Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rpigcf0_011841.5.5
        

               Conread position:
               1-106
               

               Cow position:
               chr6:25217981-25218085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-113
               

               Cow position:
               chr6:45591576-45591687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-116
               

               Cow position:
               chr6:13490973-13490859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-126
               

               Cow position:
               chr6:27761730-27761854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-131
               

               Cow position:
               chr6:59710758-59710887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr6:1888410-1888273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr6:1818771-1818634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-144
               

               Cow position:
               chr6:52696664-52696801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr6:62577154-62577010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr6:17927451-17927598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr6:11829608-11829451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               1-165
               

               Cow position:
               chr6:39897978-39898141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr6:45279965-45280130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               130, 17
               

               Conread position:
               1-167
               

               Cow position:
               chr6:50721126-50721289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr6:48544-48376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               139
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr6:13850766-13850934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               141
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr6:8536267-8536098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               1-171
               

               Cow position:
               chr6:18520054-18519885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               140
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr6:18571550-18571387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr6:34017981-34017812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr6:34129485-34129654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr6:38932226-38932057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr6:41414319-41414148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               1-171
               

               Cow position:
               chr6:49826224-49826055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               139
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr6:14840854-14841029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               1-181
               

               Cow position:
               chr6:28476099-28476275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               1-186
               

               Cow position:
               chr6:49165574-49165390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-214
               

               Cow position:
               chr6:2581426-2581655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               1-240
               

               Cow position:
               chr6:21975980-21976219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               187, 17
               

               Conread position:
               1-240
               

               Cow position:
               chr6:35883600-35883843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               1-245
               

               Cow position:
               chr6:16699234-16699476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 17
               

               Conread position:
               1-246
               

               Cow position:
               chr6:65930275-65930544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               1-249
               

               Cow position:
               chr6:38873633-38873372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               172, 19
               

               Conread position:
               1-249
               

               Cow position:
               chr6:57181848-57182103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-252
               

               Cow position:
               chr6:55042095-55041837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 17
               

               Conread position:
               1-256
               

               Cow position:
               chr6:28488550-28488282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               1-257
               

               Cow position:
               chr6:42616126-42616392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 17
               

               Conread position:
               1-264
               

               Cow position:
               chr6:20351061-20350785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-265
               

               Cow position:
               chr6:43049167-43048890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-266
               

               Cow position:
               chr6:41408433-41408710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 7
               

               Conread position:
               1-274
               

               Cow position:
               chr6:45724117-45723834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 18
               

               Conread position:
               1-288
               

               Cow position:
               chr6:66188772-66188472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 18
               

               Conread position:
               1-294
               

               Cow position:
               chr6:1507482-1507176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-294
               

               Cow position:
               chr6:33490026-33489720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-299
               

               Cow position:
               chr6:1105122-1104826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 17
               

               Conread position:
               1-300
               

               Cow position:
               chr6:58016384-58016689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 17
               

               Conread position:
               1-306
               

               Cow position:
               chr6:52899978-52900292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               233
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               138, 17
               

               Conread position:
               1-316
               

               Cow position:
               chr6:12628930-12629252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 18
               

               Conread position:
               1-321
               

               Cow position:
               chr6:27151413-27151075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 18
               

               Conread position:
               1-325
               

               Cow position:
               chr6:68030207-68030549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-327
               

               Cow position:
               chr6:43039039-43038699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 21
               

               Conread position:
               1-329
               

               Cow position:
               chr6:11168533-11168879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 333
               

               Conread position:
               1-335
               

               Cow position:
               chr6:10570868-10570509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               1-338
               

               Cow position:
               chr6:50485745-50485401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-345
               

               Cow position:
               chr6:51868023-51868377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-346
               

               Cow position:
               chr6:30269875-30269511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-348
               

               Cow position:
               chr6:11354147-11353780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 17
               

               Conread position:
               1-357
               

               Cow position:
               chr6:58605556-58605929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 17
               

               Conread position:
               1-365
               

               Cow position:
               chr6:41192354-41192735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-369
               

               Cow position:
               chr6:49761491-49761877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 17
               

               Conread position:
               1-370
               

               Cow position:
               chr6:66238228-66238593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               161, 7
               

               Conread position:
               1-375
               

               Cow position:
               chr6:53935604-53935218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 17
               

               Conread position:
               1-375
               

               Cow position:
               chr6:62001312-62000924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               189, 7
               

               Conread position:
               1-377
               

               Cow position:
               chr6:36230498-36230104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-383
               

               Cow position:
               chr6:33508292-33508674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-385
               

               Cow position:
               chr6:45736815-45736438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 20
               

               Conread position:
               1-386
               

               Cow position:
               chr6:15924562-15924164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 7
               

               Conread position:
               1-389
               

               Cow position:
               chr6:529862-529459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               1-389
               

               Cow position:
               chr6:43620759-43621165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-392
               

               Cow position:
               chr6:61829257-61829666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-393
               

               Cow position:
               chr6:52978131-52977729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               1-393
               

               Cow position:
               chr6:67173583-67173993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-394
               

               Cow position:
               chr6:17556644-17556234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               1-396
               

               Cow position:
               chr6:30316916-30316504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               1-402
               

               Cow position:
               chr6:15181194-15181604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               277
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               102, 17
               

               Conread position:
               1-405
               

               Cow position:
               chr6:6720999-6721421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               294
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               132, 5
               

               Conread position:
               1-405
               

               Cow position:
               chr6:27526935-27526515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-405
               

               Cow position:
               chr6:67448898-67448476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-406
               

               Cow position:
               chr6:16703715-16703294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 22
               

               Conread position:
               1-406
               

               Cow position:
               chr6:19441234-19441656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               297
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               81, 18
               

               Conread position:
               1-409
               

               Cow position:
               chr6:224480-224054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 128
               

               Conread position:
               1-409
               

               Cow position:
               chr6:10650764-10650342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-409
               

               Cow position:
               chr6:14950625-14950201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 309
               

               Conread position:
               1-409
               

               Cow position:
               chr6:16624804-16625235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               1-409
               

               Cow position:
               chr6:32419977-32420400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 18
               

               Conread position:
               1-409
               

               Cow position:
               chr6:40760058-40760500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               309
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               89, 17
               

               Conread position:
               1-409
               

               Cow position:
               chr6:50113712-50114127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-413
               

               Cow position:
               chr6:34843685-34843257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-417
               

               Cow position:
               chr6:6556989-6557424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-417
               

               Cow position:
               chr6:9840101-9839674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               1-417
               

               Cow position:
               chr6:40550671-40550237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 14
               

               Conread position:
               1-417
               

               Cow position:
               chr6:53672366-53672796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               1-419
               

               Cow position:
               chr6:59619102-59619537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               1-420
               

               Cow position:
               chr6:44017800-44017362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 20
               

               Conread position:
               1-421
               

               Cow position:
               chr6:3886476-3886038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-421
               

               Cow position:
               chr6:14928487-14928918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-421
               

               Cow position:
               chr6:36531301-36531741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 17
               

               Conread position:
               1-421
               

               Cow position:
               chr6:47149941-47149504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 17
               

               Conread position:
               1-422
               

               Cow position:
               chr6:452235-451795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-422
               

               Cow position:
               chr6:1796655-1797093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-422
               

               Cow position:
               chr6:9234540-9234979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-422
               

               Cow position:
               chr6:11869906-11869468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 21
               

               Conread position:
               1-422
               

               Cow position:
               chr6:12351860-12352306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 17
               

               Conread position:
               1-422
               

               Cow position:
               chr6:12997449-12997887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-422
               

               Cow position:
               chr6:28481365-28481793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 14
               

               Conread position:
               1-423
               

               Cow position:
               chr6:27172858-27173310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               1-423
               

               Cow position:
               chr6:50571219-50571660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:127104-126665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:182512-182083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 7
               

               Conread position:
               1-424
               

               Cow position:
               chr6:328332-327893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 15
               

               Conread position:
               1-424
               

               Cow position:
               chr6:706026-706468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:843800-843357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:888585-889027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:917071-917524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:1536733-1537175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:2089311-2089739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:2186754-2186312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:2876003-2875564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:3152246-3152685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:3272453-3272013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:3485391-3484949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:5946747-5946305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:6034769-6034331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:6569190-6568764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:7138312-7137872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:7467622-7467181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:8205216-8205657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:10044243-10044676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:11019685-11020128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:11453840-11453397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:12926601-12927038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:13308368-13307928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:14290467-14290044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               289
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               141, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:15138145-15137703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:15276212-15275770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:16592989-16593418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:17112137-17111696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:17121414-17121859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:17386551-17386993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:19713206-19712775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:20450988-20451429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:21711734-21712176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:21857337-21856905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:22737679-22737236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:23568565-23568123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:23880028-23879589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:25790671-25790247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:26325171-26324730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:26667996-26667555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:26772093-26771652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:27475440-27475886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:28160437-28160879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:28185302-28184851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:31913147-31912705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:31940895-31941337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:33809406-33808964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:37387606-37388036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:39331503-39331063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:39912353-39912792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:39999429-39998989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:40278087-40278521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:40813393-40813831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:40864004-40863562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-424
               

               Cow position:
               chr6:40975214-40975634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:41231516-41231953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:43087564-43087133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               1-424
               

               Cow position:
               chr6:44146919-44146479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:45480060-45479618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:45937326-45937749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:46947847-46948285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:47171110-47171532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 21
               

               Conread position:
               1-424
               

               Cow position:
               chr6:51149970-51150412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:51717583-51718027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:51733110-51733551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 19
               

               Conread position:
               1-424
               

               Cow position:
               chr6:55238724-55239160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:57521203-57521645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:58030807-58031246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:60332371-60332815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:60379191-60379633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:62664803-62665245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 18
               

               Conread position:
               1-424
               

               Cow position:
               chr6:64719346-64719785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-424
               

               Cow position:
               chr6:65819552-65819112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 19
               

               Conread position:
               1-424
               

               Cow position:
               chr6:67553260-67553702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-425
               

               Cow position:
               chr6:6182680-6182255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 19
               

               Conread position:
               1-425
               

               Cow position:
               chr6:34493703-34494143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-425
               

               Cow position:
               chr6:34504493-34504053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 17
               

               Conread position:
               1-426
               

               Cow position:
               chr6:44950432-44949983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               296
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               60, 17
               

               Conread position:
               1-427
               

               Cow position:
               chr6:12663287-12662849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-428
               

               Cow position:
               chr6:39957104-39957545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               118, 18
               

               Conread position:
               1-430
               

               Cow position:
               chr6:52245537-52245977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr6:4388768-4389189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr6:10236224-10236665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr6:10267063-10266651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 19
               

               Conread position:
               1-431
               

               Cow position:
               chr6:10611855-10612302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr6:21832632-21832183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr6:28102837-28102396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 7
               

               Conread position:
               1-431
               

               Cow position:
               chr6:33465987-33466434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr6:34074896-34075346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr6:38438634-38439088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr6:43187133-43187586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr6:46633147-46633588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-431
               

               Cow position:
               chr6:47380694-47381161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 17
               

               Conread position:
               1-432
               

               Cow position:
               chr6:2087549-2087995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               299
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               183, 343
               

               Conread position:
               1-432
               

               Cow position:
               chr6:65875252-65874810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 20
               

               Conread position:
               1-438
               

               Cow position:
               chr6:727592-727148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 17
               

               Conread position:
               1-438
               

               Cow position:
               chr6:6119959-6119510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 17
               

               Conread position:
               1-438
               

               Cow position:
               chr6:56452067-56451614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               1-447
               

               Cow position:
               chr6:16596013-16596459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               298
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               1-453
               

               Cow position:
               chr6:6163166-6163613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               302
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               172, 17
               

               Conread position:
               1-453
               

               Cow position:
               chr6:33983844-33984303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               2-162
               

               Cow position:
               chr6:44510091-44510248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               2-171
               

               Cow position:
               chr6:14305653-14305821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               2-171
               

               Cow position:
               chr6:17595256-17595088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               142
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               2-171
               

               Cow position:
               chr6:58952092-58951927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               2-264
               

               Cow position:
               chr6:67211559-67211290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               170, 207
               

               Conread position:
               2-267
               

               Cow position:
               chr6:65892840-65892566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 16
               

               Conread position:
               2-318
               

               Cow position:
               chr6:25357832-25357504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 16
               

               Conread position:
               2-364
               

               Cow position:
               chr6:30492221-30491849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               86, 16
               

               Conread position:
               2-384
               

               Cow position:
               chr6:618445-618841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 16
               

               Conread position:
               2-402
               

               Cow position:
               chr6:18987172-18987575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 16
               

               Conread position:
               2-402
               

               Cow position:
               chr6:50637315-50637715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 16
               

               Conread position:
               2-403
               

               Cow position:
               chr6:16418653-16418235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 17
               

               Conread position:
               2-409
               

               Cow position:
               chr6:14851717-14851286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 16
               

               Conread position:
               2-414
               

               Cow position:
               chr6:62326302-62326728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 229
               

               Conread position:
               2-417
               

               Cow position:
               chr6:28171940-28172367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 16
               

               Conread position:
               2-420
               

               Cow position:
               chr6:60876331-60876762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 16
               

               Conread position:
               2-421
               

               Cow position:
               chr6:22043979-22043542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               2-423
               

               Cow position:
               chr6:14144061-14144490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 16
               

               Conread position:
               2-424
               

               Cow position:
               chr6:478579-479016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               2-424
               

               Cow position:
               chr6:28065020-28065460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 17
               

               Conread position:
               2-424
               

               Cow position:
               chr6:33950131-33949693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 16
               

               Conread position:
               2-424
               

               Cow position:
               chr6:55539242-55538801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 16
               

               Conread position:
               2-425
               

               Cow position:
               chr6:7161805-7162224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               274
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               126, 21
               

               Conread position:
               2-426
               

               Cow position:
               chr6:6595452-6595889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 17
               

               Conread position:
               2-431
               

               Cow position:
               chr6:4903957-4903524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 16
               

               Conread position:
               2-431
               

               Cow position:
               chr6:10694742-10695198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               2-431
               

               Cow position:
               chr6:55593084-55593547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               2-431
               

               Cow position:
               chr6:57856798-57857247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 16
               

               Conread position:
               2-438
               

               Cow position:
               chr6:2367232-2366785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 16
               

               Conread position:
               2-439
               

               Cow position:
               chr6:8634275-8633838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 16
               

               Conread position:
               3-411
               

               Cow position:
               chr6:64425822-64426236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 15
               

               Conread position:
               3-414
               

               Cow position:
               chr6:9738223-9737800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 15
               

               Conread position:
               3-414
               

               Cow position:
               chr6:16766810-16766383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 16
               

               Conread position:
               3-424
               

               Cow position:
               chr6:47040179-47039741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 18
               

               Conread position:
               3-424
               

               Cow position:
               chr6:63177073-63177513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 16
               

               Conread position:
               3-431
               

               Cow position:
               chr6:3928177-3928611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 16
               

               Conread position:
               3-453
               

               Cow position:
               chr6:3893612-3893141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 15
               

               Conread position:
               4-278
               

               Cow position:
               chr6:2452878-2453164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 15
               

               Conread position:
               5-414
               

               Cow position:
               chr6:32286586-32287009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 13
               

               Conread position:
               6-168
               

               Cow position:
               chr6:47025068-47025231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               6-407
               

               Cow position:
               chr6:15480605-15481012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               6-420
               

               Cow position:
               chr6:43797875-43797435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 407
               

               Conread position:
               6-422
               

               Cow position:
               chr6:25375075-25374640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 13
               

               Conread position:
               6-424
               

               Cow position:
               chr6:1834027-1834465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               6-424
               

               Cow position:
               chr6:28001357-28000926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 13
               

               Conread position:
               6-431
               

               Cow position:
               chr6:11639169-11638729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 252
               

               Conread position:
               7-167
               

               Cow position:
               chr6:23000226-23000391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 133
               

               Conread position:
               7-171
               

               Cow position:
               chr6:49625867-49626027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               7-256
               

               Cow position:
               chr6:365918-366186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-391
               

               Cow position:
               chr6:65049628-65049248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 11
               

               Conread position:
               7-414
               

               Cow position:
               chr6:9733936-9733533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 11
               

               Conread position:
               7-421
               

               Cow position:
               chr6:19103874-19103441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 12
               

               Conread position:
               7-421
               

               Cow position:
               chr6:37386182-37386613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               99, 75
               

               Conread position:
               7-424
               

               Cow position:
               chr6:53543449-53543013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 12
               

               Conread position:
               7-428
               

               Cow position:
               chr6:49732831-49733260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               291
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               39, 14
               

               Conread position:
               7-431
               

               Cow position:
               chr6:24584345-24583925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 11
               

               Conread position:
               7-431
               

               Cow position:
               chr6:42266773-42267194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               7-431
               

               Cow position:
               chr6:50120892-50120450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               7-431
               

               Cow position:
               chr6:59507272-59507683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               297
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               8-170
               

               Cow position:
               chr6:27534768-27534607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               8-266
               

               Cow position:
               chr6:18970402-18970136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               10, 235
               

               Conread position:
               8-409
               

               Cow position:
               chr6:24632214-24631797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 10
               

               Conread position:
               8-414
               

               Cow position:
               chr6:34237056-34236636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 59
               

               Conread position:
               8-414
               

               Cow position:
               chr6:44494243-44494658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               283
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               25, 120
               

               Conread position:
               8-414
               

               Cow position:
               chr6:55474339-55474767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               8-421
               

               Cow position:
               chr6:1498233-1498668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 108
               

               Conread position:
               8-424
               

               Cow position:
               chr6:15783942-15783524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 15
               

               Conread position:
               8-424
               

               Cow position:
               chr6:16050257-16049823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 11
               

               Conread position:
               8-424
               

               Cow position:
               chr6:58880247-58880665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               274
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               145, 34
               

               Conread position:
               8-429
               

               Cow position:
               chr6:47154448-47154868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               180, 11
               

               Conread position:
               8-430
               

               Cow position:
               chr6:63405846-63406265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               133, 10
               

               Conread position:
               8-431
               

               Cow position:
               chr6:6459148-6459586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 242
               

               Conread position:
               8-431
               

               Cow position:
               chr6:28550030-28549561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 456
               

               Conread position:
               8-431
               

               Cow position:
               chr6:35600712-35601154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 246
               

               Conread position:
               8-431
               

               Cow position:
               chr6:65848334-65847900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               8-481
               

               Cow position:
               chr6:40158482-40158020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               315
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               9-374
               

               Cow position:
               chr6:47614797-47614424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 9
               

               Conread position:
               9-424
               

               Cow position:
               chr6:21163338-21163773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               9-425
               

               Cow position:
               chr6:46764366-46763935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 11
               

               Conread position:
               9-430
               

               Cow position:
               chr6:5130417-5130000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               9-430
               

               Cow position:
               chr6:47848872-47848451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 57
               

               Conread position:
               9-438
               

               Cow position:
               chr6:29085339-29084898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 11
               

               Conread position:
               10-170
               

               Cow position:
               chr6:1380237-1380076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 8
               

               Conread position:
               10-318
               

               Cow position:
               chr6:43330383-43330060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               178, 161
               

               Conread position:
               10-351
               

               Cow position:
               chr6:6165678-6166016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 46
               

               Conread position:
               10-405
               

               Cow position:
               chr6:48327248-48327663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               274
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               171, 75
               

               Conread position:
               10-422
               

               Cow position:
               chr6:13591350-13591777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 25
               

               Conread position:
               10-424
               

               Cow position:
               chr6:17049410-17049843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 8
               

               Conread position:
               10-426
               

               Cow position:
               chr6:7105491-7105062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 8
               

               Conread position:
               10-431
               

               Cow position:
               chr6:53462118-53461705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 132
               

               Conread position:
               11-139
               

               Cow position:
               chr6:25783393-25783269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               11-340
               

               Cow position:
               chr6:65867820-65868169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               11-425
               

               Cow position:
               chr6:20553204-20552772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 225
               

               Conread position:
               11-617
               

               Cow position:
               chr6:24045637-24045016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               634
               

               Alignm identity:
               406
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               12-245
               

               Cow position:
               chr6:45497524-45497290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               128, 133
               

               Conread position:
               12-250
               

               Cow position:
               chr6:18150252-18150001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               63, 91
               

               Conread position:
               12-424
               

               Cow position:
               chr6:11289424-11288997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 18
               

               Conread position:
               13-269
               

               Cow position:
               chr6:22930614-22930344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               128, 47
               

               Conread position:
               13-383
               

               Cow position:
               chr6:7112898-7112510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 196
               

               Conread position:
               13-411
               

               Cow position:
               chr6:3573832-3574241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 122
               

               Conread position:
               13-431
               

               Cow position:
               chr6:2618527-2618088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 117
               

               Conread position:
               13-431
               

               Cow position:
               chr6:11193547-11193104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 107
               

               Conread position:
               13-431
               

               Cow position:
               chr6:47573837-47574265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 375
               

               Conread position:
               13-441
               

               Cow position:
               chr6:52249468-52249026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 27
               

               Conread position:
               16-371
               

               Cow position:
               chr6:12514546-12514905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               153, 64
               

               Conread position:
               16-404
               

               Cow position:
               chr6:18963299-18962915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               50, 40
               

               Conread position:
               16-431
               

               Cow position:
               chr6:35416919-35416499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 66
               

               Conread position:
               17-171
               

               Cow position:
               chr6:43790535-43790379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               17-171
               

               Cow position:
               chr6:58072699-58072853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-244
               

               Cow position:
               chr6:14147245-14147471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 66
               

               Conread position:
               17-338
               

               Cow position:
               chr6:34405344-34405685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               17-355
               

               Cow position:
               chr6:15261308-15261652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               17-359
               

               Cow position:
               chr6:13405271-13405624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               173, 313
               

               Conread position:
               17-410
               

               Cow position:
               chr6:31150510-31150912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               167, 96
               

               Conread position:
               17-422
               

               Cow position:
               chr6:11722159-11721740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 93
               

               Conread position:
               17-431
               

               Cow position:
               chr6:1096696-1096258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               61, 222
               

               Conread position:
               17-431
               

               Cow position:
               chr6:14897223-14897659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 231
               

               Conread position:
               17-431
               

               Cow position:
               chr6:24242333-24242764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 30
               

               Conread position:
               17-453
               

               Cow position:
               chr6:60167516-60167065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 209
               

               Conread position:
               18-424
               

               Cow position:
               chr6:39136546-39136968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 296
               

               Conread position:
               18-431
               

               Cow position:
               chr6:41676978-41677406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               19-415
               

               Cow position:
               chr6:15991892-15991485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 126
               

               Conread position:
               19-431
               

               Cow position:
               chr6:46284054-46283628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 72
               

               Conread position:
               19-438
               

               Cow position:
               chr6:55945380-55944946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 32
               

               Conread position:
               20-336
               

               Cow position:
               chr6:28053608-28053292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               21-171
               

               Cow position:
               chr6:4680639-4680789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               36, 129
               

               Conread position:
               23-406
               

               Cow position:
               chr6:35704472-35704066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 181
               

               Conread position:
               23-424
               

               Cow position:
               chr6:53537124-53537546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               24-171
               

               Cow position:
               chr6:6205730-6205876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               117, 102
               

               Conread position:
               24-431
               

               Cow position:
               chr6:34030331-34030734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 109
               

               Conread position:
               26-346
               

               Cow position:
               chr6:3119490-3119148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 94
               

               Conread position:
               26-391
               

               Cow position:
               chr6:6944887-6944511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 75
               

               Conread position:
               26-431
               

               Cow position:
               chr6:23890061-23889652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 62
               

               Conread position:
               29-166
               

               Cow position:
               chr6:54887797-54887660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-414
               

               Cow position:
               chr6:16410115-16410512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 38
               

               Conread position:
               29-427
               

               Cow position:
               chr6:18804003-18803586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 72
               

               Conread position:
               31-406
               

               Cow position:
               chr6:10598061-10598456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 15
               

               Conread position:
               32-409
               

               Cow position:
               chr6:28518410-28518789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               35-154
               

               Cow position:
               chr6:25437435-25437553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               35-406
               

               Cow position:
               chr6:38988750-38988373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 74
               

               Conread position:
               35-409
               

               Cow position:
               chr6:35724445-35724839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               102, 294
               

               Conread position:
               35-429
               

               Cow position:
               chr6:52240769-52240356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 82
               

               Conread position:
               36-249
               

               Cow position:
               chr6:12090905-12090677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               37-392
               

               Cow position:
               chr6:13314966-13314593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 98
               

               Conread position:
               39-168
               

               Cow position:
               chr6:43585420-43585291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               39-294
               

               Cow position:
               chr6:49963888-49963618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               40-363
               

               Cow position:
               chr6:28844595-28844265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               124, 262
               

               Conread position:
               40-405
               

               Cow position:
               chr6:4274135-4274505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 208
               

               Conread position:
               40-422
               

               Cow position:
               chr6:10681060-10681452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               40-424
               

               Cow position:
               chr6:35873663-35873262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               40-432
               

               Cow position:
               chr6:24624072-24623664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 197
               

               Conread position:
               41-319
               

               Cow position:
               chr6:24126520-24126231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               133, 19
               

               Conread position:
               41-359
               

               Cow position:
               chr6:27939101-27939437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 301
               

               Conread position:
               42-320
               

               Cow position:
               chr6:18497391-18497685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               42-417
               

               Cow position:
               chr6:52557563-52557188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 48
               

               Conread position:
               42-422
               

               Cow position:
               chr6:42988732-42988339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 87
               

               Conread position:
               42-424
               

               Cow position:
               chr6:16644964-16645353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 220
               

               Conread position:
               42-519
               

               Cow position:
               chr6:50113120-50113623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               44-171
               

               Cow position:
               chr6:28112986-28112859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               44-339
               

               Cow position:
               chr6:25180112-25179801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 168
               

               Conread position:
               46-431
               

               Cow position:
               chr6:53810664-53811055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 54
               

               Conread position:
               48-424
               

               Cow position:
               chr6:11401394-11401790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               49-414
               

               Cow position:
               chr6:16674754-16675135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               49-431
               

               Cow position:
               chr6:47539456-47539855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 37
               

               Conread position:
               51-171
               

               Cow position:
               chr6:33996824-33996944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               51-407
               

               Cow position:
               chr6:42420219-42420565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               55, 159
               

               Conread position:
               51-422
               

               Cow position:
               chr6:19718662-19719037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 253
               

               Conread position:
               52-171
               

               Cow position:
               chr6:48875262-48875143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               54-397
               

               Cow position:
               chr6:65909408-65909765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 38
               

               Conread position:
               55-433
               

               Cow position:
               chr6:59596322-59596722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 396
               

               Conread position:
               56-423
               

               Cow position:
               chr6:65011256-65011632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               57-431
               

               Cow position:
               chr6:28157182-28156795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               105, 183
               

               Conread position:
               58-424
               

               Cow position:
               chr6:58595322-58594937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 209
               

               Conread position:
               58-431
               

               Cow position:
               chr6:29484064-29484451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 197
               

               Conread position:
               59-170
               

               Cow position:
               chr6:67252160-67252273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               62-275
               

               Cow position:
               chr6:9587623-9587850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               62-279
               

               Cow position:
               chr6:28399684-28399454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               62-406
               

               Cow position:
               chr6:38802093-38801742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 101
               

               Conread position:
               63-374
               

               Cow position:
               chr6:14264164-14263838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 15
               

               Conread position:
               63-424
               

               Cow position:
               chr6:62960992-62961366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               119, 46
               

               Conread position:
               64-370
               

               Cow position:
               chr6:7176475-7176153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               108, 198
               

               Conread position:
               67-263
               

               Cow position:
               chr6:57228686-57228895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               106, 49
               

               Conread position:
               67-390
               

               Cow position:
               chr6:52066028-52065687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 337
               

               Conread position:
               67-424
               

               Cow position:
               chr6:27094493-27094117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               68-438
               

               Cow position:
               chr6:33896548-33896156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               263
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               14, 175
               

               Conread position:
               71-424
               

               Cow position:
               chr6:56925829-56926203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               71-430
               

               Cow position:
               chr6:17150077-17149699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 284
               

               Conread position:
               74-423
               

               Cow position:
               chr6:48947555-48947190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               87, 42
               

               Conread position:
               76-431
               

               Cow position:
               chr6:16221026-16220684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               85, 77
               

               Conread position:
               76-431
               

               Cow position:
               chr6:44510192-44510567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 5
               

               Conread position:
               78-428
               

               Cow position:
               chr6:29688969-29689332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 55
               

               Conread position:
               78-438
               

               Cow position:
               chr6:19044318-19044681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 167
               

               Conread position:
               79-438
               

               Cow position:
               chr6:6613422-6613778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 12
               

               Conread position:
               80-430
               

               Cow position:
               chr6:21588090-21588460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               80-431
               

               Cow position:
               chr6:1274739-1274377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 170
               

               Conread position:
               82-431
               

               Cow position:
               chr6:6277901-6278264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               56, 12
               

               Conread position:
               85-424
               

               Cow position:
               chr6:55903200-55903558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               90-409
               

               Cow position:
               chr6:40031169-40031489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 63
               

               Conread position:
               90-424
               

               Cow position:
               chr6:8754338-8753985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               90-431
               

               Cow position:
               chr6:46293319-46293002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 61
               

               Conread position:
               90-437
               

               Cow position:
               chr6:6471817-6471454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 186
               

               Conread position:
               92-397
               

               Cow position:
               chr6:67098345-67098663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 110
               

               Conread position:
               93-381
               

               Cow position:
               chr6:24918489-24918200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               102, 71
               

               Conread position:
               93-423
               

               Cow position:
               chr6:33300784-33301137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               93-424
               

               Cow position:
               chr6:45666808-45666464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 60
               

               Conread position:
               94-327
               

               Cow position:
               chr6:12099626-12099876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               94-431
               

               Cow position:
               chr6:4467757-4468098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 54
               

               Conread position:
               95-424
               

               Cow position:
               chr6:43778827-43779161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 63
               

               Conread position:
               98-424
               

               Cow position:
               chr6:1402433-1402094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 263
               

               Conread position:
               98-424
               

               Cow position:
               chr6:1407021-1406682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 263
               

               Conread position:
               98-431
               

               Cow position:
               chr6:32018988-32018627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               64, 19
               

               Conread position:
               102-431
               

               Cow position:
               chr6:55386594-55386930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               88, 27
               

               Conread position:
               103-402
               

               Cow position:
               chr6:44097836-44098153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               61, 139
               

               Conread position:
               107-431
               

               Cow position:
               chr6:65859202-65858878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               68, 51
               

               Conread position:
               107-438
               

               Cow position:
               chr6:22225839-22225497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               153, 5
               

               Conread position:
               108-424
               

               Cow position:
               chr6:508388-508051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               108-424
               

               Cow position:
               chr6:45975633-45975969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               110-424
               

               Cow position:
               chr6:40251661-40251330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 265
               

               Conread position:
               112-416
               

               Cow position:
               chr6:1263300-1263618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 164
               

               Conread position:
               113-431
               

               Cow position:
               chr6:12388315-12387985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 114
               

               Conread position:
               116-431
               

               Cow position:
               chr6:51876907-51877232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 130
               

               Conread position:
               118-350
               

               Cow position:
               chr6:53742084-53742315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               125-425
               

               Cow position:
               chr6:2111248-2110929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 127
               

               Conread position:
               127-431
               

               Cow position:
               chr6:57383569-57383893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               46, 212
               

               Conread position:
               130-424
               

               Cow position:
               chr6:11389449-11389144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               152-431
               

               Cow position:
               chr6:65941818-65941532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 50
               

               Conread position:
               159-306
               

               Cow position:
               chr6:65860571-65860720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               159-424
               

               Cow position:
               chr6:3987861-3987586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               162-424
               

               Cow position:
               chr6:54887393-54887123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               164-389
               

               Cow position:
               chr6:1109210-1109442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               164-406
               

               Cow position:
               chr6:27887115-27887363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               164-425
               

               Cow position:
               chr6:50801435-50801174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 102
               

               Conread position:
               164-431
               

               Cow position:
               chr6:17344401-17344676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 227
               

               Conread position:
               165-288
               

               Cow position:
               chr6:8951056-8950932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               165-409
               

               Cow position:
               chr6:28135956-28136205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 106
               

               Conread position:
               165-424
               

               Cow position:
               chr6:7215999-7216261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 243
               

               Conread position:
               165-424
               

               Cow position:
               chr6:7448699-7448965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               165-424
               

               Cow position:
               chr6:18912530-18912265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 190
               

               Conread position:
               165-424
               

               Cow position:
               chr6:20268110-20267846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               165-424
               

               Cow position:
               chr6:20581572-20581306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               165-424
               

               Cow position:
               chr6:45901790-45901523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 231
               

               Conread position:
               165-424
               

               Cow position:
               chr6:46225758-46225495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 170
               

               Conread position:
               165-424
               

               Cow position:
               chr6:48881949-48882213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 194
               

               Conread position:
               165-424
               

               Cow position:
               chr6:55361591-55361325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               165-431
               

               Cow position:
               chr6:9322205-9322480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               165-431
               

               Cow position:
               chr6:51673974-51674243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               165-431
               

               Cow position:
               chr6:54472443-54472175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               15, 183
               

               Conread position:
               168-430
               

               Cow position:
               chr6:5096598-5096336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 72
               

               Conread position:
               169-410
               

               Cow position:
               chr6:50526719-50526964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               172-424
               

               Cow position:
               chr6:54358307-54358055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               29, 65
               

               Conread position:
               174-289
               

               Cow position:
               chr6:3445828-3445712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               174-406
               

               Cow position:
               chr6:17773199-17773438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               174-422
               

               Cow position:
               chr6:63041116-63040865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               174-424
               

               Cow position:
               chr6:12971609-12971866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               175-424
               

               Cow position:
               chr6:57329492-57329748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               176-395
               

               Cow position:
               chr6:10252420-10252643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               63, 39
               

               Conread position:
               176-424
               

               Cow position:
               chr6:653582-653328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 250
               

               Conread position:
               176-424
               

               Cow position:
               chr6:32664887-32664631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               176-424
               

               Cow position:
               chr6:63715061-63714806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               180-415
               

               Cow position:
               chr6:34017503-34017261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               182-402
               

               Cow position:
               chr6:41233145-41233370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               182-424
               

               Cow position:
               chr6:20216175-20215926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               191-409
               

               Cow position:
               chr6:57473492-57473716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               194-353
               

               Cow position:
               chr6:52000986-52001149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 56
               

               Conread position:
               194-423
               

               Cow position:
               chr6:34548268-34548498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               194-430
               

               Cow position:
               chr6:25783180-25782938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               100, 164
               

               Conread position:
               199-391
               

               Cow position:
               chr6:28010483-28010290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               200-431
               

               Cow position:
               chr6:47025292-47025529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               15, 191
               

               Conread position:
               201-395
               

               Cow position:
               chr6:58072906-58073105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 117
               

               Conread position:
               201-409
               

               Cow position:
               chr6:25408448-25408241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               107, 36
               

               Conread position:
               201-413
               

               Cow position:
               chr6:45618351-45618125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               203-431
               

               Cow position:
               chr6:58036525-58036760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 23
               

               Conread position:
               204-409
               

               Cow position:
               chr6:67256765-67256968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               207-422
               

               Cow position:
               chr6:42897434-42897655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               208-400
               

               Cow position:
               chr6:32419519-32419720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               208-422
               

               Cow position:
               chr6:40319511-40319723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               89, 7
               

               Conread position:
               208-424
               

               Cow position:
               chr6:1245673-1245451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               208-424
               

               Cow position:
               chr6:8382187-8382409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               208-424
               

               Cow position:
               chr6:37216891-37217109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               88, 35
               

               Conread position:
               208-424
               

               Cow position:
               chr6:39897815-39897593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               208-424
               

               Cow position:
               chr6:43790120-43789898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               208-424
               

               Cow position:
               chr6:48873076-48872854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               208-424
               

               Cow position:
               chr6:62333501-62333278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               208-431
               

               Cow position:
               chr6:19059526-19059749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               209-424
               

               Cow position:
               chr6:39080166-39080387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               209-424
               

               Cow position:
               chr6:52696833-52697059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               209-424
               

               Cow position:
               chr6:66234590-66234813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 149
               

               Conread position:
               210-294
               

               Cow position:
               chr6:41104096-41104180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               75
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               213-425
               

               Cow position:
               chr6:53739541-53739762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               213-431
               

               Cow position:
               chr6:33922152-33921921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               216-308
               

               Cow position:
               chr6:43339513-43339421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               217-338
               

               Cow position:
               chr6:61632390-61632516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               217-424
               

               Cow position:
               chr6:57585223-57585013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               217-430
               

               Cow position:
               chr6:3016369-3016587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               218-329
               

               Cow position:
               chr6:48825971-48825855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               218-335
               

               Cow position:
               chr6:14064439-14064317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               218-431
               

               Cow position:
               chr6:56842279-56842500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               218-438
               

               Cow position:
               chr6:2581861-2582087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               75, 198
               

               Conread position:
               219-350
               

               Cow position:
               chr6:63210348-63210484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               219-431
               

               Cow position:
               chr6:27858726-27858934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               179, 67
               

               Conread position:
               222-400
               

               Cow position:
               chr6:15030272-15030087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               222-424
               

               Cow position:
               chr6:54900354-54900559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 11
               

               Conread position:
               222-430
               

               Cow position:
               chr6:1887534-1887315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               223-401
               

               Cow position:
               chr6:59603562-59603377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               39, 180
               

               Conread position:
               223-424
               

               Cow position:
               chr6:28112577-28112368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               223-430
               

               Cow position:
               chr6:7191349-7191138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               223-431
               

               Cow position:
               chr6:12629217-12629427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               224-401
               

               Cow position:
               chr6:11161124-11160942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 92
               

               Conread position:
               224-403
               

               Cow position:
               chr6:27942093-27942275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               70, 121
               

               Conread position:
               224-422
               

               Cow position:
               chr6:49392077-49391873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               224-424
               

               Cow position:
               chr6:26829791-26829997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               224-424
               

               Cow position:
               chr6:45723858-45723655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               224-429
               

               Cow position:
               chr6:6340287-6340498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 50
               

               Conread position:
               227-402
               

               Cow position:
               chr6:50624698-50624876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 162
               

               Conread position:
               227-402
               

               Cow position:
               chr6:54376829-54377008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 11
               

               Conread position:
               227-431
               

               Cow position:
               chr6:55169751-55169950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 73
               

               Conread position:
               228-400
               

               Cow position:
               chr6:66751040-66751214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               77, 46
               

               Conread position:
               228-430
               

               Cow position:
               chr6:57681262-57681053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               228-447
               

               Cow position:
               chr6:37761522-37761741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 88
               

               Conread position:
               230-366
               

               Cow position:
               chr6:6838849-6838984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               232-424
               

               Cow position:
               chr6:14199317-14199515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               233-409
               

               Cow position:
               chr6:6524971-6525147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               144, 36
               

               Conread position:
               233-431
               

               Cow position:
               chr6:39092890-39093092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 170
               

               Conread position:
               234-422
               

               Cow position:
               chr6:6601632-6601443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               77, 184
               

               Conread position:
               234-430
               

               Cow position:
               chr6:45065880-45065685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               55, 60
               

               Conread position:
               234-431
               

               Cow position:
               chr6:539411-539614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               235-415
               

               Cow position:
               chr6:27816308-27816133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               100, 29
               

               Conread position:
               236-431
               

               Cow position:
               chr6:68047642-68047442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               160
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               58, 119
               

               Conread position:
               238-424
               

               Cow position:
               chr6:8535516-8535328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               155
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               239-424
               

               Cow position:
               chr6:38873249-38873058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               239-431
               

               Cow position:
               chr6:25822911-25822720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               55, 160
               

               Conread position:
               241-430
               

               Cow position:
               chr6:27869487-27869683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               242-414
               

               Cow position:
               chr6:2606747-2606924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 151
               

               Conread position:
               243-424
               

               Cow position:
               chr6:227445-227625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               43, 54
               

               Conread position:
               244-431
               

               Cow position:
               chr6:58915052-58914861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 125
               

               Conread position:
               246-422
               

               Cow position:
               chr6:366347-366518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               247-429
               

               Cow position:
               chr6:32269962-32269783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               41, 47
               

               Conread position:
               247-431
               

               Cow position:
               chr6:67186828-67187019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               249-431
               

               Cow position:
               chr6:35884100-35884285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               45, 119
               

               Conread position:
               250-431
               

               Cow position:
               chr6:47382885-47383062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               41, 123
               

               Conread position:
               251-424
               

               Cow position:
               chr6:10536688-10536509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               254-431
               

               Cow position:
               chr6:49442237-49442419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               43, 7
               

               Conread position:
               255-401
               

               Cow position:
               chr6:8932462-8932325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               139, 41
               

               Conread position:
               255-409
               

               Cow position:
               chr6:42616799-42616950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               255-424
               

               Cow position:
               chr6:38917745-38917570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               256-427
               

               Cow position:
               chr6:42481177-42481354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               257-405
               

               Cow position:
               chr6:10602738-10602584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               40, 137
               

               Conread position:
               257-424
               

               Cow position:
               chr6:13494791-13494623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               257-431
               

               Cow position:
               chr6:3982188-3982379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               257-431
               

               Cow position:
               chr6:41409900-41410078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               262-427
               

               Cow position:
               chr6:28487345-28487188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               137, 28
               

               Conread position:
               263-431
               

               Cow position:
               chr6:32271902-32271733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               268-430
               

               Cow position:
               chr6:7175344-7175176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 70
               

               Conread position:
               268-431
               

               Cow position:
               chr6:56442169-56441999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               268-431
               

               Cow position:
               chr6:67213684-67213851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               33, 59
               

               Conread position:
               272-424
               

               Cow position:
               chr6:45856937-45857095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               273-424
               

               Cow position:
               chr6:28400958-28401115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               273-424
               

               Cow position:
               chr6:54979216-54979059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               278-431
               

               Cow position:
               chr6:16699455-16699611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               24, 97
               

               Conread position:
               286-431
               

               Cow position:
               chr6:47977265-47977411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               113, 7
               

               Conread position:
               286-431
               

               Cow position:
               chr6:47988256-47988404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               287-424
               

               Cow position:
               chr6:444595-444458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 24
               

               Conread position:
               293-415
               

               Cow position:
               chr6:18969839-18969719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               293-431
               

               Cow position:
               chr6:2545531-2545667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               293-431
               

               Cow position:
               chr6:6200669-6200806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               293-431
               

               Cow position:
               chr6:39997747-39997608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               294-424
               

               Cow position:
               chr6:50446994-50446868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               295-424
               

               Cow position:
               chr6:57308564-57308694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               295-431
               

               Cow position:
               chr6:43393241-43393373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               295-431
               

               Cow position:
               chr6:65930566-65930702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               104, 123
               

               Conread position:
               298-416
               

               Cow position:
               chr6:1817666-1817551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               298-421
               

               Cow position:
               chr6:3445470-3445347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               298-422
               

               Cow position:
               chr6:65921430-65921306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               298-424
               

               Cow position:
               chr6:41495494-41495367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               299-431
               

               Cow position:
               chr6:40139940-40139809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               300-431
               

               Cow position:
               chr6:54491592-54491460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               305-430
               

               Cow position:
               chr6:32125295-32125422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               310-431
               

               Cow position:
               chr6:24126048-24125926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               320-431
               

               Cow position:
               chr6:24988406-24988518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-106
Cow position:	chr6:25217981-25218085 (view UCSC Genome Browser custom track)
Alignm length:	106
Alignm identity:	86
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	17, 0
Conread position:	1-113
Cow position:	chr6:45591576-45591687 (view UCSC Genome Browser custom track)
Alignm length:	113
Alignm identity:	91
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	18, 0
Conread position:	1-116
Cow position:	chr6:13490973-13490859 (view UCSC Genome Browser custom track)
Alignm length:	116
Alignm identity:	92
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	18, 0
Conread position:	1-126
Cow position:	chr6:27761730-27761854 (view UCSC Genome Browser custom track)
Alignm length:	126
Alignm identity:	103
Alignm E-value:	8e-28
Alignm gaps (pig, cow):	18, 0
Conread position:	1-131
Cow position:	chr6:59710758-59710887 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	106
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	18, 0
Conread position:	1-139
Cow position:	chr6:1888410-1888273 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	114
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	18, 0
Conread position:	1-140
Cow position:	chr6:1818771-1818634 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	117
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	17, 0
Conread position:	1-144
Cow position:	chr6:52696664-52696801 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	115
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	18, 0
Conread position:	1-146
Cow position:	chr6:62577154-62577010 (view UCSC Genome Browser custom track)
Alignm length:	146
Alignm identity:	117
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	20, 0
Conread position:	1-149
Cow position:	chr6:17927451-17927598 (view UCSC Genome Browser custom track)
Alignm length:	149
Alignm identity:	121
Alignm E-value:	5e-34
Alignm gaps (pig, cow):	18, 0
Conread position:	1-156
Cow position:	chr6:11829608-11829451 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	128
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	85, 17
Conread position:	1-165
Cow position:	chr6:39897978-39898141 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	132
Alignm E-value:	7e-37
Alignm gaps (pig, cow):	18, 0
Conread position:	1-167
Cow position:	chr6:45279965-45280130 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	126
Alignm E-value:	8e-28
Alignm gaps (pig, cow):	130, 17
Conread position:	1-170
Cow position:	chr6:48544-48376 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	139
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	7, 0
Conread position:	1-171
Cow position:	chr6:8536267-8536098 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	138
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	122, 17
Conread position:	1-172
Cow position:	chr6:14840854-14841029 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	144
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	52, 18
Conread position:	1-181
Cow position:	chr6:28476099-28476275 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	140
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	112, 17
Conread position:	1-186
Cow position:	chr6:49165574-49165390 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	111
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	17, 0
Conread position:	1-214
Cow position:	chr6:2581426-2581655 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	176
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	100, 17
Conread position:	1-240
Cow position:	chr6:21975980-21976219 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	179
Alignm E-value:	3.99931e-42
Alignm gaps (pig, cow):	187, 17