Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rpigcf0_011841.5.5
        

               Conread position:
               1-118
               

               Cow position:
               chr5:32954216-32954332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-138
               

               Cow position:
               chr5:6840332-6840196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-138
               

               Cow position:
               chr5:48055733-48055871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr5:6536649-6536513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-144
               

               Cow position:
               chr5:44482493-44482635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr5:60446046-60445901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-151
               

               Cow position:
               chr5:15316619-15316766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr5:30844718-30844873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr5:30360563-30360399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr5:2699284-2699116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               138
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr5:6615404-6615235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr5:7276722-7276890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               140
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr5:14631376-14631207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr5:16126933-16127102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               105, 17
               

               Conread position:
               1-171
               

               Cow position:
               chr5:37424613-37424785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 20
               

               Conread position:
               1-171
               

               Cow position:
               chr5:37610053-37609883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               150, 18
               

               Conread position:
               1-171
               

               Cow position:
               chr5:41952185-41952020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr5:45180199-45180029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               138, 18
               

               Conread position:
               1-171
               

               Cow position:
               chr5:54362187-54362356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr5:57336524-57336340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               135, 18
               

               Conread position:
               1-236
               

               Cow position:
               chr5:50675698-50675450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-241
               

               Cow position:
               chr5:39935975-39936207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               1-255
               

               Cow position:
               chr5:54867920-54868179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               172, 14
               

               Conread position:
               1-257
               

               Cow position:
               chr5:39216348-39216078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 18
               

               Conread position:
               1-264
               

               Cow position:
               chr5:38662221-38662497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 18
               

               Conread position:
               1-265
               

               Cow position:
               chr5:26624927-26624664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               69, 18
               

               Conread position:
               1-265
               

               Cow position:
               chr5:31098365-31098082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               1-265
               

               Cow position:
               chr5:52646663-52646401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               222, 17
               

               Conread position:
               1-265
               

               Cow position:
               chr5:66909993-66910270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-274
               

               Cow position:
               chr5:11358015-11358301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-278
               

               Cow position:
               chr5:30157249-30157539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-279
               

               Cow position:
               chr5:23642323-23642038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 17
               

               Conread position:
               1-283
               

               Cow position:
               chr5:72346222-72345914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               1-284
               

               Cow position:
               chr5:2695913-2695617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-288
               

               Cow position:
               chr5:10299357-10299657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-288
               

               Cow position:
               chr5:13630605-13630305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-288
               

               Cow position:
               chr5:65597320-65597614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               1-288
               

               Cow position:
               chr5:69770969-69771252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 17
               

               Conread position:
               1-297
               

               Cow position:
               chr5:27655638-27655921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-299
               

               Cow position:
               chr5:28571437-28571745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 18
               

               Conread position:
               1-299
               

               Cow position:
               chr5:47697307-47697005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               1-304
               

               Cow position:
               chr5:23957437-23957121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               165, 19
               

               Conread position:
               1-327
               

               Cow position:
               chr5:38848696-38848352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-335
               

               Cow position:
               chr5:7582408-7582084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               1-335
               

               Cow position:
               chr5:8479179-8479518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               157, 17
               

               Conread position:
               1-335
               

               Cow position:
               chr5:41356944-41356602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               1-338
               

               Cow position:
               chr5:2203502-2203147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-361
               

               Cow position:
               chr5:9091533-9091159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               1-373
               

               Cow position:
               chr5:24633150-24632760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-378
               

               Cow position:
               chr5:29458811-29459176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 17
               

               Conread position:
               1-386
               

               Cow position:
               chr5:59146266-59146669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-393
               

               Cow position:
               chr5:41954400-41954007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               188, 20
               

               Conread position:
               1-394
               

               Cow position:
               chr5:36907173-36906763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-395
               

               Cow position:
               chr5:35446726-35446329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 17
               

               Conread position:
               1-398
               

               Cow position:
               chr5:21827716-21828124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 19
               

               Conread position:
               1-398
               

               Cow position:
               chr5:26135384-26134964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               1-401
               

               Cow position:
               chr5:57124909-57125319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               279
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               195, 17
               

               Conread position:
               1-402
               

               Cow position:
               chr5:42507648-42508047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-402
               

               Cow position:
               chr5:70607202-70607609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               187, 17
               

               Conread position:
               1-405
               

               Cow position:
               chr5:25928809-25928390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               1-407
               

               Cow position:
               chr5:27490864-27491290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 19
               

               Conread position:
               1-407
               

               Cow position:
               chr5:41411549-41411124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-409
               

               Cow position:
               chr5:49970728-49971136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               384, 18
               

               Conread position:
               1-410
               

               Cow position:
               chr5:6572350-6571935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 222
               

               Conread position:
               1-410
               

               Cow position:
               chr5:57363892-57363481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               80, 94
               

               Conread position:
               1-414
               

               Cow position:
               chr5:2917353-2917782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-414
               

               Cow position:
               chr5:47471269-47471717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 164
               

               Conread position:
               1-414
               

               Cow position:
               chr5:64958886-64958463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               291
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               133, 15
               

               Conread position:
               1-415
               

               Cow position:
               chr5:49521599-49522025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 17
               

               Conread position:
               1-415
               

               Cow position:
               chr5:73444291-73444719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 17
               

               Conread position:
               1-420
               

               Cow position:
               chr5:9235516-9235082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               301
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               141, 17
               

               Conread position:
               1-421
               

               Cow position:
               chr5:2959163-2959592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               283
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               1-421
               

               Cow position:
               chr5:44709493-44709044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 20
               

               Conread position:
               1-421
               

               Cow position:
               chr5:47560672-47560232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-422
               

               Cow position:
               chr5:4349100-4348678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               1-422
               

               Cow position:
               chr5:6585564-6585125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-422
               

               Cow position:
               chr5:18667196-18667636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 18
               

               Conread position:
               1-422
               

               Cow position:
               chr5:42283059-42283492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-422
               

               Cow position:
               chr5:46779405-46779843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-422
               

               Cow position:
               chr5:47342763-47343202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 19
               

               Conread position:
               1-422
               

               Cow position:
               chr5:54136749-54136309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-423
               

               Cow position:
               chr5:2976675-2977115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-423
               

               Cow position:
               chr5:62436015-62436449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-423
               

               Cow position:
               chr5:64779118-64778671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 17
               

               Conread position:
               1-423
               

               Cow position:
               chr5:70348295-70348738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               292
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               17, 80
               

               Conread position:
               1-424
               

               Cow position:
               chr5:295154-295592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:443420-442978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:1059678-1059236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:1339033-1338590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 19
               

               Conread position:
               1-424
               

               Cow position:
               chr5:1382870-1383304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:3501239-3500797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:3544197-3544627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:3789117-3789554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:4015981-4015541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:4434615-4434173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:4963491-4963055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:5106114-5106554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:5682622-5682174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:5925070-5924646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:6125273-6124832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:6151943-6151501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 15
               

               Conread position:
               1-424
               

               Cow position:
               chr5:6455774-6455332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:6772457-6772896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:7396138-7396574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:9003221-9002780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:10066661-10066219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:10840580-10840137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:12921287-12921728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:14543411-14542970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:14636689-14636248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:15761480-15761037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:18119086-18118644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:18558514-18558087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:19979025-19978584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:20108138-20107699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:21189110-21189549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:23829286-23828866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:24101539-24101981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:24298902-24299344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:24577325-24577767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:25912622-25913049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:27196190-27195731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:27907577-27907137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:29256322-29255883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:29634318-29634760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:29742668-29742230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 20
               

               Conread position:
               1-424
               

               Cow position:
               chr5:30582224-30582657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               1-424
               

               Cow position:
               chr5:31709189-31709631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:32755555-32755120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:34683471-34683031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:36370103-36369661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:37625750-37626177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:37735265-37735706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:40791729-40792163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:41066914-41067341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:41488559-41489000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:44617034-44617476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:46666963-46667405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:46676502-46676944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:46735387-46734946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:46817213-46816772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:48805562-48805139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:51166419-51165979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 14
               

               Conread position:
               1-424
               

               Cow position:
               chr5:52823317-52822877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:54952233-54951791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:55630953-55631395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:58191806-58192246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 19
               

               Conread position:
               1-424
               

               Cow position:
               chr5:72299380-72298940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               286
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr5:72856763-72857206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr5:73486010-73485555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               1-425
               

               Cow position:
               chr5:3970414-3970854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-425
               

               Cow position:
               chr5:10921734-10922177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-425
               

               Cow position:
               chr5:42676150-42676573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 17
               

               Conread position:
               1-427
               

               Cow position:
               chr5:710262-709818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 20
               

               Conread position:
               1-427
               

               Cow position:
               chr5:37379976-37380420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-427
               

               Cow position:
               chr5:48026159-48026602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-427
               

               Cow position:
               chr5:51746112-51746552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 246
               

               Conread position:
               1-429
               

               Cow position:
               chr5:46685725-46685300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 20
               

               Conread position:
               1-430
               

               Cow position:
               chr5:6189787-6190210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               289
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               147, 17
               

               Conread position:
               1-430
               

               Cow position:
               chr5:27690883-27691317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 17
               

               Conread position:
               1-430
               

               Cow position:
               chr5:48225689-48225247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr5:4629659-4630101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 18
               

               Conread position:
               1-431
               

               Cow position:
               chr5:8997127-8996676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 18
               

               Conread position:
               1-431
               

               Cow position:
               chr5:10542781-10542338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr5:12133486-12133931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr5:17026967-17027404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr5:18405162-18404720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr5:18901223-18901652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr5:23353630-23354078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr5:31634316-31634770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 18
               

               Conread position:
               1-431
               

               Cow position:
               chr5:32965177-32964721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr5:34299779-34300220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 195
               

               Conread position:
               1-431
               

               Cow position:
               chr5:41391617-41392066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 149
               

               Conread position:
               1-431
               

               Cow position:
               chr5:46626384-46625937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr5:49117462-49117013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr5:49565467-49565902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 14
               

               Conread position:
               1-431
               

               Cow position:
               chr5:52829891-52829449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 110
               

               Conread position:
               1-431
               

               Cow position:
               chr5:54124989-54125408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-431
               

               Cow position:
               chr5:58004126-58004562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 15
               

               Conread position:
               1-431
               

               Cow position:
               chr5:62160035-62159584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 20
               

               Conread position:
               1-431
               

               Cow position:
               chr5:62377263-62377702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               1-432
               

               Cow position:
               chr5:68337608-68337184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               1-433
               

               Cow position:
               chr5:53834543-53834992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 17
               

               Conread position:
               1-434
               

               Cow position:
               chr5:60257-59805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 18
               

               Conread position:
               1-434
               

               Cow position:
               chr5:6031873-6032317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 17
               

               Conread position:
               1-438
               

               Cow position:
               chr5:25920884-25920441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 17
               

               Conread position:
               1-438
               

               Cow position:
               chr5:51501773-51502227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-447
               

               Cow position:
               chr5:23754461-23754003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               1-448
               

               Cow position:
               chr5:54622509-54622968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 17
               

               Conread position:
               1-549
               

               Cow position:
               chr5:34524358-34523784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               586
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 17
               

               Conread position:
               2-261
               

               Cow position:
               chr5:50604459-50604192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               122, 16
               

               Conread position:
               2-321
               

               Cow position:
               chr5:25901584-25901252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 17
               

               Conread position:
               2-344
               

               Cow position:
               chr5:29768949-29769310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 16
               

               Conread position:
               2-409
               

               Cow position:
               chr5:52605733-52605310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               291
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               2-414
               

               Cow position:
               chr5:7141220-7140779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 16
               

               Conread position:
               2-422
               

               Cow position:
               chr5:53075979-53075541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 17
               

               Conread position:
               2-424
               

               Cow position:
               chr5:10772935-10772499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               2-424
               

               Cow position:
               chr5:11632095-11631654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 16
               

               Conread position:
               2-424
               

               Cow position:
               chr5:50202100-50201671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               290
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               127, 16
               

               Conread position:
               2-424
               

               Cow position:
               chr5:54928029-54927590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               2-424
               

               Cow position:
               chr5:54930357-54929918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               2-429
               

               Cow position:
               chr5:54721545-54721984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 16
               

               Conread position:
               2-431
               

               Cow position:
               chr5:18491296-18491750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 16
               

               Conread position:
               2-431
               

               Cow position:
               chr5:24643972-24643533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 16
               

               Conread position:
               2-431
               

               Cow position:
               chr5:26096180-26096609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 16
               

               Conread position:
               2-431
               

               Cow position:
               chr5:41333502-41333925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 6
               

               Conread position:
               2-431
               

               Cow position:
               chr5:41548644-41548214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 16
               

               Conread position:
               2-432
               

               Cow position:
               chr5:34191814-34192258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 17
               

               Conread position:
               2-437
               

               Cow position:
               chr5:29674112-29674548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               89, 17
               

               Conread position:
               3-171
               

               Cow position:
               chr5:57920812-57920976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               3-273
               

               Cow position:
               chr5:31120315-31120033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 15
               

               Conread position:
               3-381
               

               Cow position:
               chr5:71738005-71738400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 15
               

               Conread position:
               3-405
               

               Cow position:
               chr5:34670198-34669779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 409
               

               Conread position:
               3-410
               

               Cow position:
               chr5:63312626-63312208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 15
               

               Conread position:
               3-424
               

               Cow position:
               chr5:49221601-49221168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 16
               

               Conread position:
               3-424
               

               Cow position:
               chr5:58198901-58199340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 17
               

               Conread position:
               3-424
               

               Cow position:
               chr5:59064335-59064774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 16
               

               Conread position:
               3-430
               

               Cow position:
               chr5:13258493-13258916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 15
               

               Conread position:
               4-422
               

               Cow position:
               chr5:47872213-47871780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 5
               

               Conread position:
               4-428
               

               Cow position:
               chr5:48574922-48574496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 14
               

               Conread position:
               4-431
               

               Cow position:
               chr5:14905159-14904742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 14
               

               Conread position:
               4-431
               

               Cow position:
               chr5:27549598-27549176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 14
               

               Conread position:
               4-431
               

               Cow position:
               chr5:41229155-41228708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 14
               

               Conread position:
               5-431
               

               Cow position:
               chr5:29762817-29763245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 185
               

               Conread position:
               6-406
               

               Cow position:
               chr5:40897452-40897043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 13
               

               Conread position:
               6-421
               

               Cow position:
               chr5:4328198-4328611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               278
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               7-165
               

               Cow position:
               chr5:34526292-34526450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               7-171
               

               Cow position:
               chr5:39750126-39749963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               7-223
               

               Cow position:
               chr5:3441217-3441443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               155, 11
               

               Conread position:
               7-229
               

               Cow position:
               chr5:12872319-12872543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               167, 11
               

               Conread position:
               7-406
               

               Cow position:
               chr5:3695257-3695648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               118, 53
               

               Conread position:
               7-422
               

               Cow position:
               chr5:34472042-34471625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               285
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-426
               

               Cow position:
               chr5:37653215-37653639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               277
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               19, 143
               

               Conread position:
               7-426
               

               Cow position:
               chr5:67654223-67654656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 11
               

               Conread position:
               7-431
               

               Cow position:
               chr5:47854728-47855164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 133
               

               Conread position:
               7-435
               

               Cow position:
               chr5:46671506-46671941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 11
               

               Conread position:
               7-438
               

               Cow position:
               chr5:30301751-30302185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 95
               

               Conread position:
               8-261
               

               Cow position:
               chr5:6986589-6986325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 10
               

               Conread position:
               8-386
               

               Cow position:
               chr5:15454673-15455056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 12
               

               Conread position:
               8-406
               

               Cow position:
               chr5:17646187-17645770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 10
               

               Conread position:
               8-406
               

               Cow position:
               chr5:48546232-48546630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               8-431
               

               Cow position:
               chr5:15123384-15122964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               84, 10
               

               Conread position:
               8-431
               

               Cow position:
               chr5:22857738-22857295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 10
               

               Conread position:
               8-431
               

               Cow position:
               chr5:33775872-33775446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 80
               

               Conread position:
               8-431
               

               Cow position:
               chr5:42743704-42744128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 10
               

               Conread position:
               8-431
               

               Cow position:
               chr5:48534750-48535175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 239
               

               Conread position:
               9-170
               

               Cow position:
               chr5:16053408-16053568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               9-408
               

               Cow position:
               chr5:59770944-59771361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               175, 58
               

               Conread position:
               9-417
               

               Cow position:
               chr5:49132105-49132514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               270
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               139, 12
               

               Conread position:
               10-222
               

               Cow position:
               chr5:26076303-26076092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               10-414
               

               Cow position:
               chr5:29223361-29222944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 9
               

               Conread position:
               10-415
               

               Cow position:
               chr5:27006579-27006963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 9
               

               Conread position:
               10-424
               

               Cow position:
               chr5:54786210-54785777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 8
               

               Conread position:
               10-424
               

               Cow position:
               chr5:58770972-58770541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 8
               

               Conread position:
               11-423
               

               Cow position:
               chr5:71457149-71456718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 231
               

               Conread position:
               11-431
               

               Cow position:
               chr5:15723429-15722974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 67
               

               Conread position:
               12-361
               

               Cow position:
               chr5:46650005-46650364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 7
               

               Conread position:
               13-140
               

               Cow position:
               chr5:25232249-25232122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-363
               

               Cow position:
               chr5:24154208-24154566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               149, 52
               

               Conread position:
               13-402
               

               Cow position:
               chr5:26466540-26466932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 88
               

               Conread position:
               13-406
               

               Cow position:
               chr5:69519501-69519914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 94
               

               Conread position:
               14-160
               

               Cow position:
               chr5:51819633-51819778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               16-282
               

               Cow position:
               chr5:39245393-39245115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               16-424
               

               Cow position:
               chr5:4388082-4388512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 337
               

               Conread position:
               17-358
               

               Cow position:
               chr5:14782322-14781969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               256
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               144, 40
               

               Conread position:
               17-414
               

               Cow position:
               chr5:70771070-70771471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               270
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               84, 65
               

               Conread position:
               17-420
               

               Cow position:
               chr5:10853926-10853507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 84
               

               Conread position:
               17-420
               

               Cow position:
               chr5:18249963-18250374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 37
               

               Conread position:
               17-424
               

               Cow position:
               chr5:18883706-18883280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 188
               

               Conread position:
               17-424
               

               Cow position:
               chr5:29661489-29661075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               282
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               17-425
               

               Cow position:
               chr5:19970128-19969714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 212
               

               Conread position:
               17-428
               

               Cow position:
               chr5:55832934-55832505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               48, 191
               

               Conread position:
               17-430
               

               Cow position:
               chr5:32165015-32164600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               283
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               69, 61
               

               Conread position:
               17-431
               

               Cow position:
               chr5:5937210-5937644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 110
               

               Conread position:
               17-431
               

               Cow position:
               chr5:56442163-56442594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 210
               

               Conread position:
               17-431
               

               Cow position:
               chr5:64845361-64844930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               17-434
               

               Cow position:
               chr5:10262379-10261933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 441
               

               Conread position:
               17-436
               

               Cow position:
               chr5:68485317-68485732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               282
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               116, 50
               

               Conread position:
               18-400
               

               Cow position:
               chr5:34285571-34285178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               76, 67
               

               Conread position:
               18-405
               

               Cow position:
               chr5:61330432-61330020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               278
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               115, 77
               

               Conread position:
               19-356
               

               Cow position:
               chr5:59072138-59071789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 304
               

               Conread position:
               20-431
               

               Cow position:
               chr5:27178555-27178973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 195
               

               Conread position:
               20-431
               

               Cow position:
               chr5:28015957-28016394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 26
               

               Conread position:
               21-409
               

               Cow position:
               chr5:70401791-70402184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               151, 56
               

               Conread position:
               21-424
               

               Cow position:
               chr5:26052638-26053062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               21-428
               

               Cow position:
               chr5:19211854-19211438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               278
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               180, 132
               

               Conread position:
               23-421
               

               Cow position:
               chr5:41648345-41648753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               110, 9
               

               Conread position:
               24-402
               

               Cow position:
               chr5:16909968-16909600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               67, 58
               

               Conread position:
               24-424
               

               Cow position:
               chr5:21185423-21185004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               64, 34
               

               Conread position:
               25-428
               

               Cow position:
               chr5:53149355-53148936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               72, 60
               

               Conread position:
               25-431
               

               Cow position:
               chr5:51684710-51684282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 265
               

               Conread position:
               26-259
               

               Cow position:
               chr5:14942903-14942656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               26-423
               

               Cow position:
               chr5:64061241-64061657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 221
               

               Conread position:
               28-292
               

               Cow position:
               chr5:70531547-70531274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 89
               

               Conread position:
               29-378
               

               Cow position:
               chr5:24158851-24159219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               29-442
               

               Cow position:
               chr5:16960506-16960089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               277
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               62, 56
               

               Conread position:
               30-431
               

               Cow position:
               chr5:21187851-21188272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               34-400
               

               Cow position:
               chr5:70846696-70847067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               107, 149
               

               Conread position:
               35-431
               

               Cow position:
               chr5:7552707-7553099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 26
               

               Conread position:
               36-253
               

               Cow position:
               chr5:54454311-54454533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               163, 65
               

               Conread position:
               38-422
               

               Cow position:
               chr5:26073861-26073459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 234
               

               Conread position:
               39-431
               

               Cow position:
               chr5:32811101-32810692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 319
               

               Conread position:
               40-294
               

               Cow position:
               chr5:46588077-46587811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               133, 191
               

               Conread position:
               40-343
               

               Cow position:
               chr5:2704635-2704302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 254
               

               Conread position:
               40-432
               

               Cow position:
               chr5:23648498-23648088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 61
               

               Conread position:
               41-432
               

               Cow position:
               chr5:62384321-62384718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               60, 178
               

               Conread position:
               42-288
               

               Cow position:
               chr5:30051029-30050772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               42-424
               

               Cow position:
               chr5:45179917-45179516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 206
               

               Conread position:
               43-438
               

               Cow position:
               chr5:50899573-50899976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               105, 33
               

               Conread position:
               46-424
               

               Cow position:
               chr5:26100660-26101066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               31, 41
               

               Conread position:
               47-420
               

               Cow position:
               chr5:8178073-8178461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 112
               

               Conread position:
               49-432
               

               Cow position:
               chr5:28947471-28947067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 87
               

               Conread position:
               50-391
               

               Cow position:
               chr5:31133822-31133472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               133, 337
               

               Conread position:
               50-400
               

               Cow position:
               chr5:31560182-31560558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               50-431
               

               Cow position:
               chr5:68593370-68593758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 42
               

               Conread position:
               52-431
               

               Cow position:
               chr5:6576653-6576252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 49
               

               Conread position:
               54-431
               

               Cow position:
               chr5:49070863-49070477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               57-406
               

               Cow position:
               chr5:31916569-31916923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 59
               

               Conread position:
               59-424
               

               Cow position:
               chr5:41548061-41547688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 242
               

               Conread position:
               60-431
               

               Cow position:
               chr5:23845595-23845216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               27, 194
               

               Conread position:
               60-431
               

               Cow position:
               chr5:30294255-30294635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               61-428
               

               Cow position:
               chr5:46707594-46707971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 40
               

               Conread position:
               62-171
               

               Cow position:
               chr5:56287523-56287633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               62-431
               

               Cow position:
               chr5:45704968-45705349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               63-432
               

               Cow position:
               chr5:43991233-43991615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               63-616
               

               Cow position:
               chr5:31921012-31921581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               385
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               99, 188
               

               Conread position:
               66-424
               

               Cow position:
               chr5:34708722-34709100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               68-257
               

               Cow position:
               chr5:10479748-10479544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               69-410
               

               Cow position:
               chr5:40270883-40270528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               69-438
               

               Cow position:
               chr5:72046707-72046326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 341
               

               Conread position:
               71-386
               

               Cow position:
               chr5:17387459-17387126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 331
               

               Conread position:
               71-406
               

               Cow position:
               chr5:54088688-54089025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 95
               

               Conread position:
               71-414
               

               Cow position:
               chr5:54397552-54397207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 170
               

               Conread position:
               71-415
               

               Cow position:
               chr5:58461739-58461371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 216
               

               Conread position:
               73-403
               

               Cow position:
               chr5:24220957-24221303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               100, 338
               

               Conread position:
               75-424
               

               Cow position:
               chr5:54336867-54337233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               78-422
               

               Cow position:
               chr5:12212498-12212862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               78-424
               

               Cow position:
               chr5:4754168-4753802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               78-424
               

               Cow position:
               chr5:15677026-15677390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 186
               

               Conread position:
               78-424
               

               Cow position:
               chr5:57936158-57935787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               7, 339
               

               Conread position:
               78-431
               

               Cow position:
               chr5:38737994-38738354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               263
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               79-431
               

               Cow position:
               chr5:32088805-32088442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 14
               

               Conread position:
               84-424
               

               Cow position:
               chr5:57336393-57336033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               85-394
               

               Cow position:
               chr5:10096866-10096542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 5
               

               Conread position:
               86-416
               

               Cow position:
               chr5:75755558-75755895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 165
               

               Conread position:
               86-420
               

               Cow position:
               chr5:76099057-76098703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               87-431
               

               Cow position:
               chr5:21524019-21524386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 280
               

               Conread position:
               87-438
               

               Cow position:
               chr5:18703451-18703086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 275
               

               Conread position:
               90-420
               

               Cow position:
               chr5:46796912-46797227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 42
               

               Conread position:
               93-310
               

               Cow position:
               chr5:58145727-58145503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               72, 103
               

               Conread position:
               93-424
               

               Cow position:
               chr5:445459-445810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               93-424
               

               Cow position:
               chr5:12337254-12337604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               93-431
               

               Cow position:
               chr5:40929038-40928688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 8
               

               Conread position:
               94-431
               

               Cow position:
               chr5:5716094-5715751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               95-392
               

               Cow position:
               chr5:21557604-21557292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               58, 179
               

               Conread position:
               96-306
               

               Cow position:
               chr5:46000189-45999969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 165
               

               Conread position:
               96-409
               

               Cow position:
               chr5:28026406-28026707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 42
               

               Conread position:
               98-424
               

               Cow position:
               chr5:55722514-55722860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               100-424
               

               Cow position:
               chr5:41586261-41586605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               101-378
               

               Cow position:
               chr5:33536605-33536895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               72, 99
               

               Conread position:
               101-420
               

               Cow position:
               chr5:24088064-24087723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               103-392
               

               Cow position:
               chr5:16100553-16100263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               98, 68
               

               Conread position:
               103-424
               

               Cow position:
               chr5:4683509-4683170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 13
               

               Conread position:
               105-409
               

               Cow position:
               chr5:18126617-18126931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               57, 145
               

               Conread position:
               105-420
               

               Cow position:
               chr5:1395466-1395135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 46
               

               Conread position:
               105-431
               

               Cow position:
               chr5:14551609-14551263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               110-424
               

               Cow position:
               chr5:6694531-6694865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 304
               

               Conread position:
               111-422
               

               Cow position:
               chr5:26595851-26596186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               112-409
               

               Cow position:
               chr5:35207241-35207557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               112-424
               

               Cow position:
               chr5:13807752-13807430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 157
               

               Conread position:
               112-424
               

               Cow position:
               chr5:58245331-58245663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 172
               

               Conread position:
               113-422
               

               Cow position:
               chr5:28223440-28223770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 162
               

               Conread position:
               115-431
               

               Cow position:
               chr5:4165633-4165963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 296
               

               Conread position:
               115-431
               

               Cow position:
               chr5:25927436-25927091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 256
               

               Conread position:
               118-431
               

               Cow position:
               chr5:41980421-41980723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               55, 115
               

               Conread position:
               119-422
               

               Cow position:
               chr5:44275607-44275924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 205
               

               Conread position:
               119-431
               

               Cow position:
               chr5:16085803-16085472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               153-424
               

               Cow position:
               chr5:59146660-59146939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               158-288
               

               Cow position:
               chr5:12325370-12325501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               161-378
               

               Cow position:
               chr5:6044061-6044282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               161-431
               

               Cow position:
               chr5:15362103-15362375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               13, 202
               

               Conread position:
               164-260
               

               Cow position:
               chr5:40891689-40891593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               164-386
               

               Cow position:
               chr5:8529715-8529937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               164-391
               

               Cow position:
               chr5:60446497-60446729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               164-405
               

               Cow position:
               chr5:40357880-40357649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               37, 166
               

               Conread position:
               164-418
               

               Cow position:
               chr5:35180193-35180453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               164-421
               

               Cow position:
               chr5:7175362-7175626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               164-421
               

               Cow position:
               chr5:55087917-55088180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               33, 252
               

               Conread position:
               164-431
               

               Cow position:
               chr5:1105808-1105539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               32, 92
               

               Conread position:
               164-431
               

               Cow position:
               chr5:29558661-29558927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 47
               

               Conread position:
               164-431
               

               Cow position:
               chr5:45941927-45941658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 52
               

               Conread position:
               165-393
               

               Cow position:
               chr5:6180601-6180838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               36, 167
               

               Conread position:
               165-402
               

               Cow position:
               chr5:34559212-34559453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               165-424
               

               Cow position:
               chr5:28012922-28013188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               165-424
               

               Cow position:
               chr5:39362937-39363203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               165-428
               

               Cow position:
               chr5:16895083-16894817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               9, 87
               

               Conread position:
               165-431
               

               Cow position:
               chr5:6671104-6670842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 183
               

               Conread position:
               167-404
               

               Cow position:
               chr5:34527640-34527877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 76
               

               Conread position:
               168-424
               

               Cow position:
               chr5:75755051-75754793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               172-408
               

               Cow position:
               chr5:27903477-27903710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               172-409
               

               Cow position:
               chr5:1344823-1344575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               172-424
               

               Cow position:
               chr5:59782690-59782435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 218
               

               Conread position:
               172-431
               

               Cow position:
               chr5:41603353-41603617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 182
               

               Conread position:
               172-431
               

               Cow position:
               chr5:41951986-41951726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               173-413
               

               Cow position:
               chr5:47081268-47081513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               89, 59
               

               Conread position:
               174-422
               

               Cow position:
               chr5:58353292-58353534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 59
               

               Conread position:
               174-424
               

               Cow position:
               chr5:7498911-7498654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               174-424
               

               Cow position:
               chr5:43437868-43437611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               174-425
               

               Cow position:
               chr5:280105-279848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 65
               

               Conread position:
               174-431
               

               Cow position:
               chr5:12558507-12558239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               175-344
               

               Cow position:
               chr5:39174168-39173993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               176-431
               

               Cow position:
               chr5:50923768-50923508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 181
               

               Conread position:
               177-417
               

               Cow position:
               chr5:41523914-41523672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               179-383
               

               Cow position:
               chr5:48056136-48056338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               179-424
               

               Cow position:
               chr5:2395229-2394977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               180-402
               

               Cow position:
               chr5:18275555-18275765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               182-424
               

               Cow position:
               chr5:7042324-7042572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               192-428
               

               Cow position:
               chr5:3551609-3551377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               83, 10
               

               Conread position:
               192-429
               

               Cow position:
               chr5:15856131-15855896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               102, 10
               

               Conread position:
               195-428
               

               Cow position:
               chr5:49126802-49127042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 32
               

               Conread position:
               200-429
               

               Cow position:
               chr5:72007792-72007554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               200-430
               

               Cow position:
               chr5:51070283-51070521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               204-345
               

               Cow position:
               chr5:69098261-69098408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               204-402
               

               Cow position:
               chr5:37384430-37384227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               205-424
               

               Cow position:
               chr5:42043955-42044176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               156, 207
               

               Conread position:
               205-431
               

               Cow position:
               chr5:52041378-52041151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 184
               

               Conread position:
               206-431
               

               Cow position:
               chr5:50599166-50599395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 121
               

               Conread position:
               207-431
               

               Cow position:
               chr5:10254675-10254897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               115, 157
               

               Conread position:
               208-424
               

               Cow position:
               chr5:6060522-6060301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 210
               

               Conread position:
               208-424
               

               Cow position:
               chr5:6219053-6219277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 108
               

               Conread position:
               208-424
               

               Cow position:
               chr5:29968717-29968939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               208-424
               

               Cow position:
               chr5:43984193-43984415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               208-424
               

               Cow position:
               chr5:58900935-58900713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               208-424
               

               Cow position:
               chr5:67813971-67814193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               208-431
               

               Cow position:
               chr5:14558349-14558119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               208-431
               

               Cow position:
               chr5:17426041-17425811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 120
               

               Conread position:
               208-431
               

               Cow position:
               chr5:59268526-59268748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 82
               

               Conread position:
               210-414
               

               Cow position:
               chr5:39749331-39749123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 206
               

               Conread position:
               210-421
               

               Cow position:
               chr5:53185390-53185175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 12
               

               Conread position:
               212-420
               

               Cow position:
               chr5:27063127-27062912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               213-411
               

               Cow position:
               chr5:11437523-11437326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 20
               

               Conread position:
               214-386
               

               Cow position:
               chr5:38379108-38379284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               215-424
               

               Cow position:
               chr5:7276992-7277201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               49, 33
               

               Conread position:
               215-431
               

               Cow position:
               chr5:14630814-14630598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               79, 163
               

               Conread position:
               215-431
               

               Cow position:
               chr5:58145526-58145312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               217-431
               

               Cow position:
               chr5:39936217-39936436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               218-425
               

               Cow position:
               chr5:39448427-39448218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 195
               

               Conread position:
               218-431
               

               Cow position:
               chr5:39816181-39815970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               79, 37
               

               Conread position:
               218-431
               

               Cow position:
               chr5:40828260-40828041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 115
               

               Conread position:
               218-438
               

               Cow position:
               chr5:1780459-1780237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               222-417
               

               Cow position:
               chr5:6840059-6839869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               74, 52
               

               Conread position:
               222-422
               

               Cow position:
               chr5:12872570-12872772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               71, 11
               

               Conread position:
               222-422
               

               Cow position:
               chr5:22774765-22774968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 180
               

               Conread position:
               222-424
               

               Cow position:
               chr5:55985771-55985978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               72, 106
               

               Conread position:
               222-424
               

               Cow position:
               chr5:57986626-57986826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               177, 28
               

               Conread position:
               222-431
               

               Cow position:
               chr5:16207034-16206821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               222-431
               

               Cow position:
               chr5:50728433-50728641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               66, 52
               

               Conread position:
               223-421
               

               Cow position:
               chr5:70103557-70103349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               223-424
               

               Cow position:
               chr5:3203962-3204161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               177, 23
               

               Conread position:
               223-431
               

               Cow position:
               chr5:66337975-66338183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               74, 175
               

               Conread position:
               224-430
               

               Cow position:
               chr5:4199497-4199288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 163
               

               Conread position:
               224-431
               

               Cow position:
               chr5:9676504-9676292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               70, 189
               

               Conread position:
               224-433
               

               Cow position:
               chr5:50063670-50063878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               179, 50
               

               Conread position:
               224-438
               

               Cow position:
               chr5:66256757-66256976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               70, 51
               

               Conread position:
               226-422
               

               Cow position:
               chr5:5787203-5787001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               228-441
               

               Cow position:
               chr5:21785222-21784999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 202
               

               Conread position:
               232-400
               

               Cow position:
               chr5:6901636-6901464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 128
               

               Conread position:
               232-429
               

               Cow position:
               chr5:15477838-15478044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               233-400
               

               Cow position:
               chr5:57927014-57926841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               57, 151
               

               Conread position:
               233-402
               

               Cow position:
               chr5:31503279-31503453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               233-431
               

               Cow position:
               chr5:3441473-3441679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 127
               

               Conread position:
               234-428
               

               Cow position:
               chr5:28529186-28528990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 149
               

               Conread position:
               237-424
               

               Cow position:
               chr5:411581-411388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               237-453
               

               Cow position:
               chr5:54454634-54454855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               238-431
               

               Cow position:
               chr5:14313409-14313604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               64, 174
               

               Conread position:
               239-431
               

               Cow position:
               chr5:36724584-36724390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               162
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               240-406
               

               Cow position:
               chr5:41608377-41608547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               244-424
               

               Cow position:
               chr5:68273704-68273518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               245-424
               

               Cow position:
               chr5:39216401-39216586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               246-402
               

               Cow position:
               chr5:48971876-48972037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               246-422
               

               Cow position:
               chr5:25496262-25496082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               56, 163
               

               Conread position:
               246-431
               

               Cow position:
               chr5:47600915-47601101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               55, 111
               

               Conread position:
               246-431
               

               Cow position:
               chr5:51309099-51309281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               49, 134
               

               Conread position:
               249-424
               

               Cow position:
               chr5:38662874-38663056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               251-427
               

               Cow position:
               chr5:31217244-31217422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               34, 157
               

               Conread position:
               253-431
               

               Cow position:
               chr5:34637595-34637781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               254-431
               

               Cow position:
               chr5:36406311-36406496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               255-431
               

               Cow position:
               chr5:52646184-52646005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               39, 147
               

               Conread position:
               255-431
               

               Cow position:
               chr5:54868372-54868554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               256-391
               

               Cow position:
               chr5:26626421-26626557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               257-424
               

               Cow position:
               chr5:54360963-54360790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               258-409
               

               Cow position:
               chr5:26335976-26335827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               259-424
               

               Cow position:
               chr5:27058478-27058308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               35, 9
               

               Conread position:
               260-424
               

               Cow position:
               chr5:43349955-43350125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               262-406
               

               Cow position:
               chr5:32081385-32081236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               262-422
               

               Cow position:
               chr5:10479483-10479316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               262-431
               

               Cow position:
               chr5:47704993-47704821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               6, 17
               

               Conread position:
               263-431
               

               Cow position:
               chr5:7192592-7192760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               136, 23
               

               Conread position:
               265-424
               

               Cow position:
               chr5:34886501-34886346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               103, 131
               

               Conread position:
               268-424
               

               Cow position:
               chr5:19780866-19780705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               26, 79
               

               Conread position:
               269-424
               

               Cow position:
               chr5:49102994-49103155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               270-431
               

               Cow position:
               chr5:13867436-13867272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               272-422
               

               Cow position:
               chr5:742287-742131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               273-431
               

               Cow position:
               chr5:65593070-65593232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               17, 61
               

               Conread position:
               275-431
               

               Cow position:
               chr5:19471082-19470918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               278-430
               

               Cow position:
               chr5:31145611-31145461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 125
               

               Conread position:
               279-428
               

               Cow position:
               chr5:1767145-1767000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               281-431
               

               Cow position:
               chr5:45999868-45999721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 70
               

               Conread position:
               287-394
               

               Cow position:
               chr5:46339153-46339260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-431
               

               Cow position:
               chr5:72345643-72345504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               298-424
               

               Cow position:
               chr5:12325385-12325258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               298-424
               

               Cow position:
               chr5:31285061-31285188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               298-424
               

               Cow position:
               chr5:49429129-49429002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               298-431
               

               Cow position:
               chr5:31119985-31119852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               299-431
               

               Cow position:
               chr5:66113230-66113102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               302-424
               

               Cow position:
               chr5:54714558-54714435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               305-424
               

               Cow position:
               chr5:14140853-14140971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 41
               

               Conread position:
               311-430
               

               Cow position:
               chr5:34584968-34584848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               313-431
               

               Cow position:
               chr5:6129647-6129763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               322-431
               

               Cow position:
               chr5:693785-693891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               47, 76
               
Show alignments to all cow chromosomes.
Conread position:	1-118
Cow position:	chr5:32954216-32954332 (view UCSC Genome Browser custom track)
Alignm length:	118
Alignm identity:	97
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	17, 0
Conread position:	1-138
Cow position:	chr5:6840332-6840196 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	117
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	17, 0
Conread position:	1-139
Cow position:	chr5:6536649-6536513 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	113
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	18, 0
Conread position:	1-144
Cow position:	chr5:44482493-44482635 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	122
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	17, 0
Conread position:	1-148
Cow position:	chr5:60446046-60445901 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	121
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	18, 0
Conread position:	1-151
Cow position:	chr5:15316619-15316766 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	110
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	17, 0
Conread position:	1-160
Cow position:	chr5:30844718-30844873 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	127
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	17, 0
Conread position:	1-168
Cow position:	chr5:30360563-30360399 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	119
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	5, 0
Conread position:	1-170
Cow position:	chr5:2699284-2699116 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	138
Alignm E-value:	4.00001e-40
Alignm gaps (pig, cow):	18, 0
Conread position:	1-171
Cow position:	chr5:6615404-6615235 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	137
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	18, 0
Conread position:	1-181
Cow position:	chr5:57336524-57336340 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	143
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	135, 18
Conread position:	1-236
Cow position:	chr5:50675698-50675450 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	185
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	172, 18
Conread position:	1-241
Cow position:	chr5:39935975-39936207 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	186
Alignm E-value:	5.00264e-43
Alignm gaps (pig, cow):	171, 17
Conread position:	1-255
Cow position:	chr5:54867920-54868179 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	204
Alignm E-value:	5.00264e-43
Alignm gaps (pig, cow):	172, 14
Conread position:	1-257
Cow position:	chr5:39216348-39216078 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	205
Alignm E-value:	0
Alignm gaps (pig, cow):	165, 18
Conread position:	1-264
Cow position:	chr5:38662221-38662497 (view UCSC Genome Browser custom track)
Alignm length:	278
Alignm identity:	213
Alignm E-value:	0
Alignm gaps (pig, cow):	170, 18
Conread position:	1-265
Cow position:	chr5:26624927-26624664 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	198
Alignm E-value:	2.00386e-43
Alignm gaps (pig, cow):	69, 18
Conread position:	1-274
Cow position:	chr5:11358015-11358301 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	219
Alignm E-value:	0
Alignm gaps (pig, cow):	172, 18
Conread position:	1-278
Cow position:	chr5:30157249-30157539 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	225
Alignm E-value:	0
Alignm gaps (pig, cow):	172, 18
Conread position:	1-279
Cow position:	chr5:23642323-23642038 (view UCSC Genome Browser custom track)
Alignm length:	289
Alignm identity:	217
Alignm E-value:	0
Alignm gaps (pig, cow):	168, 17