr24:6271302-6271713 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 24

Conread position: 21-405
Cow position: chr24:36563108-36562731 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 257
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 154, 26

Conread position: 23-424
Cow position: chr24:2597552-2597948 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 254
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 182, 66

Conread position: 23-429
Cow position: chr24:9088938-9088530 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 65

Conread position: 26-429
Cow position: chr24:42815822-42816241 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 274
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 105, 0

Conread position: 29-123
Cow position: chr24:37099978-37100073 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 29-425
Cow position: chr24:40347902-40347489 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 114

Conread position: 30-424
Cow position: chr24:20603922-20604336 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 30-424
Cow position: chr24:22047894-22047482 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 79

Conread position: 34-409
Cow position: chr24:12038694-12039085 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 249
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 110, 291

Conread position: 35-438
Cow position: chr24:28601847-28601439 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 233

Conread position: 40-406
Cow position: chr24:14914646-14914273 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 245
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 134, 48

Conread position: 40-422
Cow position: chr24:38641561-38641954 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 133, 16

Conread position: 40-424
Cow position: chr24:18223298-18222892 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 40-424
Cow position: chr24:23052705-23052297 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 40-431
Cow position: chr24:7748809-7749215 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 304

Conread position: 41-353
Cow position: chr24:37076729-37076409 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 121, 59

Conread position: 45-430
Cow position: chr24:26847415-26847010 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 79

Conread position: 46-438
Cow position: chr24:33122116-33122527 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 150

Conread position: 51-424
Cow position: chr24:40428500-40428107 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 54-299
Cow position: chr24:16207840-16207598 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 87, 91

Conread position: 55-431
Cow position: chr24:10244349-10243968 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 35

Conread position: 56-424
Cow position: chr24:11104953-11104565 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 56-431
Cow position: chr24:31356801-31357179 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 40

Conread position: 59-374
Cow position: chr24:13496486-13496820 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 63-431
Cow position: chr24:15667541-15667155 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 84

Conread position: 73-231
Cow position: chr24:29069413-29069570 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 74-401
Cow position: chr24:41199952-41200280 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 215
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 236, 25

Conread position: 76-377
Cow position: chr24:25439419-25439743 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 257

Conread position: 76-402
Cow position: chr24:7960298-7959952 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 76-424
Cow position: chr24:33640265-33639911 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 71

Conread position: 78-422
Cow position: chr24:14250362-14249999 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 174

Conread position: 78-424
Cow position: chr24:40252860-40253222 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 96, 275

Conread position: 79-401
Cow position: chr24:29395132-29394795 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 68

Conread position: 80-431
Cow position: chr24:6415387-6415756 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 29

Conread position: 83-424
Cow position: chr24:38588008-38588369 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 323

Conread position: 86-377
Cow position: chr24:5279441-5279751 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 86-427
Cow position: chr24:40519373-40519023 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 31

Conread position: 88-415
Cow position: chr24:25992205-25991875 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 13, 62

Conread position: 90-431
Cow position: chr24:17406330-17406666 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 127, 43

Conread position: 93-424
Cow position: chr24:36307816-36308163 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 277

Conread position: 94-405
Cow position: chr24:11462774-11462439 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 80, 178

Conread position: 96-424
Cow position: chr24:32853451-32853799 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 97-423
Cow position: chr24:13000882-13000557 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 220
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 40

Conread position: 98-401
Cow position: chr24:17368684-17368361 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 186

Conread position: 98-424
Cow position: chr24:38296297-38296643 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 100-424
Cow position: chr24:9900614-9900958 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 101-430
Cow position: chr24:16474550-16474896 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 60, 114

Conread position: 103-431
Cow position: chr24:40036708-40036361 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 47

Conread position: 105-430
Cow position: chr24:21999181-21998847 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 115

Conread position: 105-431
Cow position: chr24:8885827-8885498 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 14

Conread position: 112-431
Cow position: chr24:28336802-28336470 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 141

Conread position: 116-424
Cow position: chr24:6442697-6443024 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 255

Conread position: 121-416
Cow position: chr24:2947824-2948138 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 122-424
Cow position: chr24:12696858-12696536 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 123-421
Cow position: chr24:14609599-14609293 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 47, 102

Conread position: 129-431
Cow position: chr24:36710114-36710432 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 151-428
Cow position: chr24:11426676-11426396 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 175

Conread position: 159-432
Cow position: chr24:42944341-42944084 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 135, 40

Conread position: 165-336
Cow position: chr24:36404641-36404816 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 9, 39

Conread position: 165-423
Cow position: chr24:45009506-45009771 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 129

Conread position: 165-424
Cow position: chr24:18741050-18740782 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 165-424
Cow position: chr24:39067548-39067281 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 167-436
Cow position: chr24:39258172-39258441 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 137, 98

Conread position: 171-409
Cow position: chr24:27761393-27761636 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 52

Conread position: 172-402
Cow position: chr24:41671186-41671422 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 172-431
Cow position: chr24:12991107-12991365 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 88

Conread position: 174-288
Cow position: chr24:14381101-14380986 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 174-424
Cow position: chr24:17544614-17544357 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 174-424
Cow position: chr24:30870639-30870382 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 176-424
Cow position: chr24:36268473-36268219 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 26, 0

Conread position: 177-422
Cow position: chr24:29064636-29064385 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 247

Conread position: 177-431
Cow position: chr24:30765654-30765916 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 178-431
Cow position: chr24:32759777-32759526 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 23, 57

Conread position: 189-431
Cow position: chr24:10852917-10852677 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 104, 66

Conread position: 192-424
Cow position: chr24:17295812-17295577 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 204

Conread position: 194-425
Cow position: chr24:40102362-40102599 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 200-428
Cow position: chr24:6542557-6542319 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 90, 216

Conread position: 200-431
Cow position: chr24:25677068-25677300 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 93, 154

Conread position: 202-395
Cow position: chr24:45217070-45216873 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 99, 24

Conread position: 202-411
Cow position: chr24:13299453-13299237 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 203-424
Cow position: chr24:27762603-27762831 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 75

Conread position: 203-431
Cow position: chr24:39482531-39482760 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 91, 35

Conread position: 207-431
Cow position: chr24:15793653-15793424 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 186

Conread position: 208-288
Cow position: chr24:20229692-20229772 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 73
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 208-424
Cow position: chr24:10035679-10035457 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 208-424
Cow position: chr24:11081415-11081193 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 88, 0

Conread position: 208-424
Cow position: chr24:11940126-11940348 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 208-424
Cow position: chr24:12446859-12447081 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 88, 0

Conread position: 209-431
Cow position: chr24:5910185-5910413 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 116

Conread position: 213-416
Cow position: chr24:14308147-14308360 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 209

Conread position: 213-431
Cow position: chr24:6340073-6340298 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 82, 0

Conread position: 214-431
Cow position: chr24:17752874-17752653 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 8

Conread position: 219-415
Cow position: chr24:32125576-32125364 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 221-375
Cow position: chr24:31815638-31815791 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 66

Conread position: 222-340
Cow position: chr24:30408797-30408917 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 222-422
Cow position: chr24:12377737-12377531 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 222-424
Cow position: chr24:27345517-27345309 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 223-417
Cow position: chr24:33053640-33053441 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 77, 52

Conread position: 223-422
Cow position: chr24:25424070-25424271 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 79, 53

Conread position: 223-428
Cow position: chr24:24485555-24485344 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 224-399
Cow position: chr24:40896860-40896678 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 224-406
Cow position: chr24:32304030-32303844 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 50

Conread position: 224-422
Cow position: chr24:16100176-16100374 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 40

Conread position: 224-431
Cow position: chr24:19466869-19466665 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 70, 113

Conread position: 224-431
Cow position: chr24:31758912-31758698 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 68, 0

Conread position: 226-426
Cow position: chr24:15675246-15675038 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 69, 29

Conread position: 227-405
Cow position: chr24:21058809-21058997 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 230-424
Cow position: chr24:144967-144767 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 233-431
Cow position: chr24:32359756-32359552 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 36

Conread position: 236-430
Cow position: chr24:25047059-25047249 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 239-431
Cow position: chr24:39902156-39901958 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 157
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 61, 0

Conread position: 242-422
Cow position: chr24:5608421-5608235 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 57, 0

Conread position: 243-422
Cow position: chr24:6148675-6148861 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 37, 83

Conread position: 246-420
Cow position: chr24:36131805-36131625 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 82

Conread position: 249-406
Cow position: chr24:19706644-19706807 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 251-424
Cow position: chr24:26794824-26795003 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 255-431
Cow position: chr24:31323363-31323538 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 154, 15

Conread position: 257-422
Cow position: chr24:39160444-39160275 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 258-431
Cow position: chr24:31370873-31370698 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 149

Conread position: 262-424
Cow position: chr24:15083997-15084166 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 264-389
Cow position: chr24:24500623-24500503 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 108
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 264-396
Cow position: chr24:39680940-39681069 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 266-424
Cow position: chr24:15880561-15880725 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 44

Conread position: 266-424
Cow position: chr24:35872799-35872638 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 33, 95

Conread position: 270-431
Cow position: chr24:25543758-25543603 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 271-431
Cow position: chr24:25110676-25110841 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 80

Conread position: 273-424
Cow position: chr24:38487693-38487846 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 127

Conread position: 280-432
Cow position: chr24:40129074-40129227 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 51

Conread position: 286-424
Cow position: chr24:19677865-19678004 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 110, 0

Conread position: 292-424
Cow position: chr24:12293146-12293279 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 293-424
Cow position: chr24:33239424-33239293 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 83

Conread position: 293-432
Cow position: chr24:39122900-39123040 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 296-424
Cow position: chr24:30767849-30767974 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 298-423
Cow position: chr24:14379040-14378915 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 27

Conread position: 298-424
Cow position: chr24:7782664-7782537 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 298-424
Cow position: chr24:11748649-11748522 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 299-424
Cow position: chr24:13117102-13117227 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 310-431
Cow position: chr24:17956461-17956340 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 106
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.